Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 9.4e-144 513.5 249 100.0
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.9e-48 196.8 258 46.5
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-46 191.0 265 44.2
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.9e-41 172.6 263 41.8
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.4e-38 164.1 252 40.9
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 4.5e-37 159.1 253 38.3
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 6.5e-36 155.2 256 39.8
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 1.6e-34 150.6 255 37.3
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.1e-34 150.2 246 38.6
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 7.9e-34 148.3 246 38.6
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 1.4e-30 137.5 259 32.8
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.4e-30 137.5 246 38.6
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.4e-30 137.5 252 38.1
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 1.8e-30 137.1 243 36.6
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 3.1e-30 136.3 259 35.1
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 3.1e-30 136.3 258 36.8
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 9.1e-30 134.8 250 33.6
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.2e-29 134.4 245 35.9
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.2e-29 134.4 253 36.8
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 2.0e-29 133.7 265 36.2
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.0e-29 133.7 243 33.3
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.0e-29 133.7 245 34.7
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 2.6e-29 133.3 257 36.6
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 2.6e-29 133.3 253 36.0
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 3.4e-29 132.9 245 34.7
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 3.4e-29 132.9 257 34.6
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.5e-29 132.5 250 34.0
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 7.7e-29 131.7 248 35.9
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.7e-29 131.7 250 33.2
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.3e-28 131.0 250 36.8
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.9e-28 129.8 254 36.2
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 3.8e-28 129.4 255 34.9
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 3.8e-28 129.4 255 34.9
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.0e-28 129.0 243 32.9
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.4e-27 127.5 245 34.7
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 3.2e-27 126.3 281 32.4
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 4.2e-27 125.9 245 35.1
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.2e-27 125.2 206 41.7
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 2.7e-26 123.2 258 31.4
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 3.6e-26 122.9 255 34.5
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 4.7e-26 122.5 262 30.9
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 6.1e-26 122.1 262 31.3
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 1.0e-25 121.3 262 30.2
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 5.1e-25 119.0 261 34.5
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 6.7e-25 118.6 259 34.0
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 7.4e-24 115.2 149 40.9
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 1.7e-23 114.0 253 33.2
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 2.8e-23 113.2 240 32.1
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 3.7e-23 112.8 260 32.3
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 3.7e-23 112.8 243 30.5
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 4.8e-23 112.5 269 29.4
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 1.8e-22 110.5 246 32.5
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 2.4e-22 110.2 260 31.9
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 5.3e-22 109.0 286 29.7
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 2.0e-21 107.1 276 29.7
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 2.6e-21 106.7 233 31.3
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 2.6e-21 106.7 262 28.6
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 7.7e-21 105.1 244 30.7
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.0e-20 104.8 244 32.4
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.3e-20 104.4 238 34.0
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 2.9e-20 103.2 245 31.8
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 5.0e-20 102.4 232 32.3
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 5.0e-20 102.4 252 31.3
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 6.5e-20 102.1 237 29.1
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 1.1e-19 101.3 240 29.2
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 1.1e-19 101.3 245 29.4
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 1.9e-19 100.5 245 27.8
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 1.9e-19 100.5 250 30.4
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 2.5e-19 100.1 260 31.2
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 3.2e-19 99.8 247 29.6
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 3.2e-19 99.8 240 28.3
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 4.2e-19 99.4 240 32.1
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 4.2e-19 99.4 242 29.8
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 4.2e-19 99.4 242 31.4
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 1.0e-17 94.7 251 30.7
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 3.0e-17 93.2 251 29.1
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 3.9e-17 92.8 264 29.5
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.0e-16 90.5 182 37.4
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 3.3e-16 89.7 187 33.7
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 4.4e-16 89.4 246 28.0
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 7.4e-16 88.6 240 28.3
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 1.3e-15 87.8 238 26.5
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 2.2e-15 87.0 234 29.9
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.2e-15 87.0 232 30.6
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 6.3e-15 85.5 254 26.0
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 6.3e-15 85.5 97 40.2
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.1e-14 84.7 242 25.2
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 1.8e-14 84.0 246 27.6
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 1.2e-13 81.3 260 30.8
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 5.9e-13 79.0 237 26.6
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 7.7e-13 78.6 137 32.1
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 1.7e-12 77.4 235 26.4
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 3.8e-12 76.3 263 23.2
Zm00001eb434190 Zea mays HOM05D007097 ORTHO05D008131 6.5e-12 75.5 253 27.3
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 1.5e-11 74.3 259 25.5
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 1.2e-10 71.2 75 46.7
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 1.8e-09 67.4 99 33.3
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 4.0e-09 66.2 265 24.2
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 4.0e-09 66.2 149 28.2
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.8e-09 65.1 64 46.9
Nn3g18010 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.7e-08 62.4 75 46.7
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 1.4e-06 57.8 80 33.8
Sc20g0006720 Simmondsia chinensis HOM05D007097 ORTHO05D008131 2.4e-06 57.0 241 25.3
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 3.1e-06 56.6 83 39.8


User provided reference genes

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