Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1702 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.7e-222 775.0 395 100.0
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.9e-115 419.5 339 69.0
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.2e-69 266.5 138 96.4
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.5e-66 257.7 223 65.0
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.4e-55 219.9 132 87.9
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.1e-52 210.7 119 90.8
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 3.0e-43 180.3 222 48.6
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 2.8e-41 173.7 223 49.3
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 4.5e-39 166.4 236 45.8
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 2.9e-38 163.7 222 49.5
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 5.4e-37 159.5 216 48.1
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 1.6e-36 157.9 242 44.2
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 2.8e-33 147.1 225 45.3
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 3.7e-33 146.7 222 42.3
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 1.8e-32 144.4 224 42.0
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 5.3e-32 142.9 228 42.5
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 9.0e-32 142.1 256 40.2
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 2.9e-30 137.1 229 43.7
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 1.1e-29 135.2 225 41.3
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 4.6e-28 129.8 250 38.0
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 6.0e-28 129.4 226 41.2
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 8.7e-27 125.6 325 35.1
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 2.5e-26 124.0 224 42.0
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 3.3e-26 123.6 225 36.4
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 3.3e-26 123.6 226 40.7
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 6.2e-25 119.4 225 39.1
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 6.2e-25 119.4 229 41.0
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.8e-24 117.9 222 39.2
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 5.3e-24 116.3 222 39.6
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 6.9e-24 115.9 222 39.6
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 6.9e-24 115.9 215 38.6
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.0e-23 114.4 208 39.9
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 4.5e-23 113.2 225 39.6
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 3.8e-22 110.2 226 38.1
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 3.8e-22 110.2 217 36.9
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 1.4e-21 108.2 223 34.1
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 2.5e-21 107.5 223 36.3
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 3.2e-21 107.1 219 38.4
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 5.5e-21 106.3 210 39.0
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 9.3e-21 105.5 222 37.4
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 9.3e-21 105.5 225 38.2
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 3.5e-20 103.6 223 37.2
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 3.5e-20 103.6 239 32.6
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 7.9e-20 102.4 162 43.8
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 3.0e-19 100.5 222 32.9
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 3.9e-19 100.1 221 35.3
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 5.1e-19 99.8 224 36.6
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 6.7e-19 99.4 221 34.4
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 6.7e-19 99.4 229 31.9
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 8.7e-19 99.0 221 35.3
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 1.1e-18 98.6 179 43.0
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 4.3e-18 96.7 229 35.4
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 7.4e-18 95.9 228 35.5
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 9.7e-18 95.5 228 34.6
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 1.3e-17 95.1 225 34.7
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 1.3e-17 95.1 163 40.5
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 3.7e-17 93.6 188 38.3
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 3.7e-17 93.6 229 35.4
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 3.7e-17 93.6 229 35.4
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 3.7e-17 93.6 224 33.0
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 6.3e-17 92.8 225 35.1
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 8.2e-17 92.4 149 38.9
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 1.1e-16 92.0 126 46.0
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 1.4e-16 91.7 216 35.6
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.8e-16 91.3 247 31.6
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 2.4e-16 90.9 228 34.6
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 4.1e-16 90.1 204 33.3
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 9.0e-16 89.0 236 34.3
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 9.0e-16 89.0 231 34.6
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 2.6e-15 87.4 212 34.0
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 3.4e-15 87.0 221 35.3
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 5.9e-15 86.3 223 35.0
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 1.0e-14 85.5 151 42.4
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 2.2e-14 84.3 213 33.3
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 1.1e-13 82.0 229 31.4
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 1.1e-13 82.0 223 33.2
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 4.2e-13 80.1 210 33.8
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 5.5e-13 79.7 205 32.2
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 9.4e-13 79.0 230 34.3
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 1.2e-12 78.6 162 37.7
HanXRQChr04g0117031 Helianthus annuus HOM05D001447 ORTHO05D005923 1.6e-12 78.2 146 39.0
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 1.6e-12 78.2 222 31.5
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 2.1e-12 77.8 187 35.8
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 2.1e-12 77.8 102 47.1
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 2.7e-12 77.4 223 31.8
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 3.6e-12 77.0 129 38.0
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 3.6e-12 77.0 210 33.8
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 3.6e-12 77.0 223 32.7
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 3.6e-12 77.0 209 32.1
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 3.6e-12 77.0 95 52.6
Ca_07826_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005923 4.6e-12 76.6 240 33.3
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 1.0e-11 75.5 167 35.9
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 1.4e-11 75.1 149 38.3
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 1.8e-11 74.7 167 35.3
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 1.8e-11 74.7 134 39.6
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 5.1e-11 73.2 225 32.9
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 6.7e-11 72.8 104 43.3
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 6.7e-11 72.8 220 33.6
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 8.8e-11 72.4 225 32.9
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 1.1e-10 72.0 187 34.8
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 1.1e-10 72.0 191 34.0
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 3.3e-10 70.5 217 33.2
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 1.7e-09 68.2 244 29.5
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 2.8e-09 67.4 210 31.9
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 4.8e-09 66.6 193 31.6
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 1.1e-08 65.5 116 38.8
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 2.4e-08 64.3 109 39.4
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 2.4e-08 64.3 288 24.7
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 9.1e-08 62.4 210 29.5
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 9.1e-08 62.4 210 29.5
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 2.0e-07 61.2 159 37.1
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 3.4e-07 60.5 208 31.7
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 1.3e-06 58.5 222 28.4
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 3.8e-06 57.0 107 33.6
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 5.0e-06 56.6 139 35.3


User provided reference genes

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