Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1668 Trochodendron aralioides HOM05D005881 ORTHO05D007298 1.1e-90 336.7 169 100.0
Sc07g0003630 Simmondsia chinensis HOM05D005881 ORTHO05D007298 8.3e-35 151.0 78 91.0
vmacro19838 Vaccinium macrocarpon HOM05D005881 ORTHO05D007298 8.3e-35 151.0 85 83.5
MBI06_g43454_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.8e-34 149.8 87 83.9
Thecc.02G037800 Theobroma cacao HOM05D005881 ORTHO05D007298 2.4e-34 149.4 78 91.0
Aqoxy1G00234 Aquilegia oxysepala HOM05D005881 ORTHO05D007298 1.2e-33 147.1 78 88.5
Lsat_1_v5_gn_9_121521 Lactuca sativa HOM05D005881 ORTHO05D007298 1.2e-33 147.1 78 88.5
Cfa026039 Carpinus fangiana HOM05D005881 ORTHO05D007298 2.0e-33 146.4 78 87.2
CDE08G1319 Ceratophyllum demersum HOM05D005881 ORTHO05D007298 2.0e-33 146.4 76 89.5
Haze_07862 Corylus avellana HOM05D005881 ORTHO05D007298 2.0e-33 146.4 78 87.2
Cc02_g34860 Coffea canephora HOM05D005881 ORTHO05D007298 2.7e-33 146.0 78 87.2
PGR042G2514 Punica granatum HOM05D005881 ORTHO05D007298 2.7e-33 146.0 78 87.2
Potri.004G227500 Populus trichocarpa HOM05D005881 ORTHO05D007298 4.5e-33 145.2 78 88.5
CiPaw.06G026000 Carya illinoinensis HOM05D005881 ORTHO05D007298 5.9e-33 144.8 78 85.9
Duzib052G1237 Durio zibethinus HOM05D005881 ORTHO05D007298 5.9e-33 144.8 78 87.2
PSO017G1314 Papaver somniferum HOM05D005881 ORTHO05D007298 5.9e-33 144.8 78 87.2
Gohir.1Z049413 Gossypium hirsutum HOM05D005881 ORTHO05D007298 7.8e-33 144.4 78 87.2
Gohir.1Z049621 Gossypium hirsutum HOM05D005881 ORTHO05D007298 7.8e-33 144.4 78 87.2
Gohir.D10G000200 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.0e-32 144.1 78 85.9
DCAR_001713 Daucus carota HOM05D005881 ORTHO05D007298 1.3e-32 143.7 75 89.3
Eucgr.K01416 Eucalyptus grandis HOM05D005881 ORTHO05D007298 1.3e-32 143.7 78 84.6
Gohir.A01G000500 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.3e-32 143.7 78 87.2
PSO170G3105 Papaver somniferum HOM05D005881 ORTHO05D007298 1.3e-32 143.7 78 85.9
CSS0041173 Camellia sinensis var. sinensis HOM05D005881 ORTHO05D007298 1.7e-32 143.3 76 88.2
Haze_12831 Corylus avellana HOM05D005881 ORTHO05D007298 2.3e-32 142.9 78 85.9
PSO407G0212 Papaver somniferum HOM05D005881 ORTHO05D007298 2.3e-32 142.9 77 85.7
Gorai.002G000700 Gossypium raimondii HOM05D005881 ORTHO05D007298 2.9e-32 142.5 78 85.9
Manes.10G110680 Manihot esculenta HOM05D005881 ORTHO05D007298 3.9e-32 142.1 78 85.9
Nn2g11943 Nelumbo nucifera HOM05D005881 ORTHO05D007298 3.9e-32 142.1 78 83.3
Solyc01g103190.3 Solanum lycopersicum HOM05D005881 ORTHO05D007298 5.0e-32 141.7 78 80.8
Sopen01g045620 Solanum pennellii HOM05D005881 ORTHO05D007298 5.0e-32 141.7 78 80.8
Ciclev10002996m.g Citrus clementina HOM05D005881 ORTHO05D007298 6.6e-32 141.4 78 83.3
MD09G1270200 Malus domestica HOM05D005881 ORTHO05D007298 6.6e-32 141.4 78 83.3
Oeu010217.3 Olea europaea HOM05D005881 ORTHO05D007298 6.6e-32 141.4 78 83.3
