Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 2.5e-97 359.0 213 100.0
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.8e-40 169.5 216 51.9
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 3.1e-39 166.0 227 45.8
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 5.0e-37 158.7 213 49.3
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 5.7e-33 145.2 216 47.7
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 3.7e-32 142.5 206 44.7
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 6.3e-32 141.7 214 40.7
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.4e-31 139.8 193 49.7
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.9e-30 135.2 223 46.2
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 7.7e-30 134.8 212 49.1
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.0e-29 134.4 216 42.6
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 2.3e-29 133.3 214 42.1
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 2.5e-28 129.8 139 48.2
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 3.3e-28 129.4 216 40.3
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 4.3e-28 129.0 166 45.2
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 4.3e-28 129.0 228 49.1
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 2.1e-27 126.7 217 39.6
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 6.1e-27 125.2 215 43.7
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 8.0e-27 124.8 219 38.8
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 3.0e-26 122.9 175 43.4
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 7.5e-25 118.2 219 46.6
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.9e-24 116.3 171 42.7
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 4.9e-24 115.5 191 44.5
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 6.4e-24 115.2 215 41.4
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 8.3e-24 114.8 170 41.8
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.1e-23 114.4 171 42.1
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.8e-23 113.6 167 39.5
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 2.4e-23 113.2 192 42.7
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 4.1e-23 112.5 205 39.5
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 7.0e-23 111.7 190 44.2
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 9.2e-23 111.3 158 44.3
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 2.0e-22 110.2 157 42.7
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 2.0e-22 110.2 147 44.2
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 2.7e-22 109.8 203 35.5
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 2.7e-22 109.8 157 42.0
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 1.0e-21 107.8 205 37.1
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.3e-21 107.5 189 41.3
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 2.3e-21 106.7 169 41.4
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 3.0e-21 106.3 195 40.5
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 3.0e-21 106.3 192 39.6
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 3.0e-21 106.3 214 36.9
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 3.9e-21 105.9 144 44.4
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 5.0e-21 105.5 171 42.7
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 8.6e-21 104.8 169 39.1
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 8.6e-21 104.8 163 36.8
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 1.9e-20 103.6 170 40.0
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 1.9e-20 103.6 192 42.2
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 7.3e-20 101.7 188 39.4
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 9.5e-20 101.3 148 40.5
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 1.2e-19 100.9 177 39.5
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 1.6e-19 100.5 193 37.3
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 2.1e-19 100.1 162 38.3
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 2.1e-19 100.1 216 42.6
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.1e-19 100.1 152 39.5
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 2.8e-19 99.8 146 40.4
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 3.6e-19 99.4 193 39.4
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.6e-19 99.4 165 37.6
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 3.6e-19 99.4 165 37.6
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 6.2e-19 98.6 174 43.7
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.0e-19 98.2 202 36.6
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 8.0e-19 98.2 180 38.3
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 8.0e-19 98.2 177 41.8
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 1.4e-18 97.4 197 36.5
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.8e-18 97.1 152 39.5
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.3e-18 96.7 148 42.6
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.3e-18 96.7 151 46.4
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 3.1e-18 96.3 215 33.5
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 5.2e-18 95.5 151 37.7
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 5.2e-18 95.5 154 41.6
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 8.9e-18 94.7 170 36.5
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 8.9e-18 94.7 195 42.1
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.5e-17 94.0 157 38.2
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.6e-17 93.2 154 37.7
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 2.6e-17 93.2 152 48.7
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 4.4e-17 92.4 163 38.0
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 5.8e-17 92.0 180 38.9
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 5.8e-17 92.0 154 39.0
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 7.5e-17 91.7 174 37.9
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 8.3e-16 88.2 166 39.2
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 5.4e-15 85.5 168 40.5
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 4.6e-14 82.4 167 35.9
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 6.0e-14 82.0 201 35.3
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 7.8e-14 81.6 154 37.0
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 1.3e-13 80.9 184 34.2
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 1.3e-13 80.9 188 44.1
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 1.7e-13 80.5 168 35.1
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 1.7e-13 80.5 166 48.8
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 1.7e-13 80.5 161 36.6
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 2.3e-13 80.1 196 33.2
TAR381G1423 Trochodendron aralioides HOM05D005065 ORTHO05D005944 3.9e-13 79.3 50 72.0
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 5.0e-13 79.0 212 34.4
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 1.1e-12 77.8 169 34.9
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 2.5e-12 76.6 195 32.8
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 2.5e-12 76.6 195 32.8
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 2.5e-12 76.6 137 33.6
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 3.3e-12 76.3 173 34.7
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.3e-12 76.3 153 35.9
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.3e-12 76.3 187 34.8
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 4.3e-12 75.9 228 34.6
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 4.3e-12 75.9 156 34.0
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 4.3e-12 75.9 156 34.0
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 5.6e-12 75.5 178 36.5
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 5.6e-12 75.5 187 37.4
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 5.6e-12 75.5 201 32.3
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 7.3e-12 75.1 228 34.2
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 7.3e-12 75.1 177 34.5
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 7.3e-12 75.1 132 36.4
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 9.5e-12 74.7 209 32.5
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.6e-11 73.9 140 33.6
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 2.1e-11 73.6 176 36.4
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 2.8e-11 73.2 164 31.7
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 2.8e-11 73.2 158 32.3
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 2.8e-11 73.2 170 34.7
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 2.8e-11 73.2 171 33.3
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 4.7e-11 72.4 161 32.9
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 4.7e-11 72.4 161 32.9
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 4.7e-11 72.4 202 35.6
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 4.7e-11 72.4 161 32.9
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 6.2e-11 72.0 180 35.0
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 6.2e-11 72.0 163 34.4
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 6.2e-11 72.0 143 34.3
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 1.1e-10 71.2 149 34.9
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 1.1e-10 71.2 220 33.6
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 1.1e-10 71.2 174 32.2
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 1.4e-10 70.9 223 33.2
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 1.8e-10 70.5 192 35.9
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 2.3e-10 70.1 166 34.3
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.3e-10 70.1 130 36.2
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 4.0e-10 69.3 157 43.3
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 5.2e-10 68.9 194 34.0
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 8.9e-10 68.2 175 33.1
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 8.9e-10 68.2 154 37.0
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 1.2e-09 67.8 184 34.2
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.5e-09 67.4 137 33.6
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 2.0e-09 67.0 185 35.1
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 4.4e-09 65.9 137 32.8
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 8.3e-08 61.6 173 30.6
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 8.3e-08 61.6 107 33.6
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 4.1e-07 59.3 203 30.5
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 3.5e-06 56.2 161 26.1


User provided reference genes

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