Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0072 Trochodendron aralioides HOM05D002538 ORTHO05D003162 2.1e-186 656.0 439 100.0
TAR626G1005 Trochodendron aralioides HOM05D002538 ORTHO05D003162 1.2e-101 374.4 462 54.5
Dinv40607 Davidia involucrata HOM05D002538 ORTHO05D003162 1.0e-97 361.3 458 54.8
Dinv17362 Davidia involucrata HOM05D002538 ORTHO05D003162 3.2e-94 349.7 458 55.2
CSS0021581 Camellia sinensis var. sinensis HOM05D002538 ORTHO05D003162 6.6e-92 342.0 458 50.2
CSS0006869 Camellia sinensis var. sinensis HOM05D002538 ORTHO05D003162 1.5e-91 340.9 458 53.1
Rhsim02G0135500 Rhododendron simsii HOM05D002538 ORTHO05D003162 1.2e-90 337.8 458 58.5
vmacro03901 Vaccinium macrocarpon HOM05D002538 ORTHO05D003162 9.8e-88 328.2 458 55.2
Rhsim13G0180600 Rhododendron simsii HOM05D002538 ORTHO05D003162 8.3e-87 325.1 458 58.1
Aqoxy4G00604 Aquilegia oxysepala HOM05D002538 ORTHO05D003162 1.1e-86 324.7 458 54.1
vmacro15938 Vaccinium macrocarpon HOM05D002538 ORTHO05D003162 4.6e-85 319.3 458 47.6
Lj2C293T13 Lonicera japonica HOM05D002538 ORTHO05D003162 7.8e-85 318.5 458 53.1
Lj1C1200G23 Lonicera japonica HOM05D002538 ORTHO05D003162 5.1e-84 315.8 458 55.5
MD10G1288200 Malus domestica HOM05D002538 ORTHO05D003162 5.1e-84 315.8 480 53.8
CiPaw.09G064200 Carya illinoinensis HOM05D002538 ORTHO05D003162 1.1e-83 314.7 458 56.1
CANSAT35G0219 Cannabis sativa HOM05D002538 ORTHO05D003162 2.8e-82 310.1 458 53.1
Nn1g06401 Nelumbo nucifera HOM05D002538 ORTHO05D003162 2.8e-82 310.1 458 54.6
ECA236G0316 Erigeron canadensis HOM05D002538 ORTHO05D003162 6.2e-82 308.9 458 48.7
MD05G1309600 Malus domestica HOM05D002538 ORTHO05D003162 6.2e-82 308.9 458 54.8
Sed0021408 Sechium edule HOM05D002538 ORTHO05D003162 1.4e-81 307.8 458 53.1
Sabra11G0040600 Salix brachista HOM05D002538 ORTHO05D003162 5.2e-81 305.8 458 57.0
CsaV3_6G050460 Cucumis sativus L. HOM05D002538 ORTHO05D003162 2.6e-80 303.5 494 42.7
PSO832G0299 Papaver somniferum HOM05D002538 ORTHO05D003162 1.1e-78 298.1 462 50.6
Manes.16G032600 Manihot esculenta HOM05D002538 ORTHO05D003162 1.6e-77 294.3 458 53.3
Cc02_g14020 Coffea canephora HOM05D002538 ORTHO05D003162 2.7e-77 293.5 463 53.8
Atru.chr10.1782 Acer truncatum HOM05D002538 ORTHO05D003162 4.6e-77 292.7 458 52.4
THA.LOC104798407 Tarenaya hassleriana HOM05D002538 ORTHO05D003162 4.6e-77 292.7 458 50.4
CiPaw.10G053200 Carya illinoinensis HOM05D002538 ORTHO05D003162 6.0e-77 292.4 458 51.5
Duzib160G0687 Durio zibethinus HOM05D002538 ORTHO05D003162 6.0e-77 292.4 458 50.9
CDE02G1050 Ceratophyllum demersum HOM05D002538 ORTHO05D003162 1.3e-76 291.2 494 43.5
CDE09G0660 Ceratophyllum demersum HOM05D002538 ORTHO05D003162 1.3e-76 291.2 458 43.2
