Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1772 Trochodendron aralioides HOM05D000289 ORTHO05D000208 1.8e-37 158.7 78 100.0
TAR633G1942 Trochodendron aralioides HOM05D000289 ORTHO05D000208 7.5e-15 83.6 87 52.9
GSVIVG01034020001 Vitis vinifera HOM05D000289 ORTHO05D000208 9.8e-15 83.2 87 54.0
Oeu044368.1 Olea europaea HOM05D000289 ORTHO05D000208 1.3e-14 82.8 87 52.9
MSTRG.5602 Avicennia marina HOM05D000289 ORTHO05D000208 1.1e-13 79.7 87 51.7
Actinidia13788 Actinidia chinensis HOM05D000289 ORTHO05D000208 1.8e-13 79.0 87 51.7
Actinidia29138 Actinidia chinensis HOM05D000289 ORTHO05D000208 3.2e-13 78.2 87 50.6
CSS0038014 Camellia sinensis var. sinensis HOM05D000289 ORTHO05D000208 3.2e-13 78.2 87 50.6
Hma1.2p1_0763F.1_g214550 Hydrangea macrophylla HOM05D000289 ORTHO05D000208 4.1e-13 77.8 87 50.6
Oeu004612.1 Olea europaea HOM05D000289 ORTHO05D000208 4.1e-13 77.8 82 52.4
PGSC0003DMG400020351 Solanum tuberosum HOM05D000289 ORTHO05D000208 4.1e-13 77.8 87 49.4
Gohir.D04G128200 Gossypium hirsutum HOM05D000289 ORTHO05D000208 5.4e-13 77.4 87 50.6
SGA_v2.0_scaffold85G26771 Striga asiatica HOM05D000289 ORTHO05D000208 5.4e-13 77.4 87 50.6
Atru.chr8.2136 Acer truncatum HOM05D000289 ORTHO05D000208 7.0e-13 77.0 87 48.3
arahy.Tifrunner.gnm1.ann1.8XC5FI Arachis hypogaea HOM05D000289 ORTHO05D000208 7.0e-13 77.0 87 49.4
arahy.Tifrunner.gnm1.ann1.ZMM2F7 Arachis hypogaea HOM05D000289 ORTHO05D000208 7.0e-13 77.0 87 49.4
Cpa.g.sc56.103 Carica papaya HOM05D000289 ORTHO05D000208 7.0e-13 77.0 87 49.4
Glyma.03G076200 Glycine max HOM05D000289 ORTHO05D000208 9.2e-13 76.6 87 50.6
Oeu028726.1 Olea europaea HOM05D000289 ORTHO05D000208 9.2e-13 76.6 87 49.4
CANSAT35G1766 Cannabis sativa HOM05D000289 ORTHO05D000208 1.2e-12 76.3 87 48.3
MD12G1159300 Malus domestica HOM05D000289 ORTHO05D000208 1.2e-12 76.3 87 47.1
CSS0027965 Camellia sinensis var. sinensis HOM05D000289 ORTHO05D000208 1.6e-12 75.9 87 49.4
Phvul.010G007900 Phaseolus vulgaris HOM05D000289 ORTHO05D000208 1.6e-12 75.9 87 49.4
VMungo0331G2035 Vigna mungo HOM05D000289 ORTHO05D000208 1.6e-12 75.9 87 49.4
Duzib093G1645 Durio zibethinus HOM05D000289 ORTHO05D000208 2.7e-12 75.1 87 49.4
Gorai.012G111200 Gossypium raimondii HOM05D000289 ORTHO05D000208 2.7e-12 75.1 87 49.4
Nitab4.5_0000008g0580 Nicotiana tabacum HOM05D000289 ORTHO05D000208 2.7e-12 75.1 87 48.3
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 3.5e-12 74.7 87 48.3
COL.COLO4_14618 Corchorus olitorius HOM05D000289 ORTHO05D000208 4.6e-12 74.3 87 49.4
Peaxi162Scf00141g00129 Petunia axillaris HOM05D000289 ORTHO05D000208 4.6e-12 74.3 87 48.3
Potri.016G110200 Populus trichocarpa HOM05D000289 ORTHO05D000208 4.6e-12 74.3 87 48.3