Migut.O00861 Erythranthe guttata HOM05D005881 ORTHO05D007298 8.6e-32 141.0 78 83.3
Peaxi162Scf00450g00736 Petunia axillaris HOM05D005881 ORTHO05D007298 8.6e-32 141.0 78 80.8
Glyma.11G208400 Glycine max HOM05D005881 ORTHO05D007298 1.1e-31 140.6 77 85.7
Glyma.18G045400 Glycine max HOM05D005881 ORTHO05D007298 1.1e-31 140.6 77 85.7
CAN.G855.36 Capsicum annuum HOM05D005881 ORTHO05D007298 1.5e-31 140.2 78 80.8
Hma1.2p1_0052F.1_g029890 Hydrangea macrophylla HOM05D005881 ORTHO05D007298 1.5e-31 140.2 78 84.6
Prupe.1G582900 Prunus persica HOM05D005881 ORTHO05D007298 1.9e-31 139.8 77 84.4
Sopen01g045600 Solanum pennellii HOM05D005881 ORTHO05D007298 1.9e-31 139.8 78 79.5
TWI79G0203 Tripterygium wilfordii HOM05D005881 ORTHO05D007298 1.9e-31 139.8 78 82.1
HanXRQChr17g0543881 Helianthus annuus HOM05D005881 ORTHO05D007298 2.5e-31 139.4 77 84.4
Nitab4.5_0001057g0140 Nicotiana tabacum HOM05D005881 ORTHO05D007298 2.5e-31 139.4 77 80.5
MD17G1268300 Malus domestica HOM05D005881 ORTHO05D007298 3.3e-31 139.0 78 80.8
Oeu003780.1 Olea europaea HOM05D005881 ORTHO05D007298 3.3e-31 139.0 78 80.8
ClCG10G007340 Citrullus lanatus HOM05D005881 ORTHO05D007298 4.3e-31 138.7 77 81.8
Os02g0560450 Oryza sativa ssp. japonica HOM05D005881 ORTHO05D007298 4.3e-31 138.7 79 79.7
Migut.N00857 Erythranthe guttata HOM05D005881 ORTHO05D007298 5.6e-31 138.3 78 82.1
THA.LOC104812459 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 5.6e-31 138.3 79 78.5
Atru.chr6.354 Acer truncatum HOM05D005881 ORTHO05D007298 7.3e-31 137.9 78 79.5
arahy.Tifrunner.gnm1.ann1.8HB0N1 Arachis hypogaea HOM05D005881 ORTHO05D007298 7.3e-31 137.9 77 80.5
Manes.07G028000 Manihot esculenta HOM05D005881 ORTHO05D007298 9.5e-31 137.5 78 82.1
RcHm_v2.0_Chr7g0222581 Rosa chinensis HOM05D005881 ORTHO05D007298 9.5e-31 137.5 78 80.8
Ah.00g001370 Amaranthus hybridus HOM05D005881 ORTHO05D007298 1.2e-30 137.1 80 80.0
ECA246G1780 Erigeron canadensis HOM05D005881 ORTHO05D007298 1.2e-30 137.1 78 83.3
Lj6g0001713 Lotus japonicus HOM05D005881 ORTHO05D007298 1.2e-30 137.1 77 80.5
CANSAT54G2245 Cannabis sativa HOM05D005881 ORTHO05D007298 1.6e-30 136.7 78 80.8
Lalb_Chr18g0053871 Lupinus albus HOM05D005881 ORTHO05D007298 1.6e-30 136.7 77 80.5
QL02p102397 Quercus lobata HOM05D005881 ORTHO05D007298 1.6e-30 136.7 78 82.1
AUR62022918 Chenopodium quinoa HOM05D005881 ORTHO05D007298 2.1e-30 136.3 77 80.5
QL02p103034 Quercus lobata HOM05D005881 ORTHO05D007298 2.1e-30 136.3 78 82.1
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 2.1e-30 136.3 89 73.0
EL10Ac2g04867 Beta vulgaris HOM05D005881 ORTHO05D007298 2.8e-30 136.0 80 78.8
arahy.Tifrunner.gnm1.ann1.6Q1IVA Arachis hypogaea HOM05D005881 ORTHO05D007298 4.7e-30 135.2 77 79.2
arahy.Tifrunner.gnm1.ann1.GZL8T6 Arachis hypogaea HOM05D005881 ORTHO05D007298 4.7e-30 135.2 77 79.2
Sed0016149 Sechium edule HOM05D005881 ORTHO05D007298 4.7e-30 135.2 77 79.2