Lsat_1_v5_gn_7_30920 Lactuca sativa HOM05D002538 ORTHO05D003162 1.1e-75 288.1 458 50.9
Nn1g04247 Nelumbo nucifera HOM05D002538 ORTHO05D003162 2.5e-75 287.0 458 51.3
Prupe.4G053400 Prunus persica HOM05D002538 ORTHO05D003162 1.1e-73 281.6 486 52.1
Oeu012159.2 Olea europaea HOM05D002538 ORTHO05D003162 5.2e-73 279.3 460 49.1
PSO210G7643 Papaver somniferum HOM05D002538 ORTHO05D003162 2.0e-72 277.3 462 47.6
Migut.M01100 Erythranthe guttata HOM05D002538 ORTHO05D003162 2.6e-72 276.9 463 42.5
Peaxi162Scf00099g00079 Petunia axillaris HOM05D002538 ORTHO05D003162 2.6e-72 276.9 458 51.5
Sabra04G0031100 Salix brachista HOM05D002538 ORTHO05D003162 2.6e-72 276.9 458 47.6
Eucgr.D00590 Eucalyptus grandis HOM05D002538 ORTHO05D003162 2.9e-71 273.5 458 52.2
ClCG00G002770 Citrullus lanatus HOM05D002538 ORTHO05D003162 3.8e-71 273.1 458 48.5
ClCG01G023320 Citrullus lanatus HOM05D002538 ORTHO05D003162 3.8e-71 273.1 458 48.5
FvH4_3g08471 Fragaria vesca HOM05D002538 ORTHO05D003162 3.2e-70 270.0 458 45.9
TAR627G0221 Trochodendron aralioides HOM05D002538 ORTHO05D003162 4.2e-70 269.6 428 44.9
TAR627G0078 Trochodendron aralioides HOM05D002538 ORTHO05D003162 7.1e-70 268.9 428 44.9
FAN11G3059 Fragaria x ananassa HOM05D002538 ORTHO05D003162 9.3e-70 268.5 458 45.9
Potri.004G049400 Populus trichocarpa HOM05D002538 ORTHO05D003162 6.0e-69 265.8 458 51.7
Eucgr.C03068 Eucalyptus grandis HOM05D002538 ORTHO05D003162 7.8e-69 265.4 458 48.9
ECA234G1452 Erigeron canadensis HOM05D002538 ORTHO05D003162 1.0e-68 265.0 458 50.9
Lalb_Chr16g0384091 Lupinus albus HOM05D002538 ORTHO05D003162 3.9e-68 263.1 454 43.8
Sopen02g022500 Solanum pennellii HOM05D002538 ORTHO05D003162 8.7e-68 261.9 458 43.7
BcaC06g31502 Brassica carinata HOM05D002538 ORTHO05D003162 1.1e-67 261.5 458 41.5
BcaB07g30857 Brassica carinata HOM05D002538 ORTHO05D003162 1.9e-67 260.8 458 43.4
A09p22060 Brassica napus HOM05D002538 ORTHO05D003162 1.9e-67 260.8 458 41.5
BraA09t37812Z Brassica rapa HOM05D002538 ORTHO05D003162 1.9e-67 260.8 458 41.5
Ciclev10014139m.g Citrus clementina HOM05D002538 ORTHO05D003162 1.9e-67 260.8 329 53.2
FAN25G0596 Fragaria x ananassa HOM05D002538 ORTHO05D003162 3.3e-67 260.0 458 46.1
Solyc02g077600.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 3.3e-67 260.0 458 41.7
Potri.011G058500 Populus trichocarpa HOM05D002538 ORTHO05D003162 7.3e-67 258.8 458 52.8
BcaC04g21734 Brassica carinata HOM05D002538 ORTHO05D003162 1.3e-66 258.1 458 41.0
C09p28210 Brassica napus HOM05D002538 ORTHO05D003162 1.3e-66 258.1 458 41.0
Peaxi162Scf00490g00311 Petunia axillaris HOM05D002538 ORTHO05D003162 1.6e-66 257.7 458 42.6
