Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1654 Trochodendron aralioides HOM05D005538 ORTHO05D007055 5.2e-113 411.0 199 100.0
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 3.4e-96 355.1 194 89.2
TAR629G2749 Trochodendron aralioides HOM05D005538 ORTHO05D007055 1.0e-36 157.5 80 91.2
TAR622G0886 Trochodendron aralioides HOM05D005538 ORTHO05D007055 1.6e-32 143.7 80 83.8
TAR371G0765 Trochodendron aralioides HOM05D005538 ORTHO05D007055 3.4e-27 125.9 82 70.7
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 5.9e-24 115.2 84 64.3
TAR629G0377 Trochodendron aralioides HOM05D005538 ORTHO05D007055 2.9e-23 112.8 83 65.1
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 6.6e-23 111.7 55 90.9
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 1.9e-22 110.2 81 64.2
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 4.3e-22 109.0 80 61.2
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 5.6e-22 108.6 83 62.7
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 2.1e-21 106.7 80 61.2
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 3.6e-21 105.9 80 60.0
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 1.0e-20 104.4 81 61.7
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 1.0e-20 104.4 81 65.4
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 3.0e-20 102.8 80 57.5
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 4.0e-20 102.4 83 56.6
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 6.8e-20 101.7 80 58.8
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 1.2e-19 100.9 83 55.4
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 1.5e-19 100.5 83 55.4
Aqoxy3G01758 Aquilegia oxysepala HOM05D005538 ORTHO05D007055 2.6e-19 99.8 86 57.0
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 3.4e-19 99.4 89 55.1
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 3.4e-19 99.4 84 56.0
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 3.4e-19 99.4 84 56.0
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 4.4e-19 99.0 80 57.5
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 4.4e-19 99.0 79 59.5
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 5.7e-19 98.6 78 59.0
Sc04g0010460 Simmondsia chinensis HOM05D005538 ORTHO05D007055 1.7e-18 97.1 83 55.4
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 8.3e-18 94.7 80 53.8
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 1.4e-17 94.0 80 56.2
Potri.001G061900 Populus trichocarpa HOM05D005538 ORTHO05D007055 1.4e-17 94.0 80 52.5
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 1.8e-17 93.6 80 55.0
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 3.2e-17 92.8 80 56.2
MSTRG.469 Avicennia marina HOM05D005538 ORTHO05D007055 9.2e-17 91.3 99 46.5
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 9.2e-17 91.3 80 55.0
EL10Ac6g13582 Beta vulgaris HOM05D005538 ORTHO05D007055 1.2e-16 90.9 89 44.9
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 1.2e-16 90.9 75 56.0
Hma1.2p1_0365F.1_g136780 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 1.6e-16 90.5 75 60.0
Potri.003G165900 Populus trichocarpa HOM05D005538 ORTHO05D007055 2.0e-16 90.1 80 51.2
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 2.0e-16 90.1 78 53.8
Sabra03G0121100 Salix brachista HOM05D005538 ORTHO05D007055 2.7e-16 89.7 80 51.2
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 3.5e-16 89.4 80 52.5
