Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0400 Trochodendron aralioides HOM05D004700 ORTHO05D005576 7.2e-143 510.8 296 100.0
Nn6g34422 Nelumbo nucifera HOM05D004700 ORTHO05D005576 9.2e-106 387.5 280 79.3
Lj1A824T63 Lonicera japonica HOM05D004700 ORTHO05D005576 4.6e-105 385.2 282 79.1
vmacro11972 Vaccinium macrocarpon HOM05D004700 ORTHO05D005576 1.9e-103 379.8 281 81.5
Prupe.4G156500 Prunus persica HOM05D004700 ORTHO05D005576 3.3e-103 379.0 279 77.8
Actinidia03618 Actinidia chinensis HOM05D004700 ORTHO05D005576 4.3e-103 378.6 282 81.9
Haze_09248 Corylus avellana HOM05D004700 ORTHO05D005576 4.3e-103 378.6 279 81.7
Manes.15G098600 Manihot esculenta HOM05D004700 ORTHO05D005576 8.1e-102 374.4 281 76.9
Atru.chr2.1968 Acer truncatum HOM05D004700 ORTHO05D005576 1.1e-101 374.0 281 81.5
Atru.chr2.1937 Acer truncatum HOM05D004700 ORTHO05D005576 3.1e-101 372.5 281 81.1
CSS0040857 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 4.0e-101 372.1 278 80.9
QL08p024163 Quercus lobata HOM05D004700 ORTHO05D005576 6.8e-101 371.3 280 77.1
Hma1.2p1_0325F.1_g125830 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 1.5e-100 370.2 285 80.7
Sabra11G0081100 Salix brachista HOM05D004700 ORTHO05D005576 1.5e-100 370.2 280 80.4
Solyc08g015770.4 Solanum lycopersicum HOM05D004700 ORTHO05D005576 2.6e-100 369.4 280 81.1
Potri.011G104500 Populus trichocarpa HOM05D004700 ORTHO05D005576 5.8e-100 368.2 281 79.4
CAN.G68.2 Capsicum annuum HOM05D004700 ORTHO05D005576 1.4e-98 363.6 282 79.4
GSVIVG01014096001 Vitis vinifera HOM05D004700 ORTHO05D005576 1.9e-98 363.2 279 78.9
Ciclev10016084m.g Citrus clementina HOM05D004700 ORTHO05D005576 2.4e-98 362.8 279 78.9
CiPaw.12G110800 Carya illinoinensis HOM05D004700 ORTHO05D005576 1.0e-96 357.5 279 78.5
Eucgr.F03234 Eucalyptus grandis HOM05D004700 ORTHO05D005576 1.0e-96 357.5 279 78.5
Actinidia12604 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.7e-96 356.7 294 72.4
Hma1.2p1_0050F.1_g028780 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 2.3e-96 356.3 279 73.8
MELO3C016116.2 Cucumis melo HOM05D004700 ORTHO05D005576 3.9e-96 355.5 280 75.0
Cc05_g10710 Coffea canephora HOM05D004700 ORTHO05D005576 8.6e-96 354.4 283 76.7
MBI06_g08516_MAGBIO Magnolia biondii HOM05D004700 ORTHO05D005576 1.1e-95 354.0 287 77.0
CiPaw.11G155900 Carya illinoinensis HOM05D004700 ORTHO05D005576 2.5e-95 352.8 279 77.8
DCAR_013348 Daucus carota HOM05D004700 ORTHO05D005576 3.3e-95 352.4 284 78.9
EL10Ac4g08417 Beta vulgaris HOM05D004700 ORTHO05D005576 7.3e-95 351.3 279 75.3
Glyma.15G209600 Glycine max HOM05D004700 ORTHO05D005576 9.6e-95 350.9 281 70.8
Oeu050672.1 Olea europaea HOM05D004700 ORTHO05D005576 9.6e-95 350.9 284 74.6
