Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 5.5e-31 137.1 75 100.0
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-14 82.0 66 63.6
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-14 82.0 66 63.6
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 1.5e-12 75.9 67 67.2
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.6e-09 65.9 61 59.0
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 2.0e-09 65.5 72 51.4
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 3.5e-09 64.7 57 59.6
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 3.5e-09 64.7 62 53.2
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 3.5e-09 64.7 62 53.2
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 4.5e-09 64.3 69 55.1
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 5.9e-09 63.9 56 58.9
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 5.9e-09 63.9 68 52.9
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 7.7e-09 63.5 59 54.2
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 1.0e-08 63.2 63 50.8
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.3e-08 62.8 68 51.5
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.3e-08 62.8 68 51.5
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.3e-08 62.8 69 53.6
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 1.3e-08 62.8 64 51.6
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.7e-08 62.4 60 56.7
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 2.9e-08 61.6 64 60.9
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.9e-08 61.6 53 64.2
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.8e-08 61.2 59 55.9
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 5.0e-08 60.8 62 54.8
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 5.0e-08 60.8 63 52.4
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 6.5e-08 60.5 61 54.1
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 6.5e-08 60.5 64 54.7
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 8.5e-08 60.1 57 56.1
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 8.5e-08 60.1 61 52.5
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.1e-07 59.7 63 50.8
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-07 59.3 65 53.8
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.9e-07 58.9 55 58.2
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.9e-07 58.9 52 61.5
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 2.5e-07 58.5 66 48.5
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 3.2e-07 58.2 62 46.8
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 3.2e-07 58.2 61 52.5
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 5.5e-07 57.4 57 54.4
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 5.5e-07 57.4 58 51.7
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.2e-07 57.0 55 52.7
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 7.2e-07 57.0 64 50.0
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 9.4e-07 56.6 64 50.0
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 9.4e-07 56.6 52 57.7
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 9.4e-07 56.6 59 52.5
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 9.4e-07 56.6 53 56.6
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 9.4e-07 56.6 53 56.6
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 9.4e-07 56.6 74 48.6
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.2e-06 56.2 67 49.3
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 1.2e-06 56.2 74 48.6
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.2e-06 56.2 55 52.7
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.6e-06 55.8 57 50.9
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.6e-06 55.8 46 67.4
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.1e-06 55.5 47 61.7
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 2.1e-06 55.5 67 49.3
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 2.1e-06 55.5 46 67.4
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 2.1e-06 55.5 46 65.2
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 2.1e-06 55.5 56 51.8
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 2.1e-06 55.5 58 51.7
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 2.7e-06 55.1 61 50.8
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 2.7e-06 55.1 54 55.6
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 2.7e-06 55.1 58 53.4
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 2.7e-06 55.1 58 53.4
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 2.7e-06 55.1 55 52.7
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 4.7e-06 54.3 67 47.8
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 4.7e-06 54.3 61 50.8
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 4.7e-06 54.3 55 50.9
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 6.1e-06 53.9 54 53.7
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 6.1e-06 53.9 53 54.7
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.1e-06 53.9 52 55.8
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 6.1e-06 53.9 52 55.8
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 8.0e-06 53.5 64 43.8
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 8.0e-06 53.5 60 48.3
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 8.0e-06 53.5 59 50.8
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 8.0e-06 53.5 45 62.2


User provided reference genes

Program Settings