Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.7e-80 302.8 173 100.0
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.4e-45 186.0 169 69.2
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.5e-42 176.0 194 57.7
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.6e-41 172.2 202 56.4
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.3e-38 163.7 190 54.7
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.4e-37 159.5 200 57.5
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 3.1e-37 159.1 191 55.5
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 2.0e-36 156.4 199 57.3
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 7.7e-36 154.5 198 55.1
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.3e-35 153.7 180 58.3
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.3e-35 153.7 195 53.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 3.8e-35 152.1 181 54.7
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 6.5e-35 151.4 188 53.2
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 2.5e-34 149.4 187 53.5
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 2.5e-34 149.4 205 50.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 3.2e-34 149.1 203 48.8
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.2e-33 147.1 197 51.8
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 6.1e-33 144.8 180 52.8
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 3.0e-32 142.5 196 49.0
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 3.9e-32 142.1 179 51.4
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 1.5e-31 140.2 178 53.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.0e-31 139.8 196 54.1
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.2e-30 136.3 192 46.9
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 2.8e-30 136.0 179 49.7
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 2.8e-30 136.0 176 51.7
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 2.8e-30 136.0 196 48.5
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 8.2e-30 134.4 201 54.7
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.1e-29 134.0 164 59.8
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.4e-29 133.7 204 47.5
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.8e-29 133.3 188 48.4
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.4e-29 132.9 178 48.9
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 3.1e-29 132.5 202 48.0
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 5.3e-29 131.7 179 47.5
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 5.3e-29 131.7 209 47.4
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.0e-28 129.8 195 47.7
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.0e-28 129.8 187 48.1
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 2.6e-28 129.4 201 46.8
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 3.5e-28 129.0 173 47.4
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 3.5e-28 129.0 183 47.5
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 4.5e-28 128.6 216 44.9
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 5.9e-28 128.3 174 47.1
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.3e-27 127.1 200 44.0
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.3e-27 127.1 200 44.0
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 2.2e-27 126.3 174 47.1
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.9e-27 125.9 210 45.2
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.9e-27 125.9 210 44.8
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.9e-27 125.9 179 49.7
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 5.0e-27 125.2 189 46.0
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.5e-27 124.8 175 46.9
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 8.5e-27 124.4 210 44.8
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 8.5e-27 124.4 175 48.6
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 8.5e-27 124.4 188 46.3
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 8.5e-27 124.4 185 47.6
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.5e-26 123.6 217 44.7
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.9e-26 123.2 193 44.0
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.5e-26 122.9 199 46.7
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 9.4e-26 120.9 179 45.8
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.2e-25 120.6 182 46.7
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 2.7e-25 119.4 177 48.0
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 3.6e-25 119.0 208 43.8
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.0e-24 117.5 187 42.8
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.4e-24 117.1 187 44.9
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.8e-24 116.7 199 44.7
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.8e-24 116.7 136 55.9
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 3.0e-24 115.9 211 44.1
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 6.7e-24 114.8 178 47.2
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 1.5e-23 113.6 191 41.9
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 3.3e-23 112.5 180 47.8
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 5.7e-23 111.7 177 46.9
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.7e-22 110.2 158 43.7
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.3e-22 108.2 181 43.1
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 8.2e-22 107.8 221 39.8
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 8.2e-22 107.8 183 44.3
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.8e-21 106.7 225 37.3
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.1e-21 105.9 210 41.4
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 5.3e-21 105.1 151 48.3
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 9.1e-21 104.4 177 45.2
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 1.2e-20 104.0 163 44.2
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 2.2e-19 99.8 156 44.9
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 2.9e-19 99.4 157 43.9
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.6e-17 93.6 173 42.8
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.6e-17 93.6 173 42.2
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 2.7e-17 92.8 187 44.4
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 6.1e-17 91.7 186 41.4
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.8e-16 90.1 174 40.8
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 2.0e-15 86.7 135 48.9
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 2.0e-15 86.7 165 44.8
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 2.8e-14 82.8 126 38.9
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.4e-13 79.7 177 37.3
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 3.1e-13 79.3 201 35.3
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 7.0e-13 78.2 93 52.7
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.2e-12 77.4 97 48.5
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.6e-12 77.0 135 37.0
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 6.5e-11 71.6 162 35.2
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 4.4e-07 58.9 63 47.6
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 5.7e-07 58.5 63 46.0
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 3.7e-06 55.8 153 34.0
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 8.3e-06 54.7 222 31.1


User provided reference genes

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