RcHm_v2.0_Chr5g0009341 Rosa chinensis HOM05D002538 ORTHO05D003162 1.6e-66 257.7 458 46.5
CAN.G529.62 Capsicum annuum HOM05D002538 ORTHO05D003162 2.1e-66 257.3 458 51.3
Nitab4.5_0003315g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 2.1e-66 257.3 458 42.1
PSO541G2371 Papaver somniferum HOM05D002538 ORTHO05D003162 2.8e-66 256.9 462 51.9
PGR004G1187 Punica granatum HOM05D002538 ORTHO05D003162 4.8e-66 256.1 458 49.6
A06p46220 Brassica napus HOM05D002538 ORTHO05D003162 6.2e-66 255.8 494 39.5
BraA06t27486Z Brassica rapa HOM05D002538 ORTHO05D003162 6.2e-66 255.8 494 39.5
PSO675G8802 Papaver somniferum HOM05D002538 ORTHO05D003162 1.1e-65 255.0 462 46.1
C07p29240 Brassica napus HOM05D002538 ORTHO05D003162 1.4e-65 254.6 458 41.3
BolC7t43466H Brassica oleracea HOM05D002538 ORTHO05D003162 1.4e-65 254.6 458 41.3
Aa31LG9G6820 Aethionema arabicum HOM05D002538 ORTHO05D003162 1.8e-65 254.2 487 44.6
Sp2g10920 Schrenkiella parvula HOM05D002538 ORTHO05D003162 1.8e-65 254.2 458 41.3
BolC9t55694H Brassica oleracea HOM05D002538 ORTHO05D003162 2.4e-65 253.8 458 40.8
Lalb_Chr15g0089671 Lupinus albus HOM05D002538 ORTHO05D003162 3.1e-65 253.4 463 47.1
Hma1.2p1_0206F.1_g087630 Hydrangea macrophylla HOM05D002538 ORTHO05D003162 5.3e-65 252.7 454 50.9
HanXRQChr15g0480031 Helianthus annuus HOM05D002538 ORTHO05D003162 1.2e-64 251.5 458 45.2
Nitab4.5_0006826g0020 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.2e-64 251.5 458 41.3
Hund23821 Selenicereus undatus HOM05D002538 ORTHO05D003162 4.4e-64 249.6 458 44.5
Thhalv10000755m.g Eutrema salsugineum HOM05D002538 ORTHO05D003162 7.6e-64 248.8 454 40.7
QL05p042992 Quercus lobata HOM05D002538 ORTHO05D003162 2.9e-63 246.9 458 52.6
CARHR175860 Cardamine hirsuta HOM05D002538 ORTHO05D003162 3.8e-63 246.5 458 51.7
FAN21G0308 Fragaria x ananassa HOM05D002538 ORTHO05D003162 3.8e-63 246.5 458 43.9
Sc17g0005890 Simmondsia chinensis HOM05D002538 ORTHO05D003162 8.4e-63 245.4 458 45.2
GSVIVG01021121001 Vitis vinifera HOM05D002538 ORTHO05D003162 1.1e-62 245.0 250 76.4
MSTRG.7364 Avicennia marina HOM05D002538 ORTHO05D003162 1.9e-62 244.2 458 46.3
Ah.15g093000 Amaranthus hybridus HOM05D002538 ORTHO05D003162 7.1e-62 242.3 458 46.5
EL10Ac8g20445 Beta vulgaris HOM05D002538 ORTHO05D003162 3.5e-61 240.0 458 40.0
Manes.17G050000 Manihot esculenta HOM05D002538 ORTHO05D003162 7.9e-61 238.8 458 50.9
MELO3C007254.2 Cucumis melo HOM05D002538 ORTHO05D003162 1.0e-60 238.4 495 44.4
DCAR_028041 Daucus carota HOM05D002538 ORTHO05D003162 1.7e-60 237.7 458 50.0
unitig_27.g24978 Utricularia gibba HOM05D002538 ORTHO05D003162 2.5e-59 233.8 460 43.5
DCAR_024895 Daucus carota HOM05D002538 ORTHO05D003162 7.3e-59 232.3 458 49.8
