Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.8e-184 649.0 320 100.0
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.9e-152 542.7 376 73.7
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 2.4e-152 542.3 375 72.5
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 1.2e-151 540.0 376 74.5
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.2e-151 540.0 376 73.4
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.0e-150 535.4 376 72.3
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 3.0e-150 535.4 378 74.1
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 1.5e-149 533.1 378 72.2
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.5e-149 533.1 377 72.1
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.8e-147 524.2 379 71.8
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 6.8e-147 524.2 378 71.4
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.2e-146 523.5 378 72.5
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.5e-146 520.8 379 71.2
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 7.5e-146 520.8 376 71.3
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 2.2e-145 519.2 377 71.6
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 8.3e-145 517.3 376 70.2
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.1e-144 516.9 339 76.4
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.4e-144 516.5 377 71.1
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 2.4e-144 515.8 380 71.1
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.4e-144 515.8 378 70.9
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 4.1e-144 515.0 376 70.2
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 5.4e-144 514.6 376 69.9
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 7.1e-144 514.2 376 71.3
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 3.5e-143 511.9 376 69.7
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.0e-142 510.4 376 71.0
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.7e-142 509.6 378 69.0
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.1e-141 506.9 378 68.8
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.5e-141 506.5 378 69.3
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 4.3e-141 505.0 375 68.5
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 7.3e-141 504.2 378 69.3
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.6e-140 503.1 376 69.1
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.1e-140 502.7 387 69.5
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.8e-140 502.3 376 68.6
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 2.8e-140 502.3 377 69.8
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 4.7e-140 501.5 374 69.0
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.1e-140 500.7 376 68.6
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 3.1e-139 498.8 377 69.0
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 5.2e-139 498.0 374 68.2
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 1.2e-138 496.9 377 68.7
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 2.6e-138 495.7 376 67.8
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 4.4e-138 495.0 375 68.3
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 5.8e-138 494.6 377 69.5
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 5.8e-138 494.6 377 68.2
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 1.7e-137 493.0 376 69.7
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 6.4e-137 491.1 376 67.6
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 6.4e-137 491.1 376 67.6
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 8.4e-137 490.7 376 66.2
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 8.4e-137 490.7 377 67.9
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.9e-136 489.6 374 67.6
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.1e-136 488.4 372 68.0
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 5.4e-136 488.0 377 66.8
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 5.4e-136 488.0 377 66.8
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 5.4e-136 488.0 374 67.1
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 7.1e-136 487.6 378 67.5
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.2e-135 486.9 378 66.4
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 2.1e-135 486.1 375 67.2
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.1e-135 486.1 378 68.0
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 2.1e-135 486.1 374 66.6
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.5e-135 485.3 361 69.0
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 7.8e-135 484.2 381 67.7
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.7e-134 483.0 375 66.9
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 1.7e-134 483.0 377 67.1
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 2.3e-134 482.6 375 68.0
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.3e-134 482.6 377 66.8
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 3.0e-134 482.3 374 66.8
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.9e-134 481.9 376 66.0
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 3.9e-134 481.9 377 66.8
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 8.6e-134 480.7 377 66.6
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.9e-133 479.6 376 66.2
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 3.3e-133 478.8 378 66.9
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 3.3e-133 478.8 376 65.4
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.3e-133 477.6 377 66.6
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 9.6e-133 477.2 375 66.4
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 9.6e-133 477.2 373 67.0
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.2e-132 476.9 374 65.5
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.2e-132 476.9 374 66.8
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.2e-132 476.9 374 66.8
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.2e-132 476.9 379 66.8
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 2.1e-132 476.1 375 66.9
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.8e-132 475.7 376 64.9
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 4.7e-132 474.9 375 65.1
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 6.2e-132 474.6 373 66.5
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 6.2e-132 474.6 376 66.5
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 6.2e-132 474.6 374 65.2
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 8.1e-132 474.2 378 64.8
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 8.1e-132 474.2 372 66.7
