Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0115 Trochodendron aralioides HOM05D004277 ORTHO05D005148 3.3e-104 381.7 196 100.0
TAR626G1109 Trochodendron aralioides HOM05D004277 ORTHO05D005148 4.1e-70 268.5 178 80.3
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 3.1e-57 225.7 179 67.6
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 3.8e-55 218.8 191 63.9
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 2.7e-53 212.6 179 64.2
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 6.0e-53 211.5 192 61.5
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 6.0e-53 211.5 192 60.9
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 1.0e-52 210.7 178 65.7
Cpa.g.sc34.11 Carica papaya HOM05D004277 ORTHO05D005148 1.0e-52 210.7 191 60.7
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.3e-52 210.3 191 61.3
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.3e-52 210.3 191 61.3
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 1.7e-52 209.9 193 60.1
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 3.9e-52 208.8 191 60.7
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 3.9e-52 208.8 177 65.5
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 3.9e-52 208.8 191 60.7
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 5.1e-52 208.4 180 63.9
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 1.9e-51 206.5 179 64.2
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 9.6e-51 204.1 192 58.3
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.2e-50 203.8 191 60.2
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 2.1e-50 203.0 192 59.9
Haze_07823 Corylus avellana HOM05D004277 ORTHO05D005148 6.2e-50 201.4 192 58.9
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 1.1e-49 200.7 190 59.5
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 1.8e-49 199.9 192 57.3
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 1.8e-49 199.9 190 59.5
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 5.3e-49 198.4 192 58.9
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 1.5e-48 196.8 192 56.2
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 4.4e-48 195.3 191 58.1
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 4.4e-48 195.3 191 58.1
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 5.8e-48 194.9 192 56.8
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 5.8e-48 194.9 179 59.2
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 1.7e-47 193.4 192 57.8
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 8.4e-47 191.0 193 54.9
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 8.4e-47 191.0 191 57.6
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 8.4e-47 191.0 191 55.0
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.1e-46 190.7 194 56.2
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.1e-46 190.7 194 56.2
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 1.1e-46 190.7 176 58.5
Thecc.07G167700 Theobroma cacao HOM05D004277 ORTHO05D005148 1.1e-46 190.7 191 58.1
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 1.4e-46 190.3 194 58.2
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 1.4e-46 190.3 180 56.7
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 1.9e-46 189.9 191 58.1
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 4.2e-46 188.7 193 53.9
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 4.2e-46 188.7 191 57.6
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 5.4e-46 188.3 194 54.6
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 7.1e-46 188.0 193 54.4
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.2e-45 187.2 191 57.1
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 2.7e-45 186.0 193 53.9
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 3.5e-45 185.7 179 57.0
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 7.8e-45 184.5 191 56.5
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 7.8e-45 184.5 186 56.5
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 1.0e-44 184.1 179 54.7
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 3.9e-44 182.2 186 55.9
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 3.9e-44 182.2 180 56.7
Sopen12g008110 Solanum pennellii HOM05D004277 ORTHO05D005148 3.9e-44 182.2 180 56.7
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 5.1e-44 181.8 191 56.0
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 6.6e-44 181.4 189 55.6
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 1.5e-43 180.3 176 55.1
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 3.3e-43 179.1 180 54.4
Nitab4.5_0000388g0130 Nicotiana tabacum HOM05D004277 ORTHO05D005148 3.3e-43 179.1 180 56.7
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 4.3e-43 178.7 180 55.6
MD05G1224300 Malus domestica HOM05D004277 ORTHO05D005148 4.3e-43 178.7 139 66.9
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 1.3e-42 177.2 180 53.3
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 4.8e-42 175.3 181 55.8
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 4.8e-42 175.3 178 53.9
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 4.8e-42 175.3 187 54.5
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 1.4e-41 173.7 190 52.1
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 1.4e-41 173.7 178 56.2
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 6.9e-41 171.4 183 53.0
CARHR072840 Cardamine hirsuta HOM05D004277 ORTHO05D005148 6.9e-41 171.4 186 54.3
Sp5g34240 Schrenkiella parvula HOM05D004277 ORTHO05D005148 1.2e-40 170.6 186 54.3
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 1.2e-40 170.6 192 52.1
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 2.0e-40 169.9 183 52.5
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 2.6e-40 169.5 184 53.8
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 2.6e-40 169.5 190 53.2
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 4.5e-40 168.7 183 53.0
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 5.8e-40 168.3 184 53.3
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 5.8e-40 168.3 183 52.5
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 5.8e-40 168.3 183 52.5
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 7.6e-40 167.9 180 49.4
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 2.2e-39 166.4 183 53.6
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 2.9e-39 166.0 190 52.6
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 4.9e-39 165.2 178 50.0
Carub.0002s2606 Capsella rubella HOM05D004277 ORTHO05D005148 4.9e-39 165.2 184 51.6
HPP92_021082 Vanilla planifolia HOM05D004277 ORTHO05D005148 6.4e-39 164.9 176 53.4
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 1.4e-38 163.7 183 50.8
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 4.2e-38 162.2 182 53.3
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 3.5e-37 159.1 179 46.4
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 8.7e-36 154.5 195 48.7
TPR.G40005 Trifolium pratense HOM05D004277 ORTHO05D005148 9.6e-35 151.0 142 57.0
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 4.5e-32 142.1 178 47.8
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 2.9e-31 139.4 181 45.9
BcaB02g08672 Brassica carinata HOM05D004277 ORTHO05D005148 6.4e-31 138.3 158 51.3
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 3.9e-28 129.0 174 45.4
MD10G1205800 Malus domestica HOM05D004277 ORTHO05D005148 1.1e-27 127.5 122 60.7
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla HOM05D004277 ORTHO05D005148 8.2e-26 121.3 137 54.0
Zm00001eb060300 Zea mays HOM05D004277 ORTHO05D005148 5.8e-24 115.2 138 47.8
Nitab4.5_0009962g0020 Nicotiana tabacum HOM05D004277 ORTHO05D005148 3.5e-21 105.9 115 58.3
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 9.7e-19 97.8 97 55.7
SEGI_00999 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 4.2e-06 55.8 122 31.1
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 7.2e-06 55.1 145 28.3


User provided reference genes

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