Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 2.2e-76 288.9 148 100.0
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 2.4e-38 162.5 174 55.7
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 8.6e-36 154.1 174 52.3
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 2.5e-35 152.5 176 52.8
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 7.3e-35 151.0 177 54.2
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 9.5e-35 150.6 176 52.8
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 9.5e-35 150.6 172 52.9
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.1e-34 149.4 174 51.7
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 2.1e-34 149.4 174 51.7
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 4.7e-34 148.3 177 50.8
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 4.7e-34 148.3 176 51.7
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 8.0e-34 147.5 173 51.4
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.4e-33 146.7 101 69.3
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 1.4e-33 146.7 177 50.3
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.4e-33 146.7 174 50.6
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 1.4e-33 146.7 104 68.3
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 1.8e-33 146.4 132 61.4
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 2.3e-33 146.0 175 49.7
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 3.0e-33 145.6 138 54.3
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 6.8e-33 144.4 174 50.0
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 6.8e-33 144.4 177 49.2
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 8.9e-33 144.1 177 49.2
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.2e-32 143.7 181 47.0
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.5e-32 143.3 176 48.9
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 2.0e-32 142.9 102 67.6
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 2.0e-32 142.9 177 48.6
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.4e-32 142.1 178 50.0
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 3.4e-32 142.1 139 55.4
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 4.4e-32 141.7 136 57.4
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 4.4e-32 141.7 179 50.3
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 5.8e-32 141.4 180 49.4
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 7.5e-32 141.0 183 49.2
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 7.5e-32 141.0 182 48.4
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 9.8e-32 140.6 124 59.7
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 9.8e-32 140.6 155 54.2
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.3e-31 140.2 174 48.9
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 2.9e-31 139.0 134 56.7
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 3.7e-31 138.7 174 48.3
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 8.3e-31 137.5 177 48.0
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 8.3e-31 137.5 177 48.0
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 8.3e-31 137.5 177 48.0
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 8.3e-31 137.5 184 45.7
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 8.3e-31 137.5 138 55.1
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 8.3e-31 137.5 178 47.8
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 1.1e-30 137.1 121 61.2
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.1e-30 137.1 181 48.1
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.1e-30 137.1 175 48.6
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 1.9e-30 136.3 132 53.8
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.9e-30 136.3 177 47.5
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 1.9e-30 136.3 112 61.6
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 2.4e-30 136.0 138 54.3
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.4e-30 136.0 142 52.8
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 2.4e-30 136.0 130 56.2
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 3.2e-30 135.6 148 52.0
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 3.2e-30 135.6 177 48.6
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 3.2e-30 135.6 135 55.6
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 4.1e-30 135.2 136 53.7
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.1e-30 135.2 112 58.9
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 5.4e-30 134.8 132 53.8
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 9.2e-30 134.0 163 50.3
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 9.2e-30 134.0 177 48.6
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 9.2e-30 134.0 180 47.2
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.6e-29 133.3 136 52.9
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 1.6e-29 133.3 147 52.4
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.0e-29 132.9 130 53.8
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 4.6e-29 131.7 182 46.2
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 4.6e-29 131.7 103 61.2
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 7.8e-29 131.0 175 47.4
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.0e-28 130.6 134 52.2
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 1.7e-28 129.8 132 53.0
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 2.3e-28 129.4 134 50.7
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 2.3e-28 129.4 137 52.6
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 2.3e-28 129.4 181 45.3
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 3.0e-28 129.0 185 43.2
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 3.0e-28 129.0 185 43.2
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.0e-28 129.0 158 47.5
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 3.9e-28 128.6 101 61.4
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 3.9e-28 128.6 177 45.8
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 5.0e-28 128.3 133 51.9
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 6.6e-28 127.9 167 47.9
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 8.6e-28 127.5 146 50.0
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 1.5e-27 126.7 124 54.0
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.5e-27 126.7 106 60.4
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 2.5e-27 125.9 179 44.7
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 3.3e-27 125.6 125 54.4
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 4.3e-27 125.2 141 49.6
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 7.3e-27 124.4 124 54.0
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 7.3e-27 124.4 125 53.6
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 9.5e-27 124.0 125 53.6
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 9.5e-27 124.0 125 53.6
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 9.5e-27 124.0 125 53.6
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 1.6e-26 123.2 177 44.6
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 2.1e-26 122.9 133 48.1
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 2.1e-26 122.9 179 43.6
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.1e-26 122.9 158 47.5
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 4.7e-26 121.7 178 43.3
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.1e-25 120.6 133 51.1
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.8e-25 119.8 104 58.7
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.5e-24 116.7 118 53.4
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 5.6e-19 98.2 101 45.5
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 2.8e-18 95.9 92 51.1
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 2.8e-18 95.9 122 50.0
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.6e-18 95.5 177 39.0
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 3.6e-18 95.5 92 51.1
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 6.2e-18 94.7 148 38.5
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.4e-14 83.6 147 40.8
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 4.1e-14 82.0 102 41.2
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 8.6e-12 74.3 115 44.3
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 3.8e-07 58.9 58 48.3
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 3.2e-06 55.8 75 48.0


User provided reference genes

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