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.4e-131 473.4 377 65.5
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 2.4e-131 472.6 372 66.9
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.9e-131 471.1 394 64.0
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.5e-130 469.9 375 65.6
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 2.0e-130 469.5 376 67.0
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.0e-130 469.5 376 65.2
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 4.4e-130 468.4 371 65.2
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 5.8e-130 468.0 373 65.1
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.8e-130 468.0 374 64.4
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.6e-130 467.6 347 70.0
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 9.9e-130 467.2 373 65.4
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 9.9e-130 467.2 375 65.1
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.3e-129 466.8 377 63.4
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.3e-129 466.8 377 65.3
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.7e-129 466.5 376 65.7
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 8.4e-129 464.2 377 62.6
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.4e-128 463.4 375 63.7
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 3.2e-128 462.2 374 65.0
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 3.2e-128 462.2 373 63.8
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 4.2e-128 461.8 374 64.7
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 4.2e-128 461.8 374 64.7
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 4.2e-128 461.8 374 64.7
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 4.2e-128 461.8 374 64.7
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 4.2e-128 461.8 374 64.7
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 7.1e-128 461.1 375 65.6
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 7.1e-128 461.1 374 64.7
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 9.3e-128 460.7 376 63.6
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.2e-127 460.3 378 64.0
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 1.6e-127 459.9 373 64.1
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 2.1e-127 459.5 375 64.3
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 3.5e-127 458.8 373 64.3
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.5e-127 458.8 375 65.6
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 6.0e-127 458.0 357 65.0
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 1.0e-126 457.2 375 63.7
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 1.3e-126 456.8 376 64.1
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 2.3e-126 456.1 373 63.8
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.0e-126 455.7 373 62.5
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 3.0e-126 455.7 373 63.5
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 3.9e-126 455.3 373 63.5
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 6.6e-126 454.5 373 63.5
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 6.6e-126 454.5 373 63.8
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 6.6e-126 454.5 373 63.8
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 1.1e-125 453.8 373 63.8
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 2.1e-124 449.5 370 64.1
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 3.6e-124 448.7 373 64.1
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 4.8e-124 448.4 370 63.8
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.2e-122 443.7 426 56.1
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.1e-119 433.0 355 63.1
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 2.8e-116 422.5 306 70.3
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 2.8e-116 422.5 323 67.2
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 5.8e-114 414.8 346 61.6
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 9.3e-112 407.5 243 81.5
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.5e-104 382.9 367 58.0
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 9.3e-104 380.9 360 56.9
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.7e-103 379.4 314 62.4
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.4e-99 366.3 371 53.1
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 1.3e-97 360.5 346 56.9
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 5.2e-70 268.9 337 43.9
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.7e-69 265.4 160 81.2
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 4.0e-62 242.7 160 75.6
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 7.5e-61 238.4 209 59.3
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-54 218.0 197 57.9
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 3.6e-47 193.0 318 35.2
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 9.8e-45 184.9 162 60.5
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 1.3e-44 184.5 167 53.9
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 3.7e-44 183.0 180 53.9
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.0e-41 174.9 104 83.7
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 8.9e-38 161.8 158 53.8
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.5e-37 161.0 160 48.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.8e-37 159.1 155 54.8
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.8e-37 159.1 155 54.8
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.7e-36 157.5 97 83.5
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.2e-34 151.4 110 64.5
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 8.9e-30 135.2 92 72.8
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 5.6e-24 115.9 115 45.2
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.2e-23 114.8 105 61.0
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 7.6e-21 105.5 92 60.9
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 1.0e-17 95.1 92 55.4
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 8.7e-17 92.0 185 36.2
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 5.2e-14 82.8 171 34.5
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.0e-14 82.0 42 88.1
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 2.6e-13 80.5 48 83.3
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 9.9e-13 78.6 82 54.9
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.6e-10 69.7 35 91.4
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 2.5e-08 63.9 30 90.0
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 6.2e-07 59.3 30 80.0


User provided reference genes

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