FvH4_5g29590 Fragaria vesca HOM05D005881 ORTHO05D007298 8.0e-30 134.4 77 79.2
Gohir.1Z049575 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.0e-29 134.0 78 83.3
Gorai.002G000900 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.0e-29 134.0 78 83.3
THA.LOC104812941 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.0e-29 134.0 80 75.0
arahy.Tifrunner.gnm1.ann1.VTJ29R Arachis hypogaea HOM05D005881 ORTHO05D007298 2.3e-29 132.9 91 69.2
Medtr3g064240 Medicago truncatula HOM05D005881 ORTHO05D007298 2.3e-29 132.9 77 79.2
Aa31LG6G3200 Aethionema arabicum HOM05D005881 ORTHO05D007298 3.1e-29 132.5 78 76.9
AL7G32920 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 5.2e-29 131.7 75 80.0
AL3G11760 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 6.8e-29 131.3 75 80.0
AT4G21192 Arabidopsis thaliana HOM05D005881 ORTHO05D007298 6.8e-29 131.3 75 80.0
GSVIVG01023198001 Vitis vinifera HOM05D005881 ORTHO05D007298 1.2e-28 130.6 78 74.4
Carub.0007s2023 Capsella rubella HOM05D005881 ORTHO05D007298 1.5e-28 130.2 75 78.7
Nitab4.5_0002546g0080 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.5e-28 130.2 92 67.4
Thhalv10026658m.g Eutrema salsugineum HOM05D005881 ORTHO05D007298 2.0e-28 129.8 76 77.6
TPR.G37331 Trifolium pratense HOM05D005881 ORTHO05D007298 2.0e-28 129.8 77 76.6
A03p52690 Brassica napus HOM05D005881 ORTHO05D007298 2.6e-28 129.4 81 72.8
Sp7g19280 Schrenkiella parvula HOM05D005881 ORTHO05D007298 2.6e-28 129.4 77 76.6
CARHR227780 Cardamine hirsuta HOM05D005881 ORTHO05D007298 7.5e-28 127.9 75 76.0
BcaC06g30655 Brassica carinata HOM05D005881 ORTHO05D007298 9.8e-28 127.5 75 77.3
C03p83470 Brassica napus HOM05D005881 ORTHO05D007298 1.7e-27 126.7 75 76.0
BcaC01g00708 Brassica carinata HOM05D005881 ORTHO05D007298 2.2e-27 126.3 75 76.0
BolC3t20627H Brassica oleracea HOM05D005881 ORTHO05D007298 2.2e-27 126.3 75 76.0
BraA03t14343Z Brassica rapa HOM05D005881 ORTHO05D007298 2.2e-27 126.3 75 77.3
BraA08t33500Z Brassica rapa HOM05D005881 ORTHO05D007298 2.2e-27 126.3 75 76.0
BcaNung00865 Brassica carinata HOM05D005881 ORTHO05D007298 3.7e-27 125.6 75 76.0
C07p51120 Brassica napus HOM05D005881 ORTHO05D007298 3.7e-27 125.6 75 76.0
BolC7t45612H Brassica oleracea HOM05D005881 ORTHO05D007298 3.7e-27 125.6 75 76.0
Gohir.1Z049313 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.9e-27 125.2 78 79.5
FAN18G0030 Fragaria x ananassa HOM05D005881 ORTHO05D007298 1.4e-26 123.6 94 64.9
PGSC0003DMG400024874 Solanum tuberosum HOM05D005881 ORTHO05D007298 2.4e-26 122.9 113 54.9
Gohir.A01G140426 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.5e-25 119.0 67 85.1
COL.COLO4_17857 Corchorus olitorius HOM05D005881 ORTHO05D007298 6.0e-25 118.2 67 85.1
Gohir.1Z049675 Gossypium hirsutum HOM05D005881 ORTHO05D007298 7.8e-25 117.9 58 89.7
Gohir.1Z049721 Gossypium hirsutum HOM05D005881 ORTHO05D007298 2.3e-24 116.3 128 54.7
