Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 4.7e-225 784.3 412 100.0
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 5.1e-163 578.2 418 72.0
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 1.9e-162 576.2 413 70.9
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 1.8e-160 569.7 417 72.2
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 3.8e-158 562.0 420 71.7
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 1.8e-155 553.1 413 69.2
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 6.7e-155 551.2 413 70.2
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 1.5e-151 540.0 415 66.5
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 2.2e-150 536.2 419 66.8
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 2.5e-149 532.7 431 66.4
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 7.2e-149 531.2 416 65.9
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 9.4e-149 530.8 439 64.0
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 1.2e-148 530.4 417 65.5
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 1.2e-148 530.4 432 65.5
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 1.4e-147 526.9 437 63.4
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 3.9e-147 525.4 431 64.7
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 8.8e-147 524.2 428 65.7
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 4.4e-146 521.9 423 65.7
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 5.7e-146 521.5 442 63.6
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 2.2e-145 519.6 457 60.6
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 2.2e-145 519.6 431 64.3
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 2.8e-145 519.2 491 56.4
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 2.4e-144 516.2 409 66.5
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 3.1e-144 515.8 414 65.7
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 4.1e-144 515.4 418 63.6
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 2.0e-143 513.1 417 64.7
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 4.5e-143 511.9 414 64.3
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 1.3e-142 510.4 413 64.4
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 1.1e-141 507.3 416 63.2
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 2.5e-141 506.1 426 62.0
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 1.4e-139 500.4 411 64.7
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 1.4e-139 500.4 415 63.1
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 1.4e-139 500.4 415 63.1
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 4.0e-139 498.8 412 63.3
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 5.2e-139 498.4 419 63.2
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 8.8e-139 497.7 415 62.7
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 8.8e-139 497.7 473 58.1
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 2.0e-138 496.5 409 62.3
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 7.5e-138 494.6 411 63.3
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 2.8e-137 492.7 427 60.2
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 4.8e-137 491.9 425 62.4
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 7.7e-135 484.6 492 57.3
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 3.8e-134 482.3 479 56.8
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 3.2e-133 479.2 438 60.0
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 4.7e-132 475.3 427 61.1
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 2.3e-131 473.0 438 59.6
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 2.8e-129 466.1 477 54.3
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 2.8e-129 466.1 448 55.8
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 3.7e-129 465.7 444 58.1
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 4.8e-129 465.3 477 54.3
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 6.3e-129 464.9 462 54.1
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 8.3e-129 464.5 453 57.6
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 2.7e-127 459.5 451 57.4
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 3.5e-127 459.1 433 56.8
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 1.0e-126 457.6 420 63.1
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.0e-126 457.6 421 58.9
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 1.7e-126 456.8 455 56.3
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 3.8e-126 455.7 421 58.9
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 1.1e-125 454.1 451 56.3
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 1.9e-125 453.4 451 56.8
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 4.2e-125 452.2 424 58.5
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 1.2e-124 450.7 424 58.7
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 2.1e-124 449.9 419 59.2
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 6.1e-124 448.4 275 74.2
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 1.0e-123 447.6 424 57.3
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 8.8e-123 444.5 428 57.0
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 1.5e-122 443.7 424 58.0
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 1.5e-122 443.7 273 74.7
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 2.6e-122 443.0 495 50.7
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 9.8e-122 441.0 310 69.4
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 2.8e-121 439.5 419 57.5
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 2.8e-121 439.5 418 55.7
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 1.4e-120 437.2 420 57.6
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 7.0e-120 434.9 525 49.1
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 7.0e-120 434.9 419 56.1
