Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 4.0e-243 844.3 434 100.0
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 3.4e-165 585.5 434 70.5
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 3.2e-155 552.4 436 67.2
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 9.2e-155 550.8 436 67.0
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 3.3e-152 542.3 437 68.0
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 1.6e-151 540.0 382 73.3
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 2.8e-151 539.3 434 66.6
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 3.8e-148 528.9 442 64.9
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.6e-146 523.5 434 65.2
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 4.6e-146 521.9 438 63.9
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 6.0e-146 521.5 440 65.5
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.1e-144 517.3 434 64.5
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.9e-144 516.5 434 65.0
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 2.5e-144 516.2 382 70.9
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 2.1e-143 513.1 435 64.8
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 6.2e-143 511.5 436 64.0
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 2.6e-141 506.1 434 63.4
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 7.6e-141 504.6 441 63.7
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 7.6e-141 504.6 429 63.9
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 8.4e-140 501.1 423 65.0
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.1e-139 500.7 441 62.8
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.9e-139 500.0 440 63.0
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 1.2e-138 497.3 440 63.9
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 2.3e-137 493.0 423 65.0
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 1.1e-136 490.7 440 62.0
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 4.3e-136 488.8 434 60.6
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.3e-135 487.3 442 61.3
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 1.3e-135 487.3 435 60.0
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 3.6e-135 485.7 442 61.5
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 6.2e-135 485.0 440 61.1
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 8.1e-135 484.6 442 60.4
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 1.1e-134 484.2 423 63.8
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 3.1e-134 482.6 451 60.5
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 1.5e-133 480.3 443 61.2
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 5.8e-133 478.4 439 62.6
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 7.6e-133 478.0 416 63.7
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 4.2e-131 472.2 441 57.6
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 7.4e-128 461.5 393 62.1
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 9.6e-128 461.1 370 67.0
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 1.3e-127 460.7 436 58.7
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 2.1e-127 459.9 425 58.8
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 6.2e-127 458.4 377 65.5
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 3.4e-125 452.6 377 64.7
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.3e-124 450.7 441 58.3
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.3e-124 450.7 391 61.4
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 1.7e-124 450.3 442 56.8
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 4.2e-123 445.7 417 57.3
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 2.1e-122 443.4 407 60.0
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 6.7e-121 438.3 436 57.6
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 6.7e-121 438.3 437 57.7
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 6.7e-121 438.3 516 51.6
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 1.5e-120 437.2 388 59.5
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 1.5e-120 437.2 390 60.8
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 3.3e-120 436.0 416 56.0
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 7.4e-120 434.9 440 53.6
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 1.1e-118 431.0 434 52.3
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 3.8e-116 422.5 429 53.8
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.1e-115 421.0 428 52.6
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 1.4e-115 420.6 434 51.4
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 4.2e-115 419.1 435 51.5
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 7.1e-115 418.3 427 53.4
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 1.6e-114 417.2 434 51.4
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 4.6e-114 415.6 428 52.3
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 1.0e-113 414.5 425 52.2
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 8.7e-113 411.4 435 51.5
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 1.5e-112 410.6 454 50.7
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 3.3e-112 409.5 441 52.8
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 5.7e-112 408.7 433 52.2
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 7.4e-112 408.3 438 52.1
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 9.7e-112 407.9 304 71.7
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 3.7e-111 406.0 441 52.8
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 3.7e-111 406.0 319 67.7
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 1.1e-110 404.4 434 50.7
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 1.5e-109 400.6 405 56.3
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 4.5e-109 399.1 458 48.9
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 2.5e-104 383.3 391 54.0
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 3.7e-103 379.4 445 51.7
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 9.1e-102 374.8 424 51.4
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 1.3e-100 370.9 550 44.2
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 1.4e-99 367.5 329 62.3
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.1e-98 362.1 347 59.9
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 5.1e-97 359.0 389 51.4
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 2.6e-96 356.7 356 57.3
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 4.4e-96 355.9 389 50.6
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 7.4e-96 355.1 389 51.7
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 8.2e-95 351.7 434 47.2
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 8.5e-92 341.7 449 45.9
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.5e-91 340.9 444 44.6
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 1.6e-85 320.9 442 45.0
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 2.0e-85 320.5 394 47.7
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.2e-84 317.0 216 74.5
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 4.7e-82 309.3 365 48.5
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 1.8e-81 307.4 352 50.3
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 4.4e-80 302.8 341 49.0
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 3.1e-78 296.6 201 73.6
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.6e-77 294.3 393 48.1
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 4.7e-74 282.7 250 58.4
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 2.3e-68 263.8 432 41.4
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 8.6e-68 261.9 288 51.0
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 1.5e-56 224.6 437 37.1
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 5.4e-54 216.1 245 49.0
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 1.6e-53 214.5 323 41.2
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 7.1e-46 189.1 373 33.8
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 4.3e-43 179.9 418 32.5
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 5.6e-43 179.5 120 75.0
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 3.6e-42 176.8 389 33.4
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 4.0e-41 173.3 390 33.3
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 2.6e-40 170.6 296 40.5
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 3.5e-37 160.2 169 55.0
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 3.8e-31 140.2 149 55.7
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 2.7e-29 134.0 466 27.9
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 1.3e-26 125.2 123 56.9
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 2.1e-26 124.4 111 60.4
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 6.4e-23 112.8 272 35.3
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 4.3e-19 100.1 160 43.1
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 1.4e-09 68.6 72 51.4
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 2.4e-09 67.8 86 50.0
Thhalv10015964m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 3.4e-08 63.9 159 35.2
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 8.4e-07 59.3 74 45.9
COL.COLO4_14761 Corchorus olitorius HOM05D006045 ORTHO05D007678 3.2e-06 57.4 66 51.5
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 4.2e-06 57.0 75 46.7
Glyma.10G191650 Glycine max HOM05D006045 ORTHO05D007678 9.3e-06 55.8 104 35.6


User provided reference genes

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