Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1763 Trochodendron aralioides HOM05D000475 ORTHO05D000343 2.8e-28 127.9 62 100.0
CSS0003311 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 1.1e-08 62.8 41 75.6
Hma1.2p1_0615F.1_g189900 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 1.4e-08 62.4 41 75.6
Nn2g13362 Nelumbo nucifera HOM05D000475 ORTHO05D000343 1.4e-08 62.4 37 78.4
Cc01_g12980 Coffea canephora HOM05D000475 ORTHO05D000343 1.9e-08 62.0 41 73.2
Migut.D02086 Erythranthe guttata HOM05D000475 ORTHO05D000343 1.9e-08 62.0 41 73.2
MBI05_g28383_MAGBIO Magnolia biondii HOM05D000475 ORTHO05D000343 1.9e-08 62.0 41 73.2
HanXRQChr17g0551461 Helianthus annuus HOM05D000475 ORTHO05D000343 2.4e-08 61.6 41 73.2
Rhsim01G0229100 Rhododendron simsii HOM05D000475 ORTHO05D000343 2.4e-08 61.6 41 73.2
TAR633G1839 Trochodendron aralioides HOM05D000475 ORTHO05D000343 2.4e-08 61.6 41 73.2
Ah.15g097520 Amaranthus hybridus HOM05D000475 ORTHO05D000343 3.2e-08 61.2 41 70.7
CSS0039094 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 3.2e-08 61.2 41 73.2
Lsat_1_v5_gn_5_170020 Lactuca sativa HOM05D000475 ORTHO05D000343 3.2e-08 61.2 41 73.2
Lsat_1_v5_gn_5_170140 Lactuca sativa HOM05D000475 ORTHO05D000343 3.2e-08 61.2 41 73.2
TAR636G2035 Trochodendron aralioides HOM05D000475 ORTHO05D000343 3.2e-08 61.2 41 73.2
Atru.chr3.3942 Acer truncatum HOM05D000475 ORTHO05D000343 4.1e-08 60.8 41 73.2
MSTRG.21214 Avicennia marina HOM05D000475 ORTHO05D000343 4.1e-08 60.8 41 70.7
SalBow3G1693 Salvia bowleyana HOM05D000475 ORTHO05D000343 4.1e-08 60.8 41 73.2
SGA_v2.0_scaffold203G41532 Striga asiatica HOM05D000475 ORTHO05D000343 5.4e-08 60.5 56 55.4
Ciclev10027878m.g Citrus clementina HOM05D000475 ORTHO05D000343 7.1e-08 60.1 41 70.7
QL01p031578 Quercus lobata HOM05D000475 ORTHO05D000343 7.1e-08 60.1 41 68.3
Ah.08g217970 Amaranthus hybridus HOM05D000475 ORTHO05D000343 9.2e-08 59.7 41 70.7
Aqoxy2G02215 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 9.2e-08 59.7 41 70.7
Dinv04176 Davidia involucrata HOM05D000475 ORTHO05D000343 9.2e-08 59.7 41 73.2
Actinidia07029 Actinidia chinensis HOM05D000475 ORTHO05D000343 1.2e-07 59.3 41 70.7
ECA248G2685 Erigeron canadensis HOM05D000475 ORTHO05D000343 1.2e-07 59.3 41 68.3
Oeu022273.1 Olea europaea HOM05D000475 ORTHO05D000343 1.2e-07 59.3 41 73.2
Manes.02G131800 Manihot esculenta HOM05D000475 ORTHO05D000343 1.6e-07 58.9 41 68.3
SGA_v2.0_scaffold41G15694 Striga asiatica HOM05D000475 ORTHO05D000343 1.6e-07 58.9 41 68.3
EL10Ac7g16030 Beta vulgaris HOM05D000475 ORTHO05D000343 2.1e-07 58.5 41 68.3
Haze_24111 Corylus avellana HOM05D000475 ORTHO05D000343 2.1e-07 58.5 41 68.3
Hund18900 Selenicereus undatus HOM05D000475 ORTHO05D000343 2.1e-07 58.5 41 65.9
ATR0559G058 Amborella trichopoda HOM05D000475 ORTHO05D000343 2.7e-07 58.2 41 70.7
AUR62001775 Chenopodium quinoa HOM05D000475 ORTHO05D000343 2.7e-07 58.2 41 65.9
AUR62009563 Chenopodium quinoa HOM05D000475 ORTHO05D000343 2.7e-07 58.2 41 65.9
Dinv17014 Davidia involucrata HOM05D000475 ORTHO05D000343 3.5e-07 57.8 41 70.7
Dinv42963 Davidia involucrata HOM05D000475 ORTHO05D000343 3.5e-07 57.8 41 70.7
Dinv43136 Davidia involucrata HOM05D000475 ORTHO05D000343 3.5e-07 57.8 41 70.7
Sc12g0001480 Simmondsia chinensis HOM05D000475 ORTHO05D000343 4.6e-07 57.4 41 68.3
DCAR_005966 Daucus carota HOM05D000475 ORTHO05D000343 7.8e-07 56.6 41 68.3
Peaxi162Scf00216g00027 Petunia axillaris HOM05D000475 ORTHO05D000343 7.8e-07 56.6 41 68.3
Nitab4.5_0000463g0170 Nicotiana tabacum HOM05D019137 ORTHO05D000343 1.0e-06 56.2 50 56.0
HPP92_019834 Vanilla planifolia HOM05D000475 ORTHO05D000343 1.0e-06 56.2 41 65.9
Lj1C151T1 Lonicera japonica HOM05D000475 ORTHO05D000343 1.3e-06 55.8 41 63.4
Cfa011514 Carpinus fangiana HOM05D000475 ORTHO05D000343 1.7e-06 55.5 41 65.9
CiPaw.13G093100 Carya illinoinensis HOM05D000475 ORTHO05D000343 2.3e-06 55.1 41 65.9
ECA236G2884 Erigeron canadensis HOM05D000475 ORTHO05D000343 5.1e-06 53.9 41 63.4
CAN.G632.5 Capsicum annuum HOM05D000475 ORTHO05D000343 8.6e-06 53.1 41 63.4
Nitab4.5_0003943g0010 Nicotiana tabacum HOM05D000475 ORTHO05D000343 8.6e-06 53.1 41 65.9


User provided reference genes

Program Settings