Manes.03G079300 Manihot esculenta HOM05D004700 ORTHO05D005576 1.6e-94 350.1 281 79.0
HanXRQChr15g0492381 Helianthus annuus HOM05D004700 ORTHO05D005576 2.8e-94 349.4 290 75.9
PGR031G0266 Punica granatum HOM05D004700 ORTHO05D005576 3.6e-94 349.0 280 78.6
Phvul.011G168700 Phaseolus vulgaris HOM05D004700 ORTHO05D005576 4.7e-94 348.6 281 64.1
Sc03g0010710 Simmondsia chinensis HOM05D004700 ORTHO05D005576 4.7e-94 348.6 280 76.4
Sopen08g005940 Solanum pennellii HOM05D004700 ORTHO05D005576 1.4e-93 347.1 280 77.9
Lalb_Chr19g0133711 Lupinus albus HOM05D004700 ORTHO05D005576 1.8e-93 346.7 281 65.5
Duzib213G0278 Durio zibethinus HOM05D004700 ORTHO05D005576 3.1e-93 345.9 280 78.2
Thecc.07G132900 Theobroma cacao HOM05D004700 ORTHO05D005576 6.9e-93 344.7 280 77.1
Rhsim06G0211800 Rhododendron simsii HOM05D004700 ORTHO05D005576 1.2e-92 344.0 284 77.5
THA.LOC104822577 Tarenaya hassleriana HOM05D004700 ORTHO05D005576 9.9e-92 340.9 283 63.6
Glyma.09G099300 Glycine max HOM05D004700 ORTHO05D005576 1.3e-91 340.5 281 74.4
PSO675G6346 Papaver somniferum HOM05D004700 ORTHO05D005576 1.3e-91 340.5 282 75.2
Potri.001G383900 Populus trichocarpa HOM05D004700 ORTHO05D005576 2.2e-91 339.7 287 77.4
TWI38G0400 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 2.2e-91 339.7 283 72.4
RhsimUnG0206700 Rhododendron simsii HOM05D004700 ORTHO05D005576 8.4e-91 337.8 309 69.6
CSS0048020 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 1.1e-90 337.4 255 82.0
CSS0037390 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 1.4e-90 337.0 255 82.0
Nitab4.5_0000348g0050 Nicotiana tabacum HOM05D004700 ORTHO05D005576 2.4e-90 336.3 280 77.5
Nitab4.5_0012258g0020 Nicotiana tabacum HOM05D004700 ORTHO05D005576 3.2e-90 335.9 279 77.8
TPR.G16482 Trifolium pratense HOM05D004700 ORTHO05D005576 5.4e-90 335.1 281 62.6
ATR0602G050 Amborella trichopoda HOM05D004700 ORTHO05D005576 7.1e-90 334.7 293 71.0
Medtr8g054400 Medicago truncatula HOM05D004700 ORTHO05D005576 7.1e-90 334.7 275 63.3
PSO541G3766 Papaver somniferum HOM05D004700 ORTHO05D005576 1.6e-89 333.6 280 71.8
Gorai.007G331800 Gossypium raimondii HOM05D004700 ORTHO05D005576 2.7e-89 332.8 283 62.5
Hund08843 Selenicereus undatus HOM05D004700 ORTHO05D005576 2.7e-89 332.8 281 74.0
TWI38G0408 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 2.7e-89 332.8 280 64.3
ECA236G3615 Erigeron canadensis HOM05D004700 ORTHO05D005576 3.5e-89 332.4 315 60.3
AL1G62040 Arabidopsis lyrata HOM05D004700 ORTHO05D005576 4.6e-89 332.0 284 65.8
CANSAT56G3173 Cannabis sativa HOM05D004700 ORTHO05D005576 7.8e-89 331.3 284 59.5
CsaV3_4G008200 Cucumis sativus L. HOM05D004700 ORTHO05D005576 7.8e-89 331.3 281 72.6
