Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 9.6e-186 653.3 317 100.0
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 1.5e-157 559.7 317 86.1
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.2e-156 556.6 310 86.8
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.5e-154 549.7 310 86.5
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.5e-154 549.7 317 83.6
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 5.7e-154 547.7 314 83.4
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.3e-153 546.6 323 83.3
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 2.8e-153 545.4 315 83.8
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 3.7e-153 545.0 317 82.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 6.3e-153 544.3 314 82.2
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.0e-151 539.3 321 81.6
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 4.5e-151 538.1 312 85.9
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 5.9e-151 537.7 318 81.1
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.0e-150 537.0 317 82.3
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.9e-150 535.4 316 81.0
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 3.8e-150 535.0 327 81.0
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.1e-149 533.5 318 81.8
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.1e-149 533.5 316 81.6
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.5e-149 533.1 328 82.0
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.5e-149 533.1 318 80.5
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.5e-149 533.1 318 80.5
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.9e-149 532.7 314 81.2
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.9e-149 532.7 317 81.1
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 1.9e-149 532.7 318 80.5
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 4.2e-149 531.6 314 81.2
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 9.4e-149 530.4 323 81.4
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-148 530.0 318 80.2
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.6e-148 529.6 318 79.9
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.6e-148 529.6 314 80.9
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.0e-147 526.9 324 80.9
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.0e-147 526.9 323 81.4
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.4e-147 526.6 320 80.0
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.3e-147 525.8 323 80.8
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.0e-147 525.0 326 78.5
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.2e-146 523.5 325 80.9
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.5e-146 523.1 312 82.1
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 4.4e-146 521.5 320 80.0
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.4e-146 521.5 327 80.1
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 4.4e-146 521.5 338 79.3
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 7.5e-146 520.8 324 80.9
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 7.5e-146 520.8 324 80.9
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 9.8e-146 520.4 319 79.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.2e-145 519.2 333 78.4
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 2.8e-145 518.8 314 79.0
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.1e-144 516.9 319 79.3
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.1e-144 516.9 314 78.7
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.1e-144 516.9 314 78.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 1.1e-144 516.9 319 80.3
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 3.1e-144 515.4 319 79.0
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 2.7e-143 512.3 308 80.8
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 7.7e-143 510.8 326 77.3
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 1.0e-142 510.4 320 78.4
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.3e-142 510.0 291 83.2
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 2.2e-142 509.2 321 77.9
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 5.0e-142 508.1 321 77.6
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 8.5e-142 507.3 327 76.8
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.5e-141 505.8 322 77.6
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.5e-141 505.8 322 77.6
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-141 505.4 327 76.5
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 3.2e-141 505.4 327 76.5
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 4.7e-140 501.5 288 86.5
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.8e-139 499.6 316 75.0
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.5e-138 496.5 282 85.8
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 7.5e-138 494.2 284 85.2
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 1.7e-137 493.0 312 78.2
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 3.7e-137 491.9 311 77.8
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 9.2e-136 487.3 389 66.8
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 3.3e-133 478.8 426 62.9
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 3.6e-132 475.3 316 75.9
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 6.8e-131 471.1 318 75.8
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 8.9e-131 470.7 321 74.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.3e-129 466.8 322 75.5
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 3.7e-129 465.3 261 85.8
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 8.3e-129 464.2 309 74.1
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 4.6e-127 458.4 271 84.9
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 3.3e-125 452.2 302 72.2
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.2e-124 450.3 250 86.4
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.6e-124 449.9 263 82.9
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.5e-122 443.4 274 79.2
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 4.4e-122 441.8 284 77.1
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 2.9e-121 439.1 318 70.4
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 8.3e-121 437.6 285 78.9
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 7.8e-119 431.0 254 79.1
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 6.6e-118 427.9 308 67.5
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.1e-116 422.9 346 65.3
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 4.0e-115 418.7 261 79.7
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.8e-115 417.9 295 73.2
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.6e-114 416.0 308 65.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 5.8e-114 414.8 320 68.1
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.7e-113 413.3 313 67.4
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 3.2e-112 409.1 246 82.1
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.6e-106 389.4 314 65.3
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 6.0e-103 378.3 311 59.5
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 4.3e-101 372.1 264 67.8
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 5.6e-101 371.7 289 62.3
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.8e-99 366.7 643 38.3
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 5.2e-99 365.2 283 68.9
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.6e-95 352.1 313 62.3
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 5.1e-94 348.6 208 83.2
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 6.4e-89 331.6 309 57.6
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 9.6e-85 317.8 240 71.7
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.9e-80 303.5 321 54.2
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 9.6e-77 291.2 188 70.2
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-74 283.9 191 74.3
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 1.5e-74 283.9 216 63.0
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 9.6e-69 264.6 163 81.0
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 5.9e-66 255.4 191 70.2
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 7.6e-66 255.0 320 49.7
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 3.6e-63 246.1 155 73.5
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 4.6e-63 245.7 161 72.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 2.8e-60 236.5 240 54.2
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 4.8e-52 209.1 145 71.0
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-51 207.6 173 58.4
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.7e-47 192.6 156 66.0
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 7.7e-42 175.3 100 81.0
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 4.7e-39 166.0 90 88.9
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 9.1e-35 151.8 92 77.2
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.6e-31 139.8 271 34.3
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.0e-30 138.3 270 31.1
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.0e-26 124.0 80 77.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 2.2e-20 104.0 362 26.5
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.0e-14 83.6 59 66.1
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.2e-13 81.6 155 36.1
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-11 74.7 54 74.1
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 1.8e-11 74.3 48 68.8
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 5.6e-08 62.8 55 56.4
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 6.8e-06 55.8 30 76.7


User provided reference genes

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