Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1579 Trochodendron aralioides HOM05D000336 ORTHO05D011343 8.7e-27 122.9 61 100.0
TAR629G1423 Trochodendron aralioides HOM05D000336 ORTHO05D002301 9.3e-21 102.8 57 87.7
TAR622G0917 Trochodendron aralioides HOM05D000336 ORTHO05D011343 1.3e-17 92.4 57 78.9
TAR374G0074 Trochodendron aralioides HOM05D000336 ORTHO05D002301 5.5e-13 77.0 60 65.0
Actinidia15829 Actinidia chinensis HOM05D000336 ORTHO05D011343 7.2e-13 76.6 57 59.6
Actinidia25599 Actinidia chinensis HOM05D000336 ORTHO05D002301 1.6e-12 75.5 57 59.6
Hma1.2p1_0014F.1_g009800 Hydrangea macrophylla HOM05D000336 ORTHO05D002301 2.7e-12 74.7 57 57.9
vmacro19227 Vaccinium macrocarpon HOM05D000336 ORTHO05D002301 7.9e-12 73.2 57 63.2
Nn3g16544 Nelumbo nucifera HOM05D000336 ORTHO05D002301 3.0e-11 71.2 52 71.2
Lj5A99G67 Lonicera japonica HOM05D000336 ORTHO05D002301 5.1e-11 70.5 58 60.3
Dinv04850 Davidia involucrata HOM05D000336 ORTHO05D002301 8.8e-11 69.7 57 57.9
Dinv11099 Davidia involucrata HOM05D001735 ORTHO05D001640 1.5e-10 68.9 51 62.7
Haze_07254 Corylus avellana HOM05D000336 ORTHO05D002301 2.0e-10 68.6 58 55.2
Oeu045465.1 Olea europaea HOM05D000336 ORTHO05D002301 2.0e-10 68.6 57 54.4
Rhsim08G0186400 Rhododendron simsii HOM05D000336 ORTHO05D002301 2.0e-10 68.6 57 59.6
Cpa.g.sc4.103 Carica papaya HOM05D000336 ORTHO05D002301 3.3e-10 67.8 58 53.4
SalBow1G2186 Salvia bowleyana HOM05D000336 ORTHO05D002301 4.4e-10 67.4 58 56.9
SGA_v2.0_scaffold5G02879 Striga asiatica HOM05D000336 ORTHO05D002301 4.4e-10 67.4 59 50.8
Ciclev10018939m.g Citrus clementina HOM05D000336 ORTHO05D002301 9.7e-10 66.2 57 54.4
MBI11_g00918_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D002301 9.7e-10 66.2 58 63.8
Lsat_1_v5_gn_1_29601 Lactuca sativa HOM05D000336 ORTHO05D002301 1.3e-09 65.9 57 56.1
Cfa018870 Carpinus fangiana HOM05D000336 ORTHO05D002301 1.7e-09 65.5 58 51.7
Manes.06G116700 Manihot esculenta HOM05D000336 ORTHO05D002301 1.7e-09 65.5 57 54.4
TAR622G0764 Trochodendron aralioides HOM05D000336 ORTHO05D002301 1.7e-09 65.5 57 56.1
Prupe.5G154800 Prunus persica HOM05D000336 ORTHO05D002301 2.8e-09 64.7 57 52.6
CiPaw.12G036700 Carya illinoinensis HOM05D000336 ORTHO05D002301 3.7e-09 64.3 57 52.6
Atru.chr9.1024 Acer truncatum HOM05D000336 ORTHO05D002301 4.8e-09 63.9 57 54.4
CSS0041288 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002301 4.8e-09 63.9 51 58.8
CiPaw.11G010900 Carya illinoinensis HOM05D000336 ORTHO05D002301 4.8e-09 63.9 57 54.4
Cc04_g10100 Coffea canephora HOM05D000336 ORTHO05D002301 1.1e-08 62.8 58 56.9
PSO017G5005 Papaver somniferum HOM05D000336 ORTHO05D002301 1.1e-08 62.8 58 55.2
PSO478G3900 Papaver somniferum HOM05D000336 ORTHO05D002301 1.1e-08 62.8 58 55.2
Glyma.04G193800 Glycine max HOM05D000336 ORTHO05D002301 1.4e-08 62.4 58 51.7
Potri.012G094300 Populus trichocarpa HOM05D000336 ORTHO05D002301 2.4e-08 61.6 57 54.4
Sabra15G0113600 Salix brachista HOM05D000336 ORTHO05D002301 2.4e-08 61.6 57 54.4
MSTRG.4589 Avicennia marina HOM05D000336 ORTHO05D002301 3.1e-08 61.2 57 49.1
Lj9A476T60 Lonicera japonica HOM05D000336 ORTHO05D002301 3.1e-08 61.2 53 56.6
Lalb_Chr23g0273531 Lupinus albus HOM05D000336 ORTHO05D002301 4.1e-08 60.8 58 48.3
Psat5g140200 Pisum sativum HOM05D000336 ORTHO05D002301 4.1e-08 60.8 58 48.3