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 3.5e-16 89.4 79 54.4
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 3.5e-16 89.4 80 50.0
Ah.03g135760 Amaranthus hybridus HOM05D005538 ORTHO05D007055 5.9e-16 88.6 83 48.2
Ciclev10033047m.g Citrus clementina HOM05D005538 ORTHO05D007055 5.9e-16 88.6 80 51.2
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 5.9e-16 88.6 80 50.0
Lj3A1076T34 Lonicera japonica HOM05D005538 ORTHO05D007055 5.9e-16 88.6 54 66.7
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 1.0e-15 87.8 83 51.8
C02p05970 Brassica napus HOM05D005538 ORTHO05D007055 1.3e-15 87.4 80 48.8
BolC2t06540H Brassica oleracea HOM05D005538 ORTHO05D007055 1.3e-15 87.4 80 48.8
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 1.3e-15 87.4 80 48.8
CiPaw.06G107500 Carya illinoinensis HOM05D005538 ORTHO05D007055 1.7e-15 87.0 80 52.5
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 1.7e-15 87.0 80 52.5
MELO3C022346.2 Cucumis melo HOM05D005538 ORTHO05D007055 1.7e-15 87.0 80 51.2
CsaV3_6G007860 Cucumis sativus L. HOM05D005538 ORTHO05D007055 1.7e-15 87.0 80 51.2
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 1.7e-15 87.0 80 52.5
Sp6g30790 Schrenkiella parvula HOM05D005538 ORTHO05D007055 3.0e-15 86.3 80 47.5
A02p01730 Brassica napus HOM05D005538 ORTHO05D007055 3.9e-15 85.9 80 47.5
BraA02t05152Z Brassica rapa HOM05D005538 ORTHO05D007055 3.9e-15 85.9 80 47.5
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 3.9e-15 85.9 53 69.8
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 3.9e-15 85.9 80 50.0
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 5.0e-15 85.5 87 47.1
A10p25020 Brassica napus HOM05D005538 ORTHO05D007055 6.6e-15 85.1 80 47.5
Thhalv10014995m.g Eutrema salsugineum HOM05D005538 ORTHO05D007055 6.6e-15 85.1 80 46.2
Lsat_1_v5_gn_6_34980 Lactuca sativa HOM05D005538 ORTHO05D007055 6.6e-15 85.1 98 46.9
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 6.6e-15 85.1 80 48.8
Cc11_g17450 Coffea canephora HOM05D005538 ORTHO05D007055 8.6e-15 84.7 61 57.4
SalBow8G4168 Salvia bowleyana HOM05D005538 ORTHO05D007055 8.6e-15 84.7 78 51.3
ECA246G0794 Erigeron canadensis HOM05D005538 ORTHO05D007055 1.1e-14 84.3 88 47.7
QL03p050357 Quercus lobata HOM05D005538 ORTHO05D007055 1.1e-14 84.3 81 49.4
Aa31LG3G14470 Aethionema arabicum HOM05D005538 ORTHO05D007055 1.5e-14 84.0 80 46.2
BcaNung01169 Brassica carinata HOM05D005538 ORTHO05D007055 1.5e-14 84.0 80 47.5
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 1.5e-14 84.0 80 51.2
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.5e-14 84.0 80 48.8
AT5G13190 Arabidopsis thaliana HOM05D005538 ORTHO05D007055 1.9e-14 83.6 80 46.2
C09p63880 Brassica napus HOM05D005538 ORTHO05D007055 1.9e-14 83.6 80 46.2
BolC9t59228H Brassica oleracea HOM05D005538 ORTHO05D007055 1.9e-14 83.6 80 46.2
Carub.0006s1136 Capsella rubella HOM05D005538 ORTHO05D007055 1.9e-14 83.6 80 46.2
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.9e-14 83.6 73 56.2
HanXRQChr17g0540491 Helianthus annuus HOM05D005538 ORTHO05D007055 1.9e-14 83.6 67 61.2
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 1.9e-14 83.6 53 66.0
THA.LOC104825475 Tarenaya hassleriana HOM05D005538 ORTHO05D007055 1.9e-14 83.6 80 48.8
Duzib248G0674 Durio zibethinus HOM05D005538 ORTHO05D007055 2.5e-14 83.2 80 48.8