Aa31LG10G1720 Aethionema arabicum HOM05D004700 ORTHO05D005576 1.3e-88 330.5 283 67.5
Actinidia39420 Actinidia chinensis HOM05D004700 ORTHO05D005576 2.3e-88 329.7 285 68.4
Sed0011117 Sechium edule HOM05D004700 ORTHO05D005576 2.3e-88 329.7 281 73.3
AT1G53490 Arabidopsis thaliana HOM05D004700 ORTHO05D005576 8.7e-88 327.8 284 65.5
Carub.0001s4267 Capsella rubella HOM05D004700 ORTHO05D005576 1.5e-87 327.0 284 65.1
MD03G1247600 Malus domestica HOM05D004700 ORTHO05D005576 1.5e-87 327.0 280 70.0
Sabra11G0076400 Salix brachista HOM05D004700 ORTHO05D005576 2.5e-87 326.2 262 77.5
Sp1g40020 Schrenkiella parvula HOM05D004700 ORTHO05D005576 3.3e-87 325.9 284 65.1
Thhalv10011691m.g Eutrema salsugineum HOM05D004700 ORTHO05D005576 4.3e-87 325.5 284 64.8
Lj3g0009226 Lotus japonicus HOM05D004700 ORTHO05D005576 1.6e-86 323.6 280 63.9
Migut.H02024 Erythranthe guttata HOM05D004700 ORTHO05D005576 8.1e-86 321.2 285 63.5
Gohir.D11G302900 Gossypium hirsutum HOM05D004700 ORTHO05D005576 2.6e-84 316.2 283 60.8
SGA_v2.0_scaffold181G39765 Striga asiatica HOM05D004700 ORTHO05D005576 2.6e-84 316.2 287 71.4
Sabra16G0252900 Salix brachista HOM05D004700 ORTHO05D005576 2.9e-83 312.8 313 68.7
BcaC01g01394 Brassica carinata HOM05D004700 ORTHO05D005576 4.9e-83 312.0 285 61.1
Gohir.A11G289500 Gossypium hirsutum HOM05D004700 ORTHO05D005576 6.4e-83 311.6 283 59.7
Dinv26707 Davidia involucrata HOM05D004700 ORTHO05D005576 8.4e-83 311.2 280 73.6
BolC3t21472H Brassica oleracea HOM05D004700 ORTHO05D005576 1.1e-82 310.8 284 60.9
CARHR043720 Cardamine hirsuta HOM05D004700 ORTHO05D005576 3.2e-82 309.3 286 62.9
C03p91550 Brassica napus HOM05D004700 ORTHO05D005576 7.1e-82 308.1 284 60.6
VMungo1127G0687 Vigna mungo HOM05D004700 ORTHO05D005576 9.3e-82 307.8 260 61.2
Os02g0232100 Oryza sativa ssp. japonica HOM05D004700 ORTHO05D005576 1.6e-81 307.0 280 61.8
Cfa019516 Carpinus fangiana HOM05D004700 ORTHO05D005576 1.3e-80 303.9 241 79.7
BcaC08g43535 Brassica carinata HOM05D004700 ORTHO05D005576 8.7e-80 301.2 294 65.0
Nitab4.5_0000092g0360 Nicotiana tabacum HOM05D004700 ORTHO05D005576 2.5e-79 299.7 262 61.5
A05p18220 Brassica napus HOM05D004700 ORTHO05D005576 2.1e-78 296.6 283 58.3
ClCG07G010130 Citrullus lanatus HOM05D004700 ORTHO05D005576 4.8e-78 295.4 281 57.7
FAN11G3801 Fragaria x ananassa HOM05D004700 ORTHO05D005576 4.8e-78 295.4 292 64.7
FAN16G2451 Fragaria x ananassa HOM05D004700 ORTHO05D005576 4.8e-78 295.4 294 64.3
BcaB07g33326 Brassica carinata HOM05D004700 ORTHO05D005576 6.9e-77 291.6 284 57.0
BcaB02g10917 Brassica carinata HOM05D004700 ORTHO05D005576 2.0e-76 290.0 286 66.1
Psat4g157000 Pisum sativum HOM05D004700 ORTHO05D005576 4.5e-76 288.9 281 59.8