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 1.6e-119 433.7 464 52.2
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 2.0e-119 433.3 440 55.5
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 4.5e-119 432.2 417 55.6
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 4.5e-119 432.2 456 52.6
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 5.9e-119 431.8 417 55.4
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 1.3e-118 430.6 411 56.2
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 1.9e-117 426.8 532 48.9
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 3.6e-116 422.5 409 56.0
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 4.7e-116 422.2 279 66.7
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 1.0e-115 421.0 286 70.3
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 4.0e-115 419.1 424 55.4
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 2.6e-114 416.4 430 53.7
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 6.4e-113 411.8 427 54.3
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 8.3e-113 411.4 322 60.9
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 8.3e-113 411.4 268 73.9
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 4.6e-111 405.6 528 46.0
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 2.3e-110 403.3 415 48.7
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 6.6e-110 401.7 313 60.7
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 2.5e-109 399.8 415 50.4
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 1.5e-106 390.6 286 63.3
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 2.0e-106 390.2 270 69.6
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 1.3e-105 387.5 270 65.6
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 2.4e-104 383.3 290 65.2
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 1.1e-101 374.4 267 63.7
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 1.9e-101 373.6 290 62.8
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 2.5e-101 373.2 508 43.9
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 4.0e-99 365.9 347 51.3
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 6.8e-99 365.2 315 60.3
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 7.5e-98 361.7 313 56.5
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 7.8e-95 351.7 525 42.1
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 1.3e-94 350.9 231 70.6
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 8.1e-92 341.7 250 64.0
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 2.6e-90 336.7 267 60.7
ClCG03G004640 Citrullus lanatus HOM05D004937 ORTHO05D006414 2.9e-89 333.2 195 77.9
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 9.2e-88 328.2 294 55.8
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 4.3e-85 319.3 291 55.7
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 3.4e-82 309.7 285 55.4
CSS0005056 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 7.3e-77 292.0 177 76.8
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.3e-76 291.2 282 53.5
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.4e-75 287.7 274 54.7
Zm00001eb048580 Zea mays HOM05D004937 ORTHO05D006414 6.0e-71 272.3 188 66.0
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.9e-61 240.7 273 50.2
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.6e-60 237.7 229 52.8
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 8.1e-60 235.3 270 47.0
QL05p072848 Quercus lobata HOM05D004937 ORTHO05D006414 8.4e-57 225.3 136 75.0
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.5e-56 223.8 273 47.3
BcaB08g37427 Brassica carinata HOM05D004937 ORTHO05D006414 2.1e-52 210.7 178 58.4
Dinv13904 Davidia involucrata HOM05D004937 ORTHO05D006414 3.7e-52 209.9 208 60.6
ClCG03G004650 Citrullus lanatus HOM05D000020 ORTHO05D000904 1.8e-51 207.6 226 56.2
Mapoly0074s0008 Marchantia polymorpha HOM05D004937 ORTHO05D006414 5.0e-49 199.5 253 43.9
BcaB08g37425 Brassica carinata HOM05D004937 ORTHO05D006414 2.1e-47 194.1 137 65.7
Psat6g178560 Pisum sativum HOM05D004937 ORTHO05D006414 6.1e-47 192.6 137 65.7
Dinv13905 Davidia involucrata HOM05D004937 ORTHO05D006414 1.3e-46 191.4 101 84.2
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 2.2e-44 184.1 286 38.1
PRCOL_00004553 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 1.2e-39 168.3 321 35.2
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 2.6e-37 160.6 294 35.0
Aqoxy3G02634 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 7.7e-34 149.1 161 49.1
BcaB08g37428 Brassica carinata HOM05D004937 ORTHO05D006414 3.2e-32 143.7 217 44.2
Cre06.g305250 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 1.0e-30 138.7 311 32.5
Lj2C267G4 Lonicera japonica HOM05D004937 ORTHO05D006414 8.8e-30 135.6 98 63.3
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis HOM05D004937 ORTHO05D006414 1.2e-26 125.2 122 51.6
PGSC0003DMG400026496 Solanum tuberosum HOM05D004937 ORTHO05D006414 1.2e-26 125.2 78 75.6
PRCOL_00006577 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 1.3e-25 121.7 326 28.8
SGA_v2.0_scaffold4G01909 Striga asiatica HOM05D004937 ORTHO05D006414 2.9e-17 94.0 252 36.9
Dinv30719 Davidia involucrata HOM05D004937 ORTHO05D006414 8.0e-15 85.9 89 49.4
Os10g0401100 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 8.3e-12 75.9 49 63.3
PSO832G4260 Papaver somniferum HOM05D004937 ORTHO05D002819 8.3e-12 75.9 67 49.3
Atru.chr10.2244 Acer truncatum HOM05D004937 ORTHO05D006414 2.0e-10 71.2 142 46.5
Os07g0510800 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 2.0e-10 71.2 62 54.8
Os07g0510300 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 8.5e-09 65.9 104 36.5
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-07 61.6 37 70.3
FAN25G1168 Fragaria x ananassa HOM05D004937 ORTHO05D006414 1.0e-06 58.9 105 39.0


User provided reference genes

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