Rhsim11G0129900 Rhododendron simsii HOM05D005881 ORTHO05D007298 5.0e-24 115.2 62 87.1
MBI06_g45555_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 6.6e-24 114.8 65 84.6
Haze_20435 Corylus avellana HOM05D005881 ORTHO05D007298 1.1e-23 114.0 64 84.4
CsaV3_3G006580 Cucumis sativus L. HOM05D005881 ORTHO05D007298 1.1e-23 114.0 66 80.3
Gorai.011G000600 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.1e-23 114.0 138 50.7
Cfa026049 Carpinus fangiana HOM05D005881 ORTHO05D007298 1.5e-23 113.6 67 80.6
Cfa021151 Carpinus fangiana HOM05D005881 ORTHO05D007298 2.5e-23 112.8 64 82.8
Zm00001eb244030 Zea mays HOM05D005881 ORTHO05D007298 3.3e-23 112.5 67 76.1
Rhsim06G0200500 Rhododendron simsii HOM05D005881 ORTHO05D007298 5.6e-23 111.7 64 82.8
unitig_22.g6105 Utricularia gibba HOM05D005881 ORTHO05D007298 7.3e-23 111.3 67 79.1
Nitab4.5_0001057g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 4.7e-22 108.6 64 76.6
Mapoly0035s0117 Marchantia polymorpha HOM05D005881 ORTHO05D007298 1.8e-21 106.7 74 64.9
SGA_v2.0_scaffold131G34400 Striga asiatica HOM05D005881 ORTHO05D007298 8.9e-21 104.4 67 71.6
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 2.0e-20 103.2 62 77.4
Phvul.006G085400 Phaseolus vulgaris HOM05D005881 ORTHO05D007298 2.6e-20 102.8 50 86.0
Haze_10676 Corylus avellana HOM05D005881 ORTHO05D007298 7.5e-20 101.3 64 78.1
AagrBONN_evm.TU.Sc2ySwM_117.2390 Anthoceros agrestis HOM05D005881 ORTHO05D007298 9.8e-20 100.9 77 57.1
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 9.8e-20 100.9 53 81.1
EL10Ac4g07780 Beta vulgaris HOM05D000065 ORTHO05D002939 1.3e-19 100.5 68 64.7
EL10Ac4g07877 Beta vulgaris HOM05D005881 ORTHO05D007298 1.3e-19 100.5 68 64.7
A08p15220 Brassica napus HOM05D005881 ORTHO05D007298 2.2e-19 99.8 68 69.1
Haze_09300 Corylus avellana HOM05D005881 ORTHO05D007298 1.4e-18 97.1 64 76.6
BcaC02g10665 Brassica carinata HOM05D005881 ORTHO05D007298 5.1e-16 88.6 48 77.1
C04p26430 Brassica napus HOM05D005881 ORTHO05D007298 5.1e-16 88.6 48 77.1
BolC4t24162H Brassica oleracea HOM05D005881 ORTHO05D007298 5.1e-16 88.6 48 77.1
EL10Ac7g16281 Beta vulgaris HOM05D005881 ORTHO05D007298 1.5e-15 87.0 66 62.1
HPP92_009201 Vanilla planifolia HOM05D005881 ORTHO05D007298 4.3e-15 85.5 49 83.7
MBI06_g35042_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 2.6e-12 76.3 60 63.3
arahy.Tifrunner.gnm1.ann1.0A1TZX Arachis hypogaea HOM05D001400 ORTHO05D016394 9.9e-12 74.3 43 69.8
MELO3C032219.2 Cucumis melo HOM05D005881 ORTHO05D007298 1.4e-10 70.5 35 82.9
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 2.4e-10 69.7 38 76.3
Nitab4.5_0001129g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 7.8e-09 64.7 39 82.1
MCO07G551 Micromonas commoda HOM05D005881 ORTHO05D007298 1.1e-07 60.8 71 38.0
SHI38298 Sapria himalayana HOM05D005881 ORTHO05D000001 7.3e-07 58.2 51 49.0


User provided reference genes

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