Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.5e-124 449.5 225 100.0
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 2.9e-83 312.4 217 72.4
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.0e-80 303.9 193 74.1
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.5e-79 300.1 187 75.9
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.4e-77 293.5 214 69.6
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.2e-76 290.4 182 74.2
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.3e-75 287.0 188 72.9
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 2.4e-74 282.7 190 68.4
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.2e-74 282.3 191 72.8
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 7.1e-74 281.2 186 73.1
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.2e-73 280.4 185 71.9
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.6e-73 280.0 187 70.6
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.6e-73 278.5 187 71.7
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 7.8e-73 277.7 176 75.6
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.0e-72 277.3 175 74.9
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.0e-72 277.3 206 66.0
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.3e-72 276.9 186 71.0
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 3.0e-72 275.8 210 66.7
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 6.6e-72 274.6 187 69.5
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.5e-71 273.5 175 74.9
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.5e-71 273.5 174 74.1
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 5.6e-71 271.6 185 71.9
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 5.6e-71 271.6 202 68.3
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 2.1e-70 269.6 171 74.9
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.8e-70 269.2 162 74.1
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 6.2e-70 268.1 218 61.9
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 6.2e-70 268.1 176 71.6
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 8.1e-70 267.7 181 69.6
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.1e-69 267.3 207 62.3
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.8e-69 266.5 189 67.7
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.4e-69 266.2 171 75.4
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 3.1e-69 265.8 197 66.0
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 7.6e-68 261.2 173 68.8
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 9.9e-68 260.8 197 64.0
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 9.9e-68 260.8 193 66.3
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.7e-67 260.0 169 71.0
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.2e-67 259.6 191 65.4
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 2.2e-67 259.6 222 64.0
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 2.9e-67 259.2 173 69.4
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 6.4e-67 258.1 188 66.5
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.4e-67 258.1 196 62.8
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 1.4e-66 256.9 176 68.2
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.9e-66 256.5 181 66.9
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 3.2e-66 255.8 183 65.6
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 4.2e-66 255.4 176 67.6
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.4e-66 255.0 183 66.1
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 9.3e-66 254.2 171 71.3
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.6e-65 253.4 169 68.0
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 1.6e-65 253.4 176 67.0
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.7e-65 252.7 174 67.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 4.6e-65 251.9 186 67.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 6.0e-65 251.5 175 67.4
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 7.8e-65 251.1 183 65.0
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.0e-64 250.8 221 57.9
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.3e-64 250.4 190 65.3
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.7e-64 250.0 190 65.8
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.7e-64 250.0 175 68.6
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.7e-64 250.0 184 65.2
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 3.0e-64 249.2 190 66.8
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.9e-64 248.8 174 68.4
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.9e-64 248.8 174 68.4
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 3.9e-64 248.8 176 68.8
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.9e-64 248.8 174 68.4
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 3.9e-64 248.8 219 57.5
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 3.9e-64 248.8 173 65.9
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 3.9e-64 248.8 178 68.5
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 6.6e-64 248.1 177 66.1
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 6.6e-64 248.1 180 65.6
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 2.5e-63 246.1 170 66.5
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.3e-62 243.8 189 64.6
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.1e-62 243.0 188 62.8
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.1e-62 243.0 188 62.8
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 2.1e-62 243.0 178 66.9
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 2.8e-62 242.7 198 63.1
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 2.8e-62 242.7 183 65.6
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.8e-62 242.7 176 67.6
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 6.2e-62 241.5 189 64.0
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 8.1e-62 241.1 174 65.5
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 5.3e-61 238.4 160 69.4
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 6.9e-61 238.0 250 52.0
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.0e-60 236.5 187 64.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 2.0e-60 236.5 218 56.4
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.3e-59 233.8 157 66.9
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 9.3e-58 227.6 182 62.6
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.0e-52 209.9 154 68.2
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 3.8e-51 205.7 141 67.4
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 8.4e-51 204.5 181 56.4
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.4e-50 203.8 222 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 4.6e-49 198.7 210 49.5
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.3e-48 197.2 134 70.1
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.8e-48 196.8 134 69.4
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 5.1e-48 195.3 120 71.7
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.1e-47 194.1 160 57.5
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.3e-47 192.6 158 57.6
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.4e-45 187.2 151 60.9
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.8e-45 186.8 143 64.3
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.3e-45 185.3 157 59.2
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.5e-42 176.4 161 58.4
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.5e-39 166.4 152 57.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.8e-35 152.5 119 59.7
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 6.7e-32 141.7 188 47.3
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 4.8e-30 135.6 80 80.0
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 6.9e-29 131.7 80 72.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.5e-20 104.0 121 47.1
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 5.0e-19 99.0 162 36.4
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 7.0e-13 78.6 90 52.2
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 8.5e-11 71.6 44 68.2
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 8.0e-09 65.1 53 54.7
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.0e-08 63.2 41 63.4


User provided reference genes

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