Solyc09g013110.3 Solanum lycopersicum HOM05D000289 ORTHO05D000208 4.6e-12 74.3 87 47.1
Sopen09g006950 Solanum pennellii HOM05D000289 ORTHO05D000208 4.6e-12 74.3 87 47.1
Nitab4.5_0006254g0030 Nicotiana tabacum HOM05D000289 ORTHO05D000208 5.9e-12 73.9 87 48.3
QL07p036162 Quercus lobata HOM05D000289 ORTHO05D000208 5.9e-12 73.9 87 48.3
TWI53G1852 Tripterygium wilfordii HOM05D000289 ORTHO05D000208 5.9e-12 73.9 87 46.0
Manes.09G101400 Manihot esculenta HOM05D000289 ORTHO05D000208 7.8e-12 73.6 87 47.1
CAN.G284.14 Capsicum annuum HOM05D000289 ORTHO05D000208 1.0e-11 73.2 87 48.3
CsaV3_3G034220 Cucumis sativus L. HOM05D000289 ORTHO05D000208 1.3e-11 72.8 87 47.1
Migut.J00233 Erythranthe guttata HOM05D000289 ORTHO05D000208 2.3e-11 72.0 87 47.1
Glyma.01G110500 Glycine max HOM05D000289 ORTHO05D000208 2.3e-11 72.0 106 42.5
Sabra16G0106700 Salix brachista HOM05D000289 ORTHO05D000208 2.3e-11 72.0 87 46.0
ATR0618G248 Amborella trichopoda HOM05D000289 ORTHO05D000208 2.9e-11 71.6 87 44.8
Ciclev10012753m.g Citrus clementina HOM05D000289 ORTHO05D000208 2.9e-11 71.6 85 44.7
Duzib106G0555 Durio zibethinus HOM05D000289 ORTHO05D000208 2.9e-11 71.6 87 47.1
Lalb_Chr07g0193361 Lupinus albus HOM05D000289 ORTHO05D000208 2.9e-11 71.6 87 48.3
Psat7g246960 Pisum sativum HOM05D000289 ORTHO05D000208 2.9e-11 71.6 87 48.3
THA.LOC104805737 Tarenaya hassleriana HOM05D000289 ORTHO05D000208 2.9e-11 71.6 85 44.7
MELO3C009197.2 Cucumis melo HOM05D000289 ORTHO05D000208 3.9e-11 71.2 87 46.0
Eucgr.B02763 Eucalyptus grandis HOM05D000289 ORTHO05D000208 3.9e-11 71.2 87 46.0
vmacro20230 Vaccinium macrocarpon HOM05D000289 ORTHO05D000208 3.9e-11 71.2 87 44.8
AL5G35140 Arabidopsis lyrata HOM05D000289 ORTHO05D000208 5.0e-11 70.9 85 43.5
AT3G54120 Arabidopsis thaliana HOM05D000289 ORTHO05D000208 5.0e-11 70.9 85 43.5
C08p29370 Brassica napus HOM05D000289 ORTHO05D000208 5.0e-11 70.9 85 44.7
BolC8t50538H Brassica oleracea HOM05D000289 ORTHO05D000208 5.0e-11 70.9 85 44.7
RcHm_v2.0_Chr3g0463981 Rosa chinensis HOM05D000289 ORTHO05D000208 5.0e-11 70.9 87 44.8
DCAR_028834 Daucus carota HOM05D000289 ORTHO05D000208 6.6e-11 70.5 87 47.1
SalBow4G0112 Salvia bowleyana HOM05D000289 ORTHO05D000208 6.6e-11 70.5 103 44.7
SalBow4G0666 Salvia bowleyana HOM05D000289 ORTHO05D000208 6.6e-11 70.5 103 44.7
Sed0027484 Sechium edule HOM05D000289 ORTHO05D000208 6.6e-11 70.5 87 43.7
EL10Ac5g11536 Beta vulgaris HOM05D000289 ORTHO05D000208 8.6e-11 70.1 87 42.5
Cc06_g01750 Coffea canephora HOM05D000289 ORTHO05D000208 8.6e-11 70.1 85 45.9
Lj2C78T12 Lonicera japonica HOM05D000289 ORTHO05D000208 1.1e-10 69.7 85 45.9
Lj3g0004721 Lotus japonicus HOM05D000289 ORTHO05D000208 1.1e-10 69.7 87 47.1
Manes.08G087000 Manihot esculenta HOM05D000289 ORTHO05D000208 1.9e-10 68.9 87 47.1