Phvul.008G000500 Phaseolus vulgaris HOM05D005538 ORTHO05D007055 2.5e-14 83.2 80 52.5
BraA10t44563Z Brassica rapa HOM05D005538 ORTHO05D007055 3.3e-14 82.8 79 46.8
GSVIVG01000954001 Vitis vinifera HOM05D005538 ORTHO05D007055 4.3e-14 82.4 58 62.1
AL6G23800 Arabidopsis lyrata HOM05D005538 ORTHO05D007055 7.3e-14 81.6 80 45.0
Glyma.08G360100 Glycine max HOM05D005538 ORTHO05D007055 1.6e-13 80.5 81 53.1
Glyma.18G301900 Glycine max HOM05D005538 ORTHO05D007055 1.6e-13 80.5 81 51.9
MD16G1126800 Malus domestica HOM05D005538 ORTHO05D007055 2.1e-13 80.1 80 48.8
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 2.8e-13 79.7 80 46.2
VMungo1383G2546 Vigna mungo HOM05D005538 ORTHO05D007055 2.8e-13 79.7 80 51.2
AUR62028865 Chenopodium quinoa HOM05D005538 ORTHO05D007055 3.6e-13 79.3 95 41.1
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 3.6e-13 79.3 89 44.9
ClCG06G001820 Citrullus lanatus HOM05D005538 ORTHO05D007055 4.7e-13 79.0 80 48.8
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 4.7e-13 79.0 80 47.5
Ah.02g131140 Amaranthus hybridus HOM05D005538 ORTHO05D007055 8.0e-13 78.2 83 43.4
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.1e-12 77.8 53 60.4
Sed0021477 Sechium edule HOM05D005538 ORTHO05D007055 1.8e-12 77.0 80 46.2
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 1.2e-11 74.3 53 54.7
Gohir.A01G021300 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.2e-11 74.3 80 46.2
Hund28220 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.2e-11 74.3 91 42.9
Hund28225 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.2e-11 74.3 91 42.9
Gohir.D01G019700 Gossypium hirsutum HOM05D005538 ORTHO05D007055 2.0e-11 73.6 78 47.4
Gorai.002G022100 Gossypium raimondii HOM05D005538 ORTHO05D007055 2.0e-11 73.6 78 47.4
Gohir.A03G151200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 2.6e-11 73.2 82 43.9
Gohir.D02G174200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 2.6e-11 73.2 82 43.9
Gorai.005G195900 Gossypium raimondii HOM05D005538 ORTHO05D007055 2.6e-11 73.2 82 43.9
Ca_06515_v3 Cicer arietinum L. HOM05D005538 ORTHO05D007055 9.8e-11 71.2 55 56.4
CARHR200280 Cardamine hirsuta HOM05D005538 ORTHO05D007055 1.3e-10 70.9 87 41.4
Medtr7g005440 Medicago truncatula HOM05D005538 ORTHO05D007055 2.9e-10 69.7 51 56.9
Psat3g208320 Pisum sativum HOM05D005538 ORTHO05D007055 6.4e-10 68.6 55 52.7
TPR.G15629 Trifolium pratense HOM05D005538 ORTHO05D007055 1.9e-09 67.0 52 61.5
SalBow8G3396 Salvia bowleyana HOM05D018271 ORTHO05D007055 3.5e-08 62.8 57 56.1
BcaB01g05369 Brassica carinata HOM05D005538 ORTHO05D007055 7.8e-08 61.6 50 50.0
Pp3c26_1170 Physcomitrium patens HOM05D005538 ORTHO05D007055 1.0e-07 61.2 73 42.5
TWI75G1796 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 3.0e-07 59.7 41 63.4
Lj1g0020005 Lotus japonicus HOM05D005538 ORTHO05D007055 5.0e-07 58.9 43 62.8
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 1.5e-06 57.4 77 41.6
Rhsim12G0021000 Rhododendron simsii HOM05D005538 ORTHO05D007055 1.5e-06 57.4 85 37.6
Zm00001eb241880 Zea mays HOM05D005538 ORTHO05D007055 4.3e-06 55.8 76 42.1
SMO271G0002 Selaginella moellendorffii HOM05D005538 ORTHO05D007055 5.6e-06 55.5 61 42.6
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis HOM05D005538 ORTHO05D007055 9.5e-06 54.7 51 43.1


User provided reference genes

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