Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 3.7e-108 394.8 189 100.0
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 2.7e-87 325.5 175 86.3
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 4.7e-87 324.7 175 86.9
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 1.4e-86 323.2 173 86.7
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 8.8e-86 320.5 175 83.4
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 1.5e-85 319.7 176 87.5
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 1.5e-85 319.7 170 85.9
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 1.5e-85 319.7 170 85.9
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 1.1e-83 313.5 174 84.5
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 4.1e-83 311.6 177 82.5
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 5.4e-83 311.2 175 81.1
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 9.1e-83 310.5 173 81.5
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.6e-82 309.7 175 82.3
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 3.5e-82 308.5 179 81.6
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 3.5e-82 308.5 176 77.8
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 3.5e-82 308.5 178 81.5
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 1.7e-81 306.2 176 79.0
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 8.6e-81 303.9 174 80.5
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 3.3e-80 302.0 172 81.4
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 5.5e-80 301.2 170 80.6
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 9.5e-80 300.4 166 81.9
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 1.2e-79 300.1 171 77.8
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 1.2e-79 300.1 172 79.1
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 1.6e-79 299.7 170 79.4
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 2.8e-79 298.9 179 77.7
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 2.8e-79 298.9 177 78.5
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 3.6e-79 298.5 171 78.4
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 3.6e-79 298.5 175 79.4
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 4.7e-79 298.1 171 77.8
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 4.7e-79 298.1 171 77.8
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 4.7e-79 298.1 171 77.8
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 6.1e-79 297.7 179 77.1
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 6.1e-79 297.7 170 78.2
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 6.1e-79 297.7 173 76.3
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 8.0e-79 297.4 172 79.1
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 8.0e-79 297.4 170 79.4
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 1.0e-78 297.0 175 77.1
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 1.0e-78 297.0 170 80.0
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 1.0e-78 297.0 175 78.3
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 1.0e-78 297.0 170 81.2
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.4e-78 296.6 172 78.5
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.8e-78 296.2 172 79.1
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 2.3e-78 295.8 170 79.4
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 2.3e-78 295.8 172 77.3
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 2.3e-78 295.8 178 75.3
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 2.3e-78 295.8 178 75.3
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 3.0e-78 295.4 168 79.8
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 3.0e-78 295.4 175 77.7
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 5.2e-78 294.7 170 78.2
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 6.8e-78 294.3 172 79.1
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 6.8e-78 294.3 166 81.3
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 1.2e-77 293.5 178 83.7
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 1.5e-77 293.1 169 78.1
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.5e-77 293.1 171 76.6
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 1.5e-77 293.1 176 75.6
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 2.6e-77 292.4 167 80.2
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 2.6e-77 292.4 170 78.2
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 3.4e-77 292.0 159 84.9
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 3.4e-77 292.0 167 80.2
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 4.4e-77 291.6 170 78.2
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 4.4e-77 291.6 172 75.6
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 4.4e-77 291.6 166 80.1
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 5.7e-77 291.2 168 78.6
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 5.7e-77 291.2 190 74.7
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 9.8e-77 290.4 169 77.5
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 9.8e-77 290.4 166 78.9
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 9.8e-77 290.4 166 78.9
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 9.8e-77 290.4 169 78.1
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 9.8e-77 290.4 173 79.2
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 2.2e-76 289.3 172 75.6
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 2.8e-76 288.9 176 74.4
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 2.8e-76 288.9 166 79.5
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 2.8e-76 288.9 171 77.2
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 3.7e-76 288.5 169 76.3
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 4.9e-76 288.1 205 68.3
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 8.3e-76 287.3 166 78.9
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 1.1e-75 287.0 176 74.4
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 1.4e-75 286.6 176 75.6
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 1.4e-75 286.6 166 78.9
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 1.8e-75 286.2 169 76.9
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 7.0e-75 284.3 168 75.6
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 9.2e-75 283.9 163 78.5
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 1.2e-74 283.5 166 75.9
