Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 6.3e-123 444.1 224 100.0
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 8.9e-53 211.1 283 47.7
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 5.4e-50 201.8 283 47.3
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 4.0e-45 185.7 264 47.0
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 4.4e-44 182.2 272 46.7
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 6.4e-43 178.3 267 46.4
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 9.3e-42 174.5 264 45.5
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 1.6e-41 173.7 265 43.0
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 6.0e-41 171.8 267 44.6
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 1.0e-40 171.0 268 45.1
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 1.7e-40 170.2 268 41.4
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 8.7e-40 167.9 267 41.9
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 1.5e-39 167.2 267 39.7
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 1.9e-39 166.8 252 43.7
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 7.4e-39 164.9 269 40.5
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 4.8e-38 162.2 302 39.4
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 6.2e-38 161.8 260 41.9
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 6.2e-38 161.8 264 42.0
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.8e-37 160.2 264 43.2
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 2.4e-37 159.8 261 43.7
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 5.3e-37 158.7 252 42.1
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 6.9e-37 158.3 274 39.1
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 1.2e-36 157.5 260 42.7
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 1.5e-36 157.1 267 40.1
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.6e-36 156.4 250 42.8
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 3.4e-36 156.0 235 41.7
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.3e-35 154.1 256 41.0
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.2e-35 153.3 273 39.9
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 2.2e-35 153.3 255 41.2
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 4.9e-35 152.1 221 43.0
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 4.2e-34 149.1 239 40.6
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 5.5e-34 148.7 219 43.4
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 7.1e-34 148.3 258 40.3
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 9.3e-34 147.9 197 44.2
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 2.7e-33 146.4 256 41.0
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 4.6e-33 145.6 247 40.9
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 7.9e-33 144.8 266 38.3
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 7.9e-33 144.8 239 41.4
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.0e-32 144.4 243 42.0
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.3e-32 144.1 262 39.7
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 3.0e-32 142.9 270 38.1
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 5.1e-32 142.1 265 38.5
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.1e-32 142.1 262 39.3
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.7e-32 141.7 261 40.2
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 6.7e-32 141.7 252 41.3
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 8.7e-32 141.4 247 37.7
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 8.7e-32 141.4 273 37.7
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.1e-31 141.0 249 37.3
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 1.5e-31 140.6 202 42.6
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 2.5e-31 139.8 258 39.1
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 3.3e-31 139.4 235 39.6
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.3e-31 139.0 270 38.1
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 4.3e-31 139.0 273 37.7
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 5.6e-31 138.7 253 37.2
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 9.6e-31 137.9 273 37.0
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 9.6e-31 137.9 223 40.4
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 9.6e-31 137.9 249 40.6
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 2.1e-30 136.7 272 36.4
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 2.8e-30 136.3 257 38.1
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 2.8e-30 136.3 193 41.5
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 4.8e-30 135.6 253 36.0
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.4e-29 134.0 268 38.4
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.4e-29 134.0 247 40.1
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 1.8e-29 133.7 243 35.8
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 1.5e-28 130.6 192 43.2
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 2.0e-28 130.2 239 37.7
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 3.4e-28 129.4 87 72.4
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 5.8e-28 128.6 83 73.5
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 7.6e-28 128.3 243 36.2
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.3e-27 127.5 197 41.1
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 2.9e-27 126.3 133 53.4
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 3.8e-27 125.9 267 34.8
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 3.8e-27 125.9 250 36.0
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.4e-26 124.0 315 31.4
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 1.9e-26 123.6 271 35.1
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 4.2e-26 122.5 267 35.6
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 1.2e-25 120.9 289 35.6
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 1.2e-25 120.9 274 36.1
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.1e-23 114.4 268 35.8
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.5e-23 114.0 268 35.4
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 9.6e-23 111.3 94 57.4
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.6e-22 110.5 158 45.6
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 2.8e-22 109.8 255 32.5
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 3.1e-21 106.3 149 44.3
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 2.0e-20 103.6 227 34.8
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 5.9e-20 102.1 121 45.5
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 1.3e-19 100.9 82 59.8
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 2.9e-19 99.8 82 58.5
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 2.9e-19 99.8 82 58.5
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 2.9e-19 99.8 82 58.5
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 2.9e-19 99.8 82 58.5
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 2.9e-19 99.8 82 58.5
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 2.9e-19 99.8 82 58.5
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 2.9e-19 99.8 204 39.2
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 3.8e-19 99.4 82 58.5
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 5.0e-19 99.0 79 59.5
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 4.6e-17 92.4 220 31.8
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 4.3e-15 85.9 75 52.0
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 4.3e-15 85.9 81 49.4
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 2.4e-13 80.1 82 42.7
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 2.7e-09 66.6 85 49.4
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 6.1e-09 65.5 68 48.5
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 1.7e-06 57.4 57 50.9
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 2.8e-06 56.6 78 41.0
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 2.8e-06 56.6 78 43.6
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 2.8e-06 56.6 78 43.6
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 8.2e-06 55.1 57 49.1
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 8.2e-06 55.1 64 43.8
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 8.2e-06 55.1 67 44.8


User provided reference genes

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