Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.1e-113 413.3 200 100.0
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 3.7e-82 308.5 197 73.6
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 4.8e-82 308.1 193 76.2
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 8.2e-82 307.4 203 74.9
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.4e-81 306.6 212 70.3
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.4e-81 306.6 193 74.6
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 3.4e-80 302.0 201 73.1
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.7e-79 299.7 204 70.1
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.2e-79 299.3 201 71.1
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 6.5e-79 297.7 200 72.5
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 8.5e-79 297.4 199 70.9
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.1e-78 297.0 197 74.1
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.9e-78 296.2 199 70.4
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.5e-78 295.8 198 70.2
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 1.6e-77 293.1 191 72.8
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.1e-77 292.7 193 70.5
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 2.1e-77 292.7 193 71.5
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.7e-77 292.4 203 66.5
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.7e-77 292.4 198 69.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 2.7e-77 292.4 198 69.7
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 3.6e-77 292.0 193 70.5
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.6e-77 292.0 193 70.5
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 4.6e-77 291.6 202 70.3
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 4.6e-77 291.6 213 67.1
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 7.9e-77 290.8 197 68.5
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 7.9e-77 290.8 199 70.9
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.0e-76 290.4 191 71.2
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.3e-76 289.3 205 67.8
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 5.1e-76 288.1 204 71.1
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.8e-76 287.3 190 70.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.1e-75 287.0 198 72.2
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.6e-75 285.8 199 71.4
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 3.3e-75 285.4 237 60.3
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 4.4e-75 285.0 204 69.6
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.2e-74 282.7 200 64.0
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 6.3e-74 281.2 199 67.3
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 2.4e-73 279.3 204 66.7
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 4.1e-73 278.5 199 68.3
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 5.3e-73 278.1 193 69.4
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 2.0e-72 276.2 198 67.2
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 2.0e-72 276.2 198 67.2
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 2.0e-72 276.2 198 67.2
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 4.5e-72 275.0 216 66.2
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 5.9e-72 274.6 197 66.5
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.2e-71 272.7 198 66.7
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 2.9e-71 272.3 198 66.7
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.9e-71 272.3 201 66.7
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 3.8e-71 271.9 198 65.7
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 5.0e-71 271.6 197 67.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 8.5e-71 270.8 200 65.5
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.1e-70 270.4 184 65.8
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.1e-70 270.4 197 66.0
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 4.2e-70 268.5 193 68.4
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.2e-69 266.9 187 67.9
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 7.9e-69 264.2 193 66.8
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.0e-68 263.8 199 64.8
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.8e-68 263.1 200 64.5
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.8e-68 263.1 200 64.5
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.8e-68 263.1 199 64.8
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 5.2e-68 261.5 198 65.2
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 5.2e-68 261.5 180 70.0
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 5.2e-68 261.5 222 60.8
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 8.8e-68 260.8 200 63.5
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.0e-67 259.6 197 62.9
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 2.6e-67 259.2 200 63.5
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.6e-67 259.2 193 64.8
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 4.4e-67 258.5 201 63.7
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 4.4e-67 258.5 202 62.9
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 5.7e-67 258.1 201 63.2
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 7.4e-67 257.7 201 66.2
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 7.4e-67 257.7 193 65.8
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 9.7e-67 257.3 205 62.9
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 2.8e-66 255.8 197 62.4
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.8e-66 255.8 199 66.3
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.8e-65 253.1 197 61.9
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 3.1e-65 252.3 199 64.8
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 4.1e-65 251.9 199 58.8
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 4.1e-65 251.9 200 62.5
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 2.0e-64 249.6 200 58.5
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 7.7e-64 247.7 194 66.0
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.9e-63 245.7 189 65.6
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 8.5e-63 244.2 193 62.2
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.8e-60 236.5 229 56.3
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 7.7e-56 221.1 135 70.4
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.9e-54 216.5 204 55.9
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.3e-52 209.5 142 66.2
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.7e-51 204.9 207 55.1
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 6.3e-50 201.4 168 61.3
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 2.7e-48 196.1 165 56.4
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.5e-46 190.3 170 53.5
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 4.0e-44 182.2 167 56.3
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 1.2e-43 180.6 164 55.5
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 5.7e-43 178.3 192 54.7
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 9.8e-43 177.6 166 52.4
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 3.5e-40 169.1 151 59.6
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.7e-37 158.7 135 58.5
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-34 150.6 131 55.7
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 2.3e-31 139.8 106 62.3
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 3.1e-28 129.4 115 53.0
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 2.9e-26 122.9 100 62.0
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 3.7e-26 122.5 165 37.6
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 5.6e-22 108.6 64 73.4
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 7.3e-22 108.2 89 65.2
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 9.5e-22 107.8 185 37.8
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.2e-21 105.1 80 66.2
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 6.8e-20 101.7 175 33.7
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.9e-18 96.3 56 76.8
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.2e-11 74.3 51 60.8
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 7.6e-11 71.6 209 30.1
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 9.9e-11 71.2 89 49.4
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 6.4e-10 68.6 92 48.9
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 6.4e-10 68.6 59 62.7
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 3.2e-09 66.2 79 53.2
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 4.1e-09 65.9 45 68.9
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 6.0e-08 62.0 72 45.8
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.3e-07 60.8 36 69.4
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 1.7e-07 60.5 62 45.2
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 1.7e-07 60.5 62 45.2


User provided reference genes

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