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 1.2e-74 283.5 173 75.7
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 1.6e-74 283.1 168 76.2
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 2.0e-74 282.7 170 74.1
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 2.7e-74 282.3 166 78.3
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 3.5e-74 282.0 173 76.3
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 4.5e-74 281.6 171 75.4
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 7.8e-74 280.8 173 75.7
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 7.8e-74 280.8 166 75.3
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 7.8e-74 280.8 168 75.0
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 5.0e-73 278.1 168 73.2
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 8.6e-73 277.3 167 76.6
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.9e-72 276.2 154 81.2
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 2.5e-72 275.8 167 74.3
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 3.3e-72 275.4 168 73.2
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 4.3e-72 275.0 166 75.9
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 4.3e-72 275.0 181 70.2
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 7.3e-72 274.2 196 68.9
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 7.3e-72 274.2 236 59.7
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 9.5e-72 273.9 168 71.4
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 1.2e-71 273.5 170 72.4
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 4.7e-71 271.6 170 73.5
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 4.7e-71 271.6 169 72.2
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 6.1e-71 271.2 168 71.4
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 1.4e-70 270.0 168 71.4
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 2.3e-70 269.2 168 72.0
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 8.9e-70 267.3 168 70.2
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 2.0e-69 266.2 168 70.2
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 2.0e-69 266.2 168 70.2
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 5.8e-69 264.6 168 70.2
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.3e-68 263.5 168 72.6
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.3e-68 263.5 166 71.1
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.3e-68 263.5 168 72.6
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 1.3e-68 263.5 175 68.0
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 2.9e-68 262.3 175 68.6
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 3.7e-68 261.9 179 67.0
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 6.4e-68 261.2 168 70.2
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 1.9e-67 259.6 168 70.2
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.4e-67 259.2 160 75.0
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 9.2e-67 257.3 166 69.9
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 9.2e-67 257.3 160 74.4
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 7.8e-66 254.2 176 66.5
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 1.7e-65 253.1 168 66.1
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 5.0e-65 251.5 204 59.3
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 2.3e-62 242.7 166 67.5
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 1.5e-61 240.0 160 68.8
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 3.4e-61 238.8 181 62.4
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 2.2e-60 236.1 168 67.3
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 5.4e-59 231.5 167 63.5
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 9.2e-59 230.7 171 60.8
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 6.6e-57 224.6 173 59.0
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 8.1e-55 217.6 113 87.6
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 1.1e-54 217.2 169 58.0
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 2.9e-52 209.1 114 86.0
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 9.2e-51 204.1 110 85.5
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 2.3e-49 199.5 168 53.0
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.8e-47 192.6 113 75.2
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 1.1e-46 190.7 122 72.1
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 1.5e-45 186.8 103 85.4
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 2.9e-44 182.6 103 80.6
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 9.2e-43 177.6 174 48.3
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 1.6e-42 176.8 103 78.6
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 8.7e-41 171.0 167 52.7
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 1.9e-40 169.9 178 52.8
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 9.0e-38 161.0 104 69.2
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 1.2e-37 160.6 114 65.8
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 1.5e-37 160.2 108 66.7
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 1.5e-37 160.2 108 66.7
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 4.9e-36 155.2 182 51.1
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 4.2e-35 152.1 85 81.2
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 6.4e-28 128.3 164 38.4
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 1.8e-25 120.2 137 51.8
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 3.9e-25 119.0 72 72.2
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 6.7e-25 118.2 123 52.0
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.2e-20 103.2 63 73.0
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 2.2e-20 103.2 61 80.3
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 9.6e-16 87.8 179 29.6
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 1.2e-13 80.9 79 46.8
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.0e-13 80.1 67 55.2
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.9e-12 76.3 67 55.2
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.4e-11 73.9 68 55.9
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 1.2e-10 70.9 35 85.7
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 5.1e-09 65.5 48 66.7


User provided reference genes

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