Carub.0008s0186 Capsella rubella HOM05D002538 ORTHO05D003162 1.6e-58 231.1 458 46.5
Lsat_1_v5_gn_4_27980 Lactuca sativa HOM05D002538 ORTHO05D003162 2.1e-58 230.7 458 48.7
Lalb_Chr09g0327861 Lupinus albus HOM05D002538 ORTHO05D003162 2.8e-58 230.3 454 44.7
Haze_06366 Corylus avellana HOM05D002538 ORTHO05D003162 1.1e-57 228.4 463 47.7
EL10Ac7g17568 Beta vulgaris HOM05D002538 ORTHO05D003162 1.4e-57 228.0 458 47.4
Solyc10g008950.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 3.1e-57 226.9 486 47.1
Sopen10g004740 Solanum pennellii HOM05D002538 ORTHO05D003162 3.1e-57 226.9 486 47.1
Atru.chr10.1781 Acer truncatum HOM05D002538 ORTHO05D003162 6.9e-57 225.7 451 49.9
Glyma.07G202100 Glycine max HOM05D002538 ORTHO05D003162 6.9e-57 225.7 463 40.0
ATR0602G206 Amborella trichopoda HOM05D002538 ORTHO05D003162 9.0e-57 225.3 458 44.1
Ca_18600_v3 Cicer arietinum L. HOM05D002538 ORTHO05D003162 2.6e-56 223.8 400 52.5
Sed0000642 Sechium edule HOM05D002538 ORTHO05D003162 4.5e-56 223.0 458 45.9
Gohir.D10G028700 Gossypium hirsutum HOM05D002538 ORTHO05D003162 2.2e-55 220.7 458 46.5
SGA_v2.0_scaffold309G48172 Striga asiatica HOM05D002538 ORTHO05D003162 2.2e-55 220.7 401 45.1
Glyma.13G174200 Glycine max HOM05D002538 ORTHO05D003162 3.8e-55 219.9 463 39.7
arahy.Tifrunner.gnm1.ann1.BNQL10 Arachis hypogaea HOM05D002538 ORTHO05D003162 4.9e-55 219.5 454 40.5
arahy.Tifrunner.gnm1.ann1.T00U8Q Arachis hypogaea HOM05D002538 ORTHO05D003162 4.9e-55 219.5 454 40.5
AUR62014880 Chenopodium quinoa HOM05D002538 ORTHO05D003162 6.4e-55 219.2 460 48.3
Psat7g116720 Pisum sativum HOM05D002538 ORTHO05D003162 8.4e-55 218.8 454 48.5
Gohir.A10G028300 Gossypium hirsutum HOM05D002538 ORTHO05D003162 1.1e-54 218.4 458 47.2
MBI06_g04404_MAGBIO Magnolia biondii HOM05D002538 ORTHO05D003162 1.4e-54 218.0 461 42.3
Hund18210 Selenicereus undatus HOM05D002538 ORTHO05D003162 4.2e-54 216.5 429 38.0
AUR62031088 Chenopodium quinoa HOM05D002538 ORTHO05D003162 1.6e-53 214.5 460 44.1
Zm00001eb295820 Zea mays HOM05D002538 ORTHO05D003162 3.5e-53 213.4 458 36.9
Cfa000535 Carpinus fangiana HOM05D002538 ORTHO05D003162 4.6e-53 213.0 458 46.5
Phvul.003G290500 Phaseolus vulgaris HOM05D002538 ORTHO05D003162 7.9e-53 212.2 463 46.2
Zm00001eb343670 Zea mays HOM05D002538 ORTHO05D003162 6.7e-52 209.1 405 48.6
SalBow8G1315 Salvia bowleyana HOM05D002538 ORTHO05D003162 1.9e-51 207.6 460 42.4
SalBow8G4204 Salvia bowleyana HOM05D002538 ORTHO05D003162 1.9e-51 207.6 460 42.4
PGSC0003DMG400022833 Solanum tuberosum HOM05D002538 ORTHO05D003162 4.3e-51 206.5 486 46.5
Duzib235G1107 Durio zibethinus HOM05D002538 ORTHO05D003162 1.3e-50 204.9 458 43.7
