Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 9.2e-60 233.4 122 100.0
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.9e-37 158.7 110 69.1
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 8.9e-31 137.1 97 68.0
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.8e-30 134.4 100 65.0
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.3e-29 133.3 100 64.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 2.2e-29 132.5 97 63.9
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 2.9e-29 132.1 97 70.1
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 8.4e-29 130.6 97 69.1
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.1e-28 130.2 98 62.2
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.1e-28 130.2 100 62.0
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 1.9e-28 129.4 100 61.0
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 1.9e-28 129.4 100 61.0
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 1.9e-28 129.4 100 61.0
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 5.4e-28 127.9 99 70.7
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 5.4e-28 127.9 97 63.9
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 5.4e-28 127.9 99 63.6
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.6e-27 126.3 100 67.0
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 2.1e-27 125.9 107 60.7
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.7e-27 125.6 96 62.5
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.7e-27 125.6 96 62.5
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.7e-27 125.6 96 62.5
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 3.5e-27 125.2 97 58.8
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 4.6e-27 124.8 96 61.5
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.0e-27 124.4 104 62.5
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.0e-27 124.4 104 62.5
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.0e-27 124.4 104 62.5
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 7.8e-27 124.0 100 63.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 7.8e-27 124.0 97 60.8
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 7.8e-27 124.0 97 60.8
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.0e-26 123.6 99 63.6
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.0e-26 123.6 96 61.5
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.3e-26 123.2 104 59.6
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.7e-26 122.9 97 68.0
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.0e-26 122.1 96 59.4
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 3.9e-26 121.7 100 62.0
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 5.1e-26 121.3 96 60.4
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 5.1e-26 121.3 97 60.8
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 5.1e-26 121.3 96 59.4
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.1e-26 121.3 105 60.0
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 6.6e-26 120.9 100 61.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 6.6e-26 120.9 104 62.5
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.6e-26 120.9 98 62.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.1e-25 120.2 108 58.3
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 1.1e-25 120.2 97 59.8
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-25 119.8 100 59.0
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-25 119.8 100 59.0
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.9e-25 119.4 100 59.0
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.9e-25 119.4 100 59.0
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.9e-25 119.4 96 69.8
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 3.3e-25 118.6 97 59.8
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 3.3e-25 118.6 96 56.2
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 4.3e-25 118.2 102 54.9
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 4.3e-25 118.2 102 54.9
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.3e-25 118.2 97 60.8
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 4.3e-25 118.2 97 58.8
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 5.6e-25 117.9 96 59.4
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 5.6e-25 117.9 98 60.2
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 7.3e-25 117.5 98 62.2
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 9.6e-25 117.1 96 59.4
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 9.6e-25 117.1 96 59.4
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 9.6e-25 117.1 97 59.8
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 9.6e-25 117.1 98 59.2
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.6e-24 116.3 96 56.2
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.6e-24 116.3 97 56.7
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 2.1e-24 115.9 96 58.3
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 2.1e-24 115.9 96 58.3
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 2.8e-24 115.5 98 58.2
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 4.8e-24 114.8 98 59.2
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 4.8e-24 114.8 98 59.2
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 4.8e-24 114.8 96 57.3
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 4.8e-24 114.8 98 59.2
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 6.2e-24 114.4 96 58.3
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 6.2e-24 114.4 96 58.3
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 6.2e-24 114.4 99 56.6
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 6.2e-24 114.4 97 52.6
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 8.1e-24 114.0 96 57.3
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 8.1e-24 114.0 106 56.6
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 8.1e-24 114.0 106 58.5
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 1.1e-23 113.6 98 59.2
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.4e-23 113.2 96 57.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.4e-23 113.2 97 58.8
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.4e-23 113.2 97 58.8
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 2.4e-23 112.5 97 56.7
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 5.3e-23 111.3 103 62.1
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 5.3e-23 111.3 96 58.3
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 5.3e-23 111.3 96 56.2
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 9.0e-23 110.5 99 59.6
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 9.0e-23 110.5 100 57.0
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.2e-22 110.2 99 58.6
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.2e-22 110.2 96 54.2
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 2.0e-22 109.4 98 56.1
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 2.6e-22 109.0 96 58.3
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 3.4e-22 108.6 98 59.2
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-22 108.6 69 73.9
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 4.4e-22 108.2 103 58.3
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 4.4e-22 108.2 93 61.3
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 5.8e-22 107.8 101 56.4
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 5.8e-22 107.8 100 54.0
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 7.6e-22 107.5 91 57.1
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 9.9e-22 107.1 100 54.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 1.3e-21 106.7 102 53.9
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.2e-21 105.9 102 53.9
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.2e-21 105.9 98 54.1
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 2.2e-21 105.9 102 52.9
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 2.9e-21 105.5 88 59.1
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.9e-21 105.5 64 76.6
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 3.8e-21 105.1 115 55.7
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 6.4e-21 104.4 64 75.0
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 1.4e-20 103.2 100 54.0
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.4e-20 103.2 99 55.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 5.4e-20 101.3 103 52.4
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.7e-19 99.0 94 55.3
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 4.6e-19 98.2 61 80.3
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 7.9e-19 97.4 96 53.1
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.0e-18 97.1 101 55.4
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.7e-18 96.3 58 77.6
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 2.3e-18 95.9 96 49.0
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 6.2e-16 87.8 96 53.1
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.1e-15 87.0 65 58.5
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.4e-14 82.0 61 60.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 9.9e-14 80.5 52 73.1
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 1.7e-13 79.7 55 69.1
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 6.4e-13 77.8 61 60.7
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 5.4e-12 74.7 54 63.0
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 4.6e-11 71.6 50 68.0
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.8e-10 69.7 63 57.1
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.3e-10 69.3 63 55.6
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 9.6e-09 63.9 117 30.8
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 3.7e-08 62.0 29 82.8
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 1.8e-07 59.7 63 52.4


User provided reference genes

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