RcHm_v2.0_Chr5g0029521 Rosa chinensis HOM05D004700 ORTHO05D005576 6.4e-75 285.0 279 66.7
PGSC0003DMG400013718 Solanum tuberosum HOM05D004700 ORTHO05D005576 1.1e-74 284.3 232 80.2
Ca_22302_v3 Cicer arietinum L. HOM05D004700 ORTHO05D005576 2.4e-74 283.1 280 54.6
FvH4_3g17740 Fragaria vesca HOM05D004700 ORTHO05D005576 3.2e-74 282.7 279 67.4
unitig_746.g26835 Utricularia gibba HOM05D004700 ORTHO05D005576 4.2e-74 282.3 284 55.6
Zm00001eb239370 Zea mays HOM05D004700 ORTHO05D005576 5.5e-74 282.0 281 54.1
A06p00990 Brassica napus HOM05D004700 ORTHO05D005576 7.1e-74 281.6 331 55.3
BraA06t23327Z Brassica rapa HOM05D004700 ORTHO05D005576 7.1e-74 281.6 331 55.3
CDE06G2539 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 3.5e-73 279.3 243 73.7
arahy.Tifrunner.gnm1.ann1.7PP38G Arachis hypogaea HOM05D004700 ORTHO05D005576 3.9e-72 275.8 239 73.6
COL.COLO4_17473 Corchorus olitorius HOM05D004700 ORTHO05D005576 6.7e-72 275.0 232 63.4
MD11G1269900 Malus domestica HOM05D004700 ORTHO05D005576 1.9e-71 273.5 287 59.6
arahy.Tifrunner.gnm1.ann1.DP9AR5 Arachis hypogaea HOM05D004700 ORTHO05D005576 1.3e-70 270.8 248 70.2
AUR62039578 Chenopodium quinoa HOM05D004700 ORTHO05D005576 2.1e-70 270.0 231 73.6
BraA08t32208Z Brassica rapa HOM05D004700 ORTHO05D005576 1.4e-69 267.3 284 54.2
AUR62019650 Chenopodium quinoa HOM05D004700 ORTHO05D005576 1.8e-69 266.9 231 73.2
DCAR_021040 Daucus carota HOM05D004700 ORTHO05D005576 5.8e-68 261.9 239 75.7
C06p09250 Brassica napus HOM05D004700 ORTHO05D005576 7.6e-68 261.5 325 56.6
BolC6t36002H Brassica oleracea HOM05D004700 ORTHO05D005576 7.6e-68 261.5 325 56.6
Lsat_1_v5_gn_7_101801 Lactuca sativa HOM05D004700 ORTHO05D005576 1.7e-67 260.4 302 51.3
Cpa.g.sc77.62 Carica papaya HOM05D004700 ORTHO05D005576 2.2e-67 260.0 232 60.3
BraA08t32205Z Brassica rapa HOM05D004700 ORTHO05D005576 3.8e-67 259.2 281 53.4
Aqoxy1G01902 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 4.9e-67 258.8 191 83.8
Peaxi162Scf00111g01325 Petunia axillaris HOM05D004700 ORTHO05D005576 8.4e-67 258.1 249 58.2
Sed0005766 Sechium edule HOM05D004700 ORTHO05D005576 3.3e-63 246.1 188 81.9
Ah.06g187700 Amaranthus hybridus HOM05D004700 ORTHO05D005576 4.3e-63 245.7 234 71.8
Peaxi162Scf00000g00759 Petunia axillaris HOM05D004700 ORTHO05D005576 9.6e-63 244.6 232 73.3
MSTRG.12860 Avicennia marina HOM05D004700 ORTHO05D005576 2.1e-62 243.4 237 56.1
Ah.04g164030 Amaranthus hybridus HOM05D004700 ORTHO05D005576 3.4e-60 236.1 230 68.3
BcaB04g17077 Brassica carinata HOM05D004700 ORTHO05D005576 9.7e-55 218.0 272 48.9
CDE02G3773 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 2.8e-54 216.5 282 46.5
Dinv13363 Davidia involucrata HOM05D004700 ORTHO05D005576 2.6e-52 209.9 164 88.4