Lj4g0011488 Lotus japonicus HOM05D002538 ORTHO05D003162 3.7e-50 203.4 454 42.5
VMungo0540G0056 Vigna mungo HOM05D002538 ORTHO05D003162 1.1e-49 201.8 454 41.6
HanXRQChr17g0564931 Helianthus annuus HOM05D002538 ORTHO05D003162 6.9e-49 199.1 458 42.8
CAN.G813.6 Capsicum annuum HOM05D002538 ORTHO05D003162 9.0e-49 198.7 487 40.0
COL.COLO4_31408 Corchorus olitorius HOM05D002538 ORTHO05D003162 9.0e-49 198.7 458 47.8
Glyma.13G234600 Glycine max HOM05D002538 ORTHO05D003162 1.2e-48 198.4 465 43.2
Potri.017G016800 Populus trichocarpa HOM05D002538 ORTHO05D003162 3.4e-48 196.8 455 41.8
Gorai.011G030500 Gossypium raimondii HOM05D002538 ORTHO05D003162 8.4e-47 192.2 458 45.0
Sabra17G0013000 Salix brachista HOM05D002538 ORTHO05D003162 1.9e-46 191.0 455 41.3
TWI14G0291 Tripterygium wilfordii HOM05D002538 ORTHO05D003162 5.5e-46 189.5 462 33.3
unitig_699.g19113 Utricularia gibba HOM05D002538 ORTHO05D003162 9.3e-46 188.7 414 36.2
Os05g0563050 Oryza sativa ssp. japonica HOM05D002538 ORTHO05D003162 1.2e-45 188.3 314 41.4
Actinidia39484 Actinidia chinensis HOM05D002538 ORTHO05D003162 1.8e-44 184.5 286 46.2
TWI38G0418 Tripterygium wilfordii HOM05D002538 ORTHO05D003162 2.3e-44 184.1 393 41.2
Os02g0307000 Oryza sativa ssp. japonica HOM05D002538 ORTHO05D003162 3.0e-44 183.7 463 32.6
VMungo1395G0001 Vigna mungo HOM05D002538 ORTHO05D003162 3.9e-44 183.3 296 46.3
Nitab4.5_0001955g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.9e-43 181.0 250 70.0
Hund21205 Selenicereus undatus HOM05D002538 ORTHO05D003162 5.3e-41 172.9 462 39.0
AL8G12440 Arabidopsis lyrata HOM05D002538 ORTHO05D003162 1.2e-40 171.8 458 44.1
Cpa.g.sc83.100 Carica papaya HOM05D002538 ORTHO05D003162 3.4e-40 170.2 463 31.7
AUR62025528 Chenopodium quinoa HOM05D002538 ORTHO05D003162 5.8e-40 169.5 458 40.4
Duzib192G0543 Durio zibethinus HOM05D002538 ORTHO05D003162 1.0e-39 168.7 458 44.8
AT5G46070 Arabidopsis thaliana HOM05D002538 ORTHO05D003162 2.2e-39 167.5 458 44.3
Thecc.06G180200 Theobroma cacao HOM05D002538 ORTHO05D003162 6.5e-39 166.0 458 44.3
Gohir.D06G135500 Gossypium hirsutum HOM05D002538 ORTHO05D003162 8.4e-39 165.6 458 41.7
Gorai.010G157500 Gossypium raimondii HOM05D002538 ORTHO05D003162 1.1e-38 165.2 458 41.5
Gohir.A06G127200 Gossypium hirsutum HOM05D002538 ORTHO05D003162 1.9e-38 164.5 458 40.2
TWI23G0843 Tripterygium wilfordii HOM05D002538 ORTHO05D003162 1.9e-38 164.5 513 31.8
Zm00001eb235320 Zea mays HOM05D002538 ORTHO05D003162 2.1e-37 161.0 463 38.4
SEGI_39920 Sequoiadendron giganteum HOM05D002538 ORTHO05D003162 2.3e-36 157.5 458 41.9
Nitab4.5_0007082g0020 Nicotiana tabacum HOM05D002538 ORTHO05D003162 3.9e-36 156.8 122 73.8
