Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0118 Trochodendron aralioides HOM05D009454 ORTHO05D009427 9.7e-68 260.0 130 100.0
TAR626G0489 Trochodendron aralioides HOM05D009454 ORTHO05D009427 2.6e-28 129.0 136 55.1
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 9.9e-28 127.1 134 52.2
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 5.1e-24 114.8 136 55.1
Nn1g06922 Nelumbo nucifera HOM05D009454 ORTHO05D009427 3.9e-16 88.6 128 44.5
MBI02_g26224_MAGBIO Magnolia biondii HOM05D009454 ORTHO05D009427 6.6e-16 87.8 131 42.0
Dinv18549 Davidia involucrata HOM05D014456 ORTHO05D011476 2.4e-13 79.3 132 44.7
ClCG10G006150 Citrullus lanatus HOM05D023599 ORTHO05D009427 1.2e-12 77.0 143 38.5
Duzib170G0628 Durio zibethinus HOM05D009454 ORTHO05D009427 2.6e-12 75.9 139 37.4
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 2.6e-12 75.9 131 36.6
Duzib213G0681 Durio zibethinus HOM05D009454 ORTHO05D009427 3.4e-12 75.5 139 38.8
Nn1g03746 Nelumbo nucifera HOM05D009454 ORTHO05D009427 4.4e-12 75.1 107 45.8
Gohir.A01G072300 Gossypium hirsutum HOM05D009454 ORTHO05D009427 7.6e-12 74.3 134 36.6
Gohir.D01G059100 Gossypium hirsutum HOM05D009454 ORTHO05D009427 7.6e-12 74.3 134 35.8
Phvul.011G145600 Phaseolus vulgaris HOM05D012347 ORTHO05D009427 1.3e-11 73.6 132 38.6
Dinv03958 Davidia involucrata HOM05D009454 ORTHO05D009427 1.7e-11 73.2 137 39.4
GSVIVG01030651001 Vitis vinifera HOM05D015989 ORTHO05D011476 1.7e-11 73.2 130 36.2
Gorai.002G080100 Gossypium raimondii HOM05D009454 ORTHO05D009427 2.9e-11 72.4 134 35.1
Sed0000886 Sechium edule HOM05D023599 ORTHO05D009427 6.4e-11 71.2 131 35.1
PSO541G4004 Papaver somniferum HOM05D023599 ORTHO05D009427 1.1e-10 70.5 161 31.7
CsaV3_3G005700 Cucumis sativus L. HOM05D023599 ORTHO05D009427 7.1e-10 67.8 145 36.6
Thecc.07G059700 Theobroma cacao HOM05D009454 ORTHO05D009427 7.1e-10 67.8 146 36.3
CiPaw.11G180600 Carya illinoinensis HOM05D009454 ORTHO05D009427 9.3e-10 67.4 140 36.4
MELO3C016602.2 Cucumis melo HOM05D023599 ORTHO05D009427 1.2e-09 67.0 144 36.1
Gohir.A04G023500 Gossypium hirsutum HOM05D009454 ORTHO05D009427 1.2e-09 67.0 137 37.2
Hund02152 Selenicereus undatus HOM05D017899 ORTHO05D009427 1.6e-09 66.6 139 33.8
Gohir.D05G363800 Gossypium hirsutum HOM05D009454 ORTHO05D009427 2.1e-09 66.2 144 36.8
Gorai.009G428800 Gossypium raimondii HOM05D009454 ORTHO05D009427 2.1e-09 66.2 137 38.7
Dinv10899 Davidia involucrata HOM05D012535 ORTHO05D011476 2.7e-09 65.9 134 37.3
Aqoxy4G01911 Aquilegia oxysepala HOM05D035254 ORTHO05D031288 4.6e-09 65.1 134 35.1
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 6.0e-09 64.7 134 35.8
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 1.3e-08 63.5 131 35.1
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 1.3e-08 63.5 136 38.2
Glyma.06G263300 Glycine max HOM05D012347 ORTHO05D009427 2.3e-08 62.8 140 36.4
Lalb_Chr19g0134651 Lupinus albus HOM05D012347 ORTHO05D009427 2.3e-08 62.8 140 34.3
Ca_18836_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 1.1e-07 60.5 145 34.5
Ca_30095_v3 Cicer arietinum L. HOM05D012347 ORTHO05D009427 1.1e-07 60.5 145 34.5
Migut.H01874 Erythranthe guttata HOM05D017288 ORTHO05D009427 1.1e-07 60.5 137 36.5
Haze_12967 Corylus avellana HOM05D029042 ORTHO05D015201 3.3e-07 58.9 142 33.8
Actinidia10697 Actinidia chinensis HOM05D009454 ORTHO05D009427 4.3e-07 58.5 132 33.3
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 4.3e-07 58.5 144 36.1
THA.LOC104809286 Tarenaya hassleriana HOM05D010083 ORTHO05D009427 7.3e-07 57.8 140 34.3
Sabra16G0281500 Salix brachista HOM05D020515 ORTHO05D009427 1.3e-06 57.0 140 30.7
Cfa014464 Carpinus fangiana HOM05D029042 ORTHO05D015201 1.6e-06 56.6 141 34.8
arahy.Tifrunner.gnm1.ann1.AXBA9A Arachis hypogaea HOM05D062896 ORTHO05D009427 2.1e-06 56.2 166 29.5
Potri.011G130400 Populus trichocarpa HOM05D020515 ORTHO05D009427 2.8e-06 55.8 140 37.1
PGR031G1751 Punica granatum HOM05D009454 ORTHO05D009427 3.6e-06 55.5 134 32.8
CSS0036879 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 4.8e-06 55.1 131 33.6
Aqoxy1G03831 Aquilegia oxysepala HOM05D009454 ORTHO05D009427 8.1e-06 54.3 136 32.4
EL10Ac4g08003 Beta vulgaris HOM05D017899 ORTHO05D009427 8.1e-06 54.3 139 30.9
MD03G1215100 Malus domestica HOM05D009454 ORTHO05D009427 8.1e-06 54.3 119 34.5
TWI36G0330 Tripterygium wilfordii HOM05D035254 ORTHO05D031288 8.1e-06 54.3 130 31.5


User provided reference genes

Program Settings