Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0021 Trochodendron aralioides HOM05D003689 ORTHO05D003950 1.7e-64 250.4 289 100.0
Nn8g39148 Nelumbo nucifera HOM05D003689 ORTHO05D003950 6.0e-33 145.6 296 80.4
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 2.1e-25 120.6 291 67.4
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 3.5e-25 119.8 95 61.1
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 3.5e-25 119.8 95 61.1
Nn7g35992 Nelumbo nucifera HOM05D003689 ORTHO05D003950 3.0e-24 116.7 116 57.8
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 1.5e-23 114.4 94 60.6
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.6e-22 110.9 94 63.8
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 2.1e-22 110.5 95 58.9
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 2.8e-22 110.2 94 59.6
MBI04_g43860_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 3.6e-22 109.8 95 64.2
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 1.2e-20 104.8 95 53.7
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 1.5e-20 104.4 95 53.7
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 2.0e-20 104.0 95 55.8
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 2.6e-20 103.6 94 54.3
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 2.2e-19 100.5 296 57.4
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 8.3e-19 98.6 95 51.6
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 2.4e-18 97.1 95 51.6
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.2e-18 96.7 294 63.6
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 4.1e-18 96.3 95 51.6
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 4.1e-18 96.3 110 45.5
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 9.2e-18 95.1 103 50.5
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 9.2e-18 95.1 95 53.7
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 9.2e-18 95.1 95 53.7
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 1.2e-17 94.7 96 50.0
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 2.1e-17 94.0 93 50.5
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.7e-17 93.6 107 49.5
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 4.6e-17 92.8 94 52.1
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.3e-16 91.3 96 52.1
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 1.3e-16 91.3 95 48.4
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 3.9e-16 89.7 95 49.5
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.9e-16 89.7 95 49.5
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.9e-16 89.7 95 49.5
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 3.9e-16 89.7 101 46.5
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 5.1e-16 89.4 94 48.9
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 5.1e-16 89.4 94 48.9
Aqoxy7G03846 Aquilegia oxysepala HOM05D003689 ORTHO05D003950 6.6e-16 89.0 109 50.5
FAN23G2385 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.1e-15 88.2 289 64.0
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 1.5e-15 87.8 91 47.3
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 1.9e-15 87.4 101 45.5
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 3.3e-15 86.7 95 51.6
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 1.6e-14 84.3 94 46.8
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 1.4e-13 81.3 95 48.4
MD15G1097800 Malus domestica HOM05D003689 ORTHO05D003950 1.4e-13 81.3 97 47.4
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 1.8e-13 80.9 101 45.5
PGSC0003DMG400024327 Solanum tuberosum HOM05D003689 ORTHO05D003950 1.5e-12 77.8 39 84.6
CSS0016195 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 2.0e-12 77.4 39 87.2
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 2.0e-12 77.4 101 46.5
Eucgr.C02891 Eucalyptus grandis HOM05D003689 ORTHO05D003950 2.0e-12 77.4 95 42.1
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 2.0e-12 77.4 98 41.8
DCAR_004497 Daucus carota HOM05D003689 ORTHO05D003950 3.4e-12 76.6 97 47.4
ECA234G0433 Erigeron canadensis HOM05D003689 ORTHO05D003950 3.4e-12 76.6 38 86.8
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 4.4e-12 76.3 106 47.2
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 7.6e-12 75.5 98 38.8
Cpa.g.sc78.81 Carica papaya HOM05D003689 ORTHO05D003950 1.3e-11 74.7 299 60.2
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 1.3e-11 74.7 39 84.6
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 1.7e-11 74.3 107 37.4
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 2.2e-11 73.9 95 43.2
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 2.2e-11 73.9 95 43.2
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 2.2e-11 73.9 107 42.1
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.9e-11 73.6 87 46.0
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 2.9e-11 73.6 99 44.4
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 4.9e-11 72.8 99 46.5
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 6.4e-11 72.4 95 43.2
Rhsim01G0097100 Rhododendron simsii HOM05D003689 ORTHO05D003950 6.4e-11 72.4 39 79.5
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 8.4e-11 72.0 106 37.7
Lalb_Chr05g0222931 Lupinus albus HOM05D003689 ORTHO05D003950 1.1e-10 71.6 38 78.9
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 1.4e-10 71.2 106 37.7
MD15G1097900 Malus domestica HOM05D003689 ORTHO05D003950 1.9e-10 70.9 38 78.9
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 2.4e-10 70.5 107 40.2
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.4e-10 70.5 110 40.9
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 2.4e-10 70.5 110 40.9
EL10Ac8g18475 Beta vulgaris HOM05D003689 ORTHO05D003950 3.2e-10 70.1 39 71.8
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 3.2e-10 70.1 95 42.1
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 4.2e-10 69.7 103 35.9
Potri.006G242600 Populus trichocarpa HOM05D003689 ORTHO05D003950 4.2e-10 69.7 94 38.3
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 5.4e-10 69.3 106 37.7
Prupe.7G232600 Prunus persica HOM05D003689 ORTHO05D003950 5.4e-10 69.3 89 44.9
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 9.3e-10 68.6 84 46.4
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 1.2e-09 68.2 97 41.2
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 2.7e-09 67.0 108 38.9
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 6.0e-09 65.9 95 40.0
Lj8C603T16 Lonicera japonica HOM05D003689 ORTHO05D003950 6.0e-09 65.9 39 71.8
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 7.8e-09 65.5 109 34.9
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.0e-08 65.1 91 40.7
Dinv41614 Davidia involucrata HOM05D003689 ORTHO05D003950 1.7e-08 64.3 70 50.0
Sc18g0001340 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.7e-08 64.3 100 40.0
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.7e-08 64.3 93 38.7
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 1.7e-08 64.3 93 38.7
Cc06_g09790 Coffea canephora HOM05D003689 ORTHO05D003950 2.3e-08 63.9 92 41.3
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 2.3e-08 63.9 91 39.6
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 3.9e-08 63.2 95 35.8
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 5.1e-08 62.8 95 43.2
Peaxi162Scf00231g00023 Petunia axillaris HOM05D003689 ORTHO05D003950 6.6e-08 62.4 109 37.6
Rhsim02G0182300 Rhododendron simsii HOM05D003689 ORTHO05D003950 2.5e-07 60.5 69 46.4
Solyc07g032380.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.6e-06 57.8 76 44.7
Sc23g0005900 Simmondsia chinensis HOM05D003689 ORTHO05D003950 4.8e-06 56.2 70 42.9


User provided reference genes

Program Settings