Nitab4.5_0002114g0140 Nicotiana tabacum HOM05D002538 ORTHO05D003162 8.7e-36 155.6 341 37.2
Phvul.006G181400 Phaseolus vulgaris HOM05D002538 ORTHO05D003162 1.5e-35 154.8 282 40.1
Medtr4g088220 Medicago truncatula HOM05D002538 ORTHO05D003162 4.3e-35 153.3 454 42.7
AUR62008705 Chenopodium quinoa HOM05D002538 ORTHO05D003162 6.3e-34 149.4 458 38.9
Oeu050786.1 Olea europaea HOM05D002538 ORTHO05D003162 5.3e-33 146.4 123 66.7
Sabra03G0113700 Salix brachista HOM05D002538 ORTHO05D003162 1.6e-29 134.8 197 52.3
AagrBONN_evm.TU.Sc2ySwM_117.2138 Anthoceros agrestis HOM05D002538 ORTHO05D003162 1.8e-28 131.3 456 26.3
Sabra11G0106900 Salix brachista HOM05D000190 ORTHO05D000113 3.3e-27 127.1 220 52.3
Pp3c12_11340 Physcomitrium patens HOM05D002538 ORTHO05D003162 4.3e-27 126.7 458 30.1
Sabra15G0033700 Salix brachista HOM05D002538 ORTHO05D005184 2.0e-24 117.9 98 66.3
Glyma.15G078400 Glycine max HOM05D002538 ORTHO05D003162 2.2e-23 114.4 274 37.6
Pp3c1_10700 Physcomitrium patens HOM05D002538 ORTHO05D003162 5.5e-22 109.8 274 38.7
Sabra15G0058100 Salix brachista HOM05D002538 ORTHO05D003162 7.9e-21 105.9 113 56.6
Pp3c2_33790 Physcomitrium patens HOM05D002538 ORTHO05D003162 1.0e-20 105.5 426 31.9
Pp3c3_11940 Physcomitrium patens HOM05D002538 ORTHO05D003162 3.9e-20 103.6 429 25.6
HPP92_020202 Vanilla planifolia HOM05D002538 ORTHO05D003162 2.6e-19 100.9 278 30.2
QL05p045140 Quercus lobata HOM05D002538 ORTHO05D003162 7.4e-19 99.4 108 60.2
QL05p045510 Quercus lobata HOM05D002538 ORTHO05D003162 7.4e-19 99.4 108 60.2
Actinidia16575 Actinidia chinensis HOM05D002538 ORTHO05D003162 2.2e-18 97.8 99 53.5
Mapoly0197s0017 Marchantia polymorpha HOM05D002538 ORTHO05D003162 3.8e-15 87.0 282 27.7
THA.LOC104801159 Tarenaya hassleriana HOM05D002538 ORTHO05D013978 8.0e-13 79.3 412 36.4
Sabra05G0012000 Salix brachista HOM05D000013 ORTHO05D010973 4.0e-12 77.0 162 51.2
SHI28097 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-12 75.9 210 32.4
SMO137G0049 Selaginella moellendorffii HOM05D002538 ORTHO05D003162 3.1e-09 67.4 201 30.3
Zm00001eb166970 Zea mays HOM05D002538 ORTHO05D003162 1.2e-08 65.5 84 39.3
Actinidia39481 Actinidia chinensis HOM05D002538 ORTHO05D003162 7.7e-08 62.8 276 31.9
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 1.3e-07 62.0 124 34.7
AT1G03830 Arabidopsis thaliana HOM05D002538 ORTHO05D013978 5.0e-07 60.1 440 24.8
GSVIVG01021122001 Vitis vinifera HOM05D002538 ORTHO05D003162 8.5e-07 59.3 38 71.1
MD05G1253900 Malus domestica HOM05D002538 ORTHO05D003162 3.2e-06 57.4 66 42.4
Carub.0001s0295 Capsella rubella HOM05D002538 ORTHO05D013978 7.2e-06 56.2 450 25.1


User provided reference genes

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