FAN25G1946 Fragaria x ananassa HOM05D004700 ORTHO05D005576 5.0e-51 205.7 243 63.4
Sabra11G0075900 Salix brachista HOM05D004700 ORTHO05D005576 6.5e-51 205.3 189 77.2
BcaC08g44093 Brassica carinata HOM05D004700 ORTHO05D005576 3.6e-49 199.5 242 50.8
C06p14980 Brassica napus HOM05D004700 ORTHO05D005576 2.0e-47 193.7 234 50.9
BolC6t36675H Brassica oleracea HOM05D004700 ORTHO05D005576 2.0e-47 193.7 234 50.9
Sc07g0002390 Simmondsia chinensis HOM05D004700 ORTHO05D005576 2.6e-44 183.3 146 78.8
Oeu010032.1 Olea europaea HOM05D004700 ORTHO05D005576 1.4e-42 177.6 227 47.1
Sabra11G0075500 Salix brachista HOM05D004700 ORTHO05D005576 4.7e-41 172.6 149 81.2
BraA05t20718Z Brassica rapa HOM05D004700 ORTHO05D005576 7.9e-41 171.8 104 81.7
Sabra11G0076300 Salix brachista HOM05D004700 ORTHO05D005576 8.8e-40 168.3 181 52.5
Sabra11G0075300 Salix brachista HOM05D004700 ORTHO05D005576 6.5e-35 152.1 162 55.6
SEGI_00597 Sequoiadendron giganteum HOM05D004700 ORTHO05D005576 6.5e-35 152.1 245 42.0
Mapoly0001s0250 Marchantia polymorpha HOM05D004700 ORTHO05D005576 2.3e-32 143.7 297 46.1
Gorai.002G047100 Gossypium raimondii HOM05D004700 ORTHO05D005576 1.5e-31 141.0 219 52.5
AagrBONN_evm.TU.Sc2ySwM_362.885 Anthoceros agrestis HOM05D004700 ORTHO05D005576 2.8e-30 136.7 219 56.2
Aqoxy1G01901 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 3.2e-26 123.2 92 69.6
Gohir.D01G038350 Gossypium hirsutum HOM05D004700 ORTHO05D005576 3.6e-25 119.8 157 63.1
Actinidia04620 Actinidia chinensis HOM05D004700 ORTHO05D005576 8.0e-25 118.6 166 43.4
Pp3c8_15890 Physcomitrium patens HOM05D004700 ORTHO05D005576 2.6e-23 113.6 295 31.2
Actinidia04619 Actinidia chinensis HOM05D004700 ORTHO05D005576 4.2e-18 96.3 49 89.8
Ah.06g187690 Amaranthus hybridus HOM05D004700 ORTHO05D000031 1.3e-14 84.7 45 80.0
Zm00001eb364990 Zea mays HOM05D001185 ORTHO05D005576 2.8e-14 83.6 98 50.0
Zm00001eb337320 Zea mays HOM05D004700 ORTHO05D005576 3.7e-14 83.2 106 45.3
Zm00001eb164550 Zea mays HOM05D004700 ORTHO05D005576 8.3e-14 82.0 47 76.6
Sc07g0002380 Simmondsia chinensis HOM05D004700 ORTHO05D005576 3.1e-13 80.1 101 48.5
Nitab4.5_0000244g0440 Nicotiana tabacum HOM05D000856 ORTHO05D001792 5.4e-13 79.3 69 62.3
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 3.8e-11 73.2 45 77.8
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 3.8e-11 73.2 45 77.8
Zm00001eb046150 Zea mays HOM05D004700 ORTHO05D005576 9.5e-10 68.6 38 76.3
Peaxi162Scf00000g00758 Petunia axillaris HOM05D004700 ORTHO05D005576 1.5e-07 61.2 99 38.4
Cre03.g161500 Chlamydomonas reinhardtii HOM05D004700 ORTHO05D005576 2.9e-06 57.0 101 28.7


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