Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 5.9e-169 597.4 296 100.0
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 1.4e-138 496.5 298 85.2
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 3.1e-117 425.6 300 73.3
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 2.2e-115 419.5 304 72.0
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 1.2e-113 413.7 310 70.3
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.1e-111 407.1 303 72.3
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 4.7e-110 401.7 310 69.7
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 4.0e-109 398.7 306 68.3
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 6.0e-105 384.8 335 63.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.0e-104 384.0 283 70.3
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 3.9e-104 382.1 309 67.3
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.9e-103 379.8 329 64.1
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.2e-102 377.1 308 65.6
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.3e-101 372.9 313 66.5
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.2e-100 370.5 304 66.8
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 3.4e-100 369.0 313 66.1
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 5.8e-100 368.2 311 66.2
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 5.8e-100 368.2 293 68.9
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 2.2e-99 366.3 302 67.2
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 8.4e-99 364.4 300 65.3
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 3.2e-98 362.5 302 66.2
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.2e-97 360.5 305 64.9
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 2.1e-97 359.8 301 63.1
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 2.7e-97 359.4 300 65.3
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.0e-96 357.5 305 64.3
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-96 357.1 308 63.6
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.3e-96 357.1 299 64.5
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.7e-96 356.7 301 64.5
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.8e-94 349.4 308 63.3
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 6.2e-94 348.2 303 61.4
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 8.1e-94 347.8 309 63.8
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.8e-93 346.7 298 65.1
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 3.4e-92 342.4 299 61.2
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 4.4e-92 342.0 324 60.2
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 5.8e-92 341.7 309 61.2
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 2.2e-91 339.7 294 63.9
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 3.8e-91 339.0 295 61.7
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 3.8e-91 339.0 310 61.3
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 8.4e-91 337.8 304 63.2
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.4e-90 337.0 295 61.7
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.2e-90 335.5 295 61.4
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 4.2e-90 335.5 312 61.5
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.2e-89 334.0 309 60.8
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 4.6e-89 332.0 335 57.6
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.7e-88 330.1 309 60.2
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.3e-88 329.7 299 61.9
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 6.6e-88 328.2 308 58.8
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.3e-86 323.9 295 60.0
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.3e-86 323.9 295 60.0
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 2.8e-86 322.8 300 57.0
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 4.0e-85 318.9 308 58.4
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.6e-84 316.2 300 57.3
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 3.4e-84 315.8 282 61.0
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 4.5e-84 315.5 330 56.4
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.2e-83 313.2 300 56.7
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 8.4e-83 311.2 315 60.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.4e-82 310.5 274 60.6
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 3.2e-82 309.3 300 57.3
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.5e-81 305.8 293 60.1
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 4.6e-81 305.4 301 58.8
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.8e-80 303.5 300 59.7
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 8.7e-80 301.2 263 63.5
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.5e-79 300.4 308 56.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.9e-79 300.1 315 57.8
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 2.5e-79 299.7 318 56.3
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 5.6e-79 298.5 295 59.7
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 7.4e-79 298.1 291 58.4
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.6e-78 297.0 292 57.5
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-78 297.0 305 56.7
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.8e-78 296.2 312 55.1
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 3.6e-78 295.8 290 57.6
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 6.2e-78 295.0 301 56.8
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 8.1e-78 294.7 295 58.0
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.8e-77 293.5 286 59.8
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 4.0e-77 292.4 292 57.9
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.6e-76 289.7 303 56.4
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 3.8e-75 285.8 300 57.7
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 1.4e-74 283.9 284 56.0
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 7.1e-74 281.6 309 53.4
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 6.0e-73 278.5 204 71.1
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 8.7e-72 274.6 353 47.6
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.5e-71 273.1 301 55.1
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 7.4e-71 271.6 342 50.9
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.8e-69 266.9 350 48.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 3.4e-68 262.7 326 52.1
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.1e-66 257.7 390 43.3
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.8e-64 250.4 285 49.1
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 6.3e-62 241.9 300 48.3
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 3.4e-60 236.1 128 85.9
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 2.5e-58 229.9 255 54.9
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.9e-53 211.8 109 86.2
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 9.1e-53 211.5 286 45.8
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.2e-51 206.8 273 44.3
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 3.8e-51 206.1 109 87.2
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.4e-50 204.1 111 85.6
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 3.0e-48 196.4 236 49.6
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 4.8e-46 189.1 291 41.9
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.8e-45 187.2 127 70.1
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.5e-43 178.7 98 85.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.4e-42 177.6 98 83.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 2.5e-42 176.8 95 85.3
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 3.2e-42 176.4 127 64.6
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 2.1e-41 173.7 129 70.5
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 1.3e-38 164.5 203 49.3
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.8e-38 163.3 124 61.3
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 4.5e-36 156.0 224 47.8
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.0e-35 154.8 98 76.5
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 5.0e-35 152.5 115 62.6
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 7.0e-29 132.1 129 56.6
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.3e-27 127.9 207 44.4
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.1e-26 124.8 213 45.5
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 8.6e-19 98.6 199 38.7
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.0e-16 89.7 190 38.9
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 2.6e-15 87.0 93 54.8
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 2.6e-15 87.0 93 54.8
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 4.4e-15 86.3 93 54.8
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 9.8e-15 85.1 97 53.6
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.7e-14 83.2 82 56.1
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.3e-14 82.4 190 36.8
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 4.5e-12 76.3 41 82.9
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.5e-10 71.2 44 75.0
ATR0752G168 Amborella trichopoda HOM05D000182 ORTHO05D007352 1.6e-09 67.8 104 50.0
ATR0582G220 Amborella trichopoda HOM05D000182 ORTHO05D000112 4.7e-09 66.2 103 50.5
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 5.2e-08 62.8 109 40.4
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 6.8e-08 62.4 104 44.2
ATR0629G084 Amborella trichopoda HOM05D000182 ORTHO05D007352 8.9e-08 62.0 101 48.5
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 1.5e-07 61.2 110 39.1
SEGI_28384 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 1.5e-07 61.2 117 42.7
SMO230G0120 Selaginella moellendorffii HOM05D040121 ORTHO05D007352 4.9e-06 56.2 206 28.2


User provided reference genes

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