Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.7e-155 552.7 295 100.0
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 2.9e-152 542.0 295 96.9
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 8.6e-88 327.8 303 63.4
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 1.7e-67 260.4 305 54.8
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 9.3e-66 254.6 301 53.5
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.1e-62 243.4 333 50.8
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 2.8e-62 243.0 303 52.8
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 6.2e-62 241.9 287 54.7
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 1.2e-60 237.7 302 51.7
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 2.6e-60 236.5 318 49.4
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 2.6e-60 236.5 333 50.5
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 4.5e-60 235.7 301 51.5
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.2e-59 233.4 337 49.3
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 2.9e-59 233.0 261 53.6
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 4.9e-59 232.3 300 52.0
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 1.1e-58 231.1 329 47.7
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 1.4e-58 230.7 294 51.0
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 5.5e-58 228.8 337 46.3
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 7.1e-58 228.4 309 50.8
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 9.3e-58 228.0 323 47.7
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 3.5e-57 226.1 303 47.2
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 6.0e-57 225.3 314 50.6
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 6.0e-57 225.3 318 48.4
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 6.0e-57 225.3 309 50.2
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 1.0e-56 224.6 316 49.4
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.8e-56 223.8 309 50.2
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 2.3e-56 223.4 294 52.4
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 2.3e-56 223.4 295 50.5
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 2.3e-56 223.4 296 50.0
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 3.9e-56 222.6 292 50.3
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 6.7e-56 221.9 266 50.8
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 1.1e-55 221.1 330 47.3
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 1.5e-55 220.7 291 48.1
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 3.3e-55 219.5 297 48.8
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 1.3e-54 217.6 320 45.6
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 1.1e-53 214.5 220 56.4
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 1.8e-53 213.8 141 78.0
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 1.8e-53 213.8 317 46.1
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 2.4e-53 213.4 146 76.0
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 2.4e-53 213.4 289 49.8
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 3.1e-53 213.0 308 50.0
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 5.3e-53 212.2 151 72.8
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 2.0e-52 210.3 224 55.8
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 2.0e-52 210.3 297 48.5
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 2.6e-52 209.9 311 46.9
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 2.6e-52 209.9 299 46.5
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 6.5e-51 205.3 143 72.7
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 8.4e-51 204.9 182 62.1
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 1.4e-50 204.1 304 46.1
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 1.9e-50 203.8 265 44.2
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 7.1e-50 201.8 167 67.1
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 9.3e-50 201.4 305 47.2
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 3.5e-49 199.5 173 63.6
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 6.1e-49 198.7 302 45.4
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 3.0e-48 196.4 169 62.7
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 3.9e-48 196.1 286 47.6
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 3.9e-48 196.1 286 47.2
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 3.9e-48 196.1 169 62.7
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 1.9e-47 193.7 171 61.4
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 2.5e-47 193.4 171 60.8
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 3.3e-47 193.0 170 61.8
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 2.2e-46 190.3 262 48.1
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 2.8e-46 189.9 170 61.2
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 2.8e-46 189.9 231 51.9
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 2.8e-46 189.9 177 58.2
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 3.7e-46 189.5 293 47.1
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 4.8e-46 189.1 248 49.2
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 4.8e-46 189.1 171 60.2
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 6.3e-46 188.7 165 63.0
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 6.3e-46 188.7 165 63.0
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 6.3e-46 188.7 165 63.0
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 1.8e-45 187.2 167 63.5
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 2.4e-45 186.8 226 51.3
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 6.9e-45 185.3 243 48.1
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 1.2e-44 184.5 242 49.6
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 1.5e-44 184.1 203 54.2
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 2.0e-44 183.7 172 61.6
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 2.6e-44 183.3 160 62.5
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 3.4e-44 183.0 242 50.0
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 1.7e-43 180.6 172 59.9
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 2.9e-43 179.9 273 46.5
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 3.8e-43 179.5 167 59.9
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 5.0e-43 179.1 171 59.6
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 5.0e-43 179.1 292 43.8
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 5.0e-43 179.1 292 43.8
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 6.5e-43 178.7 145 66.9
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 1.1e-42 177.9 209 49.8
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 4.2e-42 176.0 235 49.8
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 9.4e-42 174.9 235 49.4
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 1.2e-41 174.5 238 47.9
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 2.0e-39 167.2 156 59.0
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 1.8e-37 160.6 111 74.8
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 4.1e-37 159.5 111 74.8
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 1.5e-36 157.5 111 73.9
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 5.0e-35 152.5 111 73.0
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 2.7e-33 146.7 140 57.1
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 1.4e-32 144.4 115 66.1
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 3.9e-32 142.9 125 61.6
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 2.6e-31 140.2 135 55.6
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 4.1e-29 132.9 116 62.1
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 9.1e-29 131.7 165 45.5
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 4.5e-28 129.4 168 45.8
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 5.5e-26 122.5 144 54.2
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.3e-19 101.3 68 73.5
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 6.5e-19 99.0 167 39.5
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.2e-17 94.7 314 32.8
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 1.2e-17 94.7 97 56.7
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 1.0e-16 91.7 120 39.2
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 4.8e-14 82.8 128 35.9
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 8.3e-14 82.0 86 57.0
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 3.1e-13 80.1 229 32.3
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 7.0e-13 79.0 135 37.8
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 3.6e-09 66.6 51 68.6
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 5.7e-07 59.3 52 51.9
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 8.3e-06 55.5 197 36.0


User provided reference genes

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