Thecc.03G124700 Theobroma cacao HOM05D000336 ORTHO05D002301 4.1e-08 60.8 58 53.4
Lj1g0013510 Lotus japonicus HOM05D000336 ORTHO05D002301 5.3e-08 60.5 58 50.0
Medtr3g075040 Medicago truncatula HOM05D000336 ORTHO05D002301 5.3e-08 60.5 58 48.3
Sc22g0004180 Simmondsia chinensis HOM05D000336 ORTHO05D002301 5.3e-08 60.5 57 47.4
ClCG06G017730 Citrullus lanatus HOM05D000336 ORTHO05D002301 6.9e-08 60.1 57 54.4
MELO3C026222.2 Cucumis melo HOM05D000336 ORTHO05D002301 6.9e-08 60.1 57 54.4
CsaV3_1G000730 Cucumis sativus L. HOM05D000336 ORTHO05D002301 6.9e-08 60.1 57 54.4
Phvul.009G168100 Phaseolus vulgaris HOM05D000336 ORTHO05D002301 6.9e-08 60.1 58 50.0
VMungo1309G2401 Vigna mungo HOM05D000336 ORTHO05D002301 6.9e-08 60.1 58 50.0
Nitab4.5_0005327g0010 Nicotiana tabacum HOM05D000336 ORTHO05D002301 1.2e-07 59.3 57 49.1
TWI39G0528 Tripterygium wilfordii HOM05D000336 ORTHO05D002301 1.2e-07 59.3 58 50.0
COL.COLO4_16829 Corchorus olitorius HOM05D000336 ORTHO05D002301 1.5e-07 58.9 58 51.7
Sopen03g030240 Solanum pennellii HOM05D000336 ORTHO05D002301 1.5e-07 58.9 57 49.1
EL10As4g23461 Beta vulgaris HOM05D000336 ORTHO05D002301 2.0e-07 58.5 57 47.4
Potri.015G091800 Populus trichocarpa HOM05D000336 ORTHO05D002301 2.0e-07 58.5 57 52.6
arahy.Tifrunner.gnm1.ann1.ER9ILG Arachis hypogaea HOM05D000336 ORTHO05D002301 3.4e-07 57.8 58 48.3
arahy.Tifrunner.gnm1.ann1.Z1QYPE Arachis hypogaea HOM05D000336 ORTHO05D002301 3.4e-07 57.8 58 48.3
Lalb_Chr11g0069671 Lupinus albus HOM05D000336 ORTHO05D002301 4.5e-07 57.4 58 46.6
Sabra12G0068900 Salix brachista HOM05D000336 ORTHO05D002301 4.5e-07 57.4 57 50.9
Glyma.06G172300 Glycine max HOM05D000336 ORTHO05D002301 5.9e-07 57.0 58 46.6
PGSC0003DMG400015197 Solanum tuberosum HOM05D000336 ORTHO05D002301 1.0e-06 56.2 57 47.4
Lj4g0005343 Lotus japonicus HOM05D000336 ORTHO05D002301 1.3e-06 55.8 54 51.9
MD14G1162200 Malus domestica HOM05D000336 ORTHO05D002301 1.3e-06 55.8 57 50.9
Manes.14G054300 Manihot esculenta HOM05D000336 ORTHO05D002301 1.3e-06 55.8 58 51.7
Nitab4.5_0001664g0090 Nicotiana tabacum HOM05D000336 ORTHO05D002301 1.3e-06 55.8 57 47.4
FvH4_5g07690 Fragaria vesca HOM05D000336 ORTHO05D002301 1.7e-06 55.5 57 47.4
FAN13G0472 Fragaria x ananassa HOM05D000336 ORTHO05D002301 1.7e-06 55.5 57 47.4
FAN18G3420 Fragaria x ananassa HOM05D000336 ORTHO05D002301 1.7e-06 55.5 57 47.4
Aqoxy5G03521 Aquilegia oxysepala HOM05D000336 ORTHO05D002301 2.2e-06 55.1 53 52.8
RcHm_v2.0_Chr7g0190781 Rosa chinensis HOM05D000336 ORTHO05D002301 2.2e-06 55.1 57 47.4
Sed0016561 Sechium edule HOM05D000336 ORTHO05D002301 2.2e-06 55.1 58 50.0
TAR626G1926 Trochodendron aralioides HOM05D000336 ORTHO05D002301 2.2e-06 55.1 32 78.1
FAN08G3307 Fragaria x ananassa HOM05D000336 ORTHO05D002301 3.8e-06 54.3 57 47.4
Nitab4.5_0000955g0010 Nicotiana tabacum HOM05D000336 ORTHO05D002301 3.8e-06 54.3 57 47.4
Aqoxy3G01450 Aquilegia oxysepala HOM05D000336 ORTHO05D002301 5.0e-06 53.9 58 46.6
QL10p004732 Quercus lobata HOM05D000336 ORTHO05D002301 5.0e-06 53.9 58 50.0
TPR.G26156 Trifolium pratense HOM05D000336 ORTHO05D002301 5.0e-06 53.9 59 45.8
CAN.G352.45 Capsicum annuum HOM05D000336 ORTHO05D002301 6.5e-06 53.5 57 45.6
Gohir.A09G245900 Gossypium hirsutum HOM05D000336 ORTHO05D002301 8.5e-06 53.1 59 45.8
Sed0015066 Sechium edule HOM05D000336 ORTHO05D002301 8.5e-06 53.1 57 49.1


User provided reference genes

Program Settings