Nn2g13586 Nelumbo nucifera HOM05D000289 ORTHO05D000208 1.9e-10 68.9 89 47.2
PGR031G2795 Punica granatum HOM05D000289 ORTHO05D000208 1.9e-10 68.9 87 43.7
Carub.0005s2071 Capsella rubella HOM05D000289 ORTHO05D000208 2.5e-10 68.6 85 42.4
MD04G1146100 Malus domestica HOM05D000289 ORTHO05D000208 2.5e-10 68.6 87 43.7
TPR.G5227 Trifolium pratense HOM05D000289 ORTHO05D000208 2.5e-10 68.6 87 46.0
Thhalv10010732m.g Eutrema salsugineum HOM05D000289 ORTHO05D000208 3.3e-10 68.2 85 41.2
Medtr4g014700 Medicago truncatula HOM05D000289 ORTHO05D000208 5.6e-10 67.4 87 46.0
BraA07t29881Z Brassica rapa HOM05D000289 ORTHO05D000208 9.5e-10 66.6 102 37.3
FAN09G0024 Fragaria x ananassa HOM05D000289 ORTHO05D000208 1.2e-09 66.2 87 41.4
AUR62025765 Chenopodium quinoa HOM05D000289 ORTHO05D000208 1.6e-09 65.9 85 41.2
Sed0025870 Sechium edule HOM05D000289 ORTHO05D000208 1.6e-09 65.9 87 42.5
BcaC08g44670 Brassica carinata HOM05D000289 ORTHO05D000208 2.1e-09 65.5 102 37.3
A07p21990 Brassica napus HOM05D000289 ORTHO05D000208 2.1e-09 65.5 102 37.3
A09p47110 Brassica napus HOM05D000289 ORTHO05D000208 2.1e-09 65.5 89 39.3
C06p21940 Brassica napus HOM05D000289 ORTHO05D000208 2.1e-09 65.5 102 37.3
BolC6t37379H Brassica oleracea HOM05D000289 ORTHO05D000208 2.1e-09 65.5 102 37.3
BraA09t40173Z Brassica rapa HOM05D000289 ORTHO05D000208 2.1e-09 65.5 85 40.0
FvH4_6g12180 Fragaria vesca HOM05D000289 ORTHO05D000208 2.1e-09 65.5 87 41.4
ClCG10G021750 Citrullus lanatus HOM05D000289 ORTHO05D000208 6.2e-09 63.9 99 41.4
Sp5g08270 Schrenkiella parvula HOM05D000289 ORTHO05D000208 6.2e-09 63.9 85 40.0
BcaB02g07747 Brassica carinata HOM05D000289 ORTHO05D000208 8.0e-09 63.5 102 37.3
Prupe.6G269700 Prunus persica HOM05D000289 ORTHO05D000208 8.0e-09 63.5 98 40.8
Aqoxy1G00734 Aquilegia oxysepala HOM05D000289 ORTHO05D000208 1.8e-08 62.4 85 41.2
HPP92_018185 Vanilla planifolia HOM05D000289 ORTHO05D000208 4.0e-08 61.2 87 39.1
PSO458G0001 Papaver somniferum HOM05D000289 ORTHO05D000208 5.2e-08 60.8 85 38.8
PSO503G0002 Papaver somniferum HOM05D000289 ORTHO05D000208 5.2e-08 60.8 85 38.8
PSO519G0001 Papaver somniferum HOM05D000289 ORTHO05D000208 5.2e-08 60.8 85 38.8
PSO585G0032 Papaver somniferum HOM05D000289 ORTHO05D000208 5.2e-08 60.8 85 38.8
FAN02G3714 Fragaria x ananassa HOM05D000289 ORTHO05D000208 2.6e-07 58.5 87 40.2
CARHR164000 Cardamine hirsuta HOM05D000289 ORTHO05D000208 4.4e-07 57.8 85 37.6
FAN02G1666 Fragaria x ananassa HOM05D000289 ORTHO05D000208 4.4e-07 57.8 101 37.6
PSO384G4042 Papaver somniferum HOM05D000289 ORTHO05D000208 4.4e-07 57.8 85 36.5
ECA248G0246 Erigeron canadensis HOM05D000289 ORTHO05D000208 7.5e-07 57.0 81 40.7


User provided reference genes

Program Settings