Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 7.4e-58 226.9 105 100.0
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 3.6e-44 181.4 101 81.2
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 7.9e-44 180.3 101 79.2
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 3.9e-43 177.9 102 79.4
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 6.7e-43 177.2 96 82.3
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 8.8e-43 176.8 105 75.2
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.1e-42 176.4 102 78.4
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.5e-42 176.0 99 78.8
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 2.0e-42 175.6 105 75.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 3.3e-42 174.9 105 74.3
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 4.3e-42 174.5 93 82.8
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 5.7e-42 174.1 107 74.8
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 3.7e-41 171.4 101 74.3
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.4e-40 169.5 101 73.3
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.8e-40 169.1 102 72.5
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.8e-40 169.1 106 74.5
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.1e-40 168.3 102 74.5
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 3.1e-40 168.3 106 69.8
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.2e-39 166.4 99 75.8
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.5e-39 166.0 102 73.5
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 1.5e-39 166.0 101 72.3
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.0e-39 165.6 102 71.6
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 5.9e-39 164.1 102 74.5
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 7.7e-39 163.7 102 71.6
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.0e-38 163.3 97 74.2
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.0e-38 163.3 122 63.1
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.7e-38 162.5 99 74.7
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.7e-38 162.5 102 70.6
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.7e-38 162.5 100 73.0
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 6.5e-38 160.6 102 70.6
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 1.4e-37 159.5 100 67.0
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 1.9e-37 159.1 99 72.7
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 2.5e-37 158.7 102 69.6
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 4.2e-37 157.9 100 69.0
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 9.4e-37 156.8 103 69.9
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.2e-36 156.4 105 66.7
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 1.2e-36 156.4 106 65.1
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 1.6e-36 156.0 93 73.1
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-36 156.0 104 66.3
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.6e-36 156.0 104 66.3
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 2.1e-36 155.6 95 69.5
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 2.1e-36 155.6 92 73.9
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.7e-36 155.2 98 70.4
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 4.7e-36 154.5 108 66.7
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 4.7e-36 154.5 104 66.3
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 4.7e-36 154.5 102 69.6
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 6.1e-36 154.1 108 64.8
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 7.9e-36 153.7 103 68.9
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 1.0e-35 153.3 103 68.9
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.0e-35 153.3 98 69.4
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.9e-35 151.4 112 62.5
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.9e-35 151.4 104 65.4
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 5.1e-35 151.0 105 64.8
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 5.1e-35 151.0 105 65.7
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-34 149.8 104 64.4
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.1e-34 149.8 98 69.4
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 3.3e-34 148.3 103 64.1
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.3e-34 148.3 104 63.5
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 3.3e-34 148.3 105 62.9
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 3.3e-34 148.3 107 64.5
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 4.4e-34 147.9 102 62.7
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.7e-34 147.5 107 62.6
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 7.4e-34 147.1 107 64.5
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 4.8e-33 144.4 79 77.2
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 6.3e-33 144.1 99 64.6
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.1e-32 143.3 100 63.0
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-32 142.9 108 61.1
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.4e-32 142.1 100 65.0
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 2.4e-32 142.1 92 66.3
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 5.3e-32 141.0 75 78.7
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 7.0e-32 140.6 104 61.5
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.2e-31 139.8 75 77.3
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 3.5e-31 138.3 78 74.4
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 4.5e-31 137.9 92 65.2
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 7.7e-31 137.1 102 57.8
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 7.7e-31 137.1 102 57.8
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 2.2e-30 135.6 100 61.0
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 2.2e-30 135.6 100 60.0
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 2.9e-30 135.2 100 61.0
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 3.8e-30 134.8 108 57.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 5.0e-30 134.4 101 59.4
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.0e-30 134.4 109 59.6
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.5e-30 133.7 95 63.2
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.9e-29 132.5 101 60.4
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 7.2e-29 130.6 100 61.0
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 1.2e-28 129.8 100 57.0
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.6e-28 129.4 100 59.0
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 1.6e-28 129.4 77 71.4
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 2.1e-28 129.0 104 58.7
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.1e-28 129.0 103 56.3
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 2.7e-28 128.6 100 57.0
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 4.7e-28 127.9 78 71.8
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 4.7e-28 127.9 75 74.7
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 8.0e-28 127.1 104 56.7
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.8e-27 125.9 78 73.1
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.8e-27 125.9 107 51.4
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.8e-27 125.9 134 47.8
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.3e-27 125.6 98 53.1
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 5.2e-27 124.4 98 53.1
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 8.8e-27 123.6 119 50.4
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 1.5e-26 122.9 75 69.3
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.0e-26 122.5 117 52.1
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.6e-26 122.1 78 67.9
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 3.3e-26 121.7 78 67.9
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 7.5e-26 120.6 123 48.0
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 9.7e-26 120.2 117 50.4
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 9.7e-26 120.2 117 50.4
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 2.8e-25 118.6 79 63.3
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 3.7e-25 118.2 118 49.2
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 3.7e-25 118.2 69 79.7
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 4.8e-25 117.9 117 47.9
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.4e-24 116.3 74 66.2
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.4e-24 115.5 74 74.3
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 3.1e-24 115.2 73 72.6
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.6e-23 112.8 70 68.6
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.7e-22 109.4 70 64.3
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.2e-21 105.1 69 68.1
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.6e-20 102.8 77 59.7
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.7e-20 102.1 64 68.8
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 1.7e-17 92.8 63 66.7
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 7.0e-16 87.4 97 43.3
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.2e-15 86.7 117 41.9
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.2e-15 86.7 50 74.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 1.0e-11 73.6 50 68.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 3.0e-11 72.0 40 80.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 8.8e-11 70.5 40 70.0
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.2e-09 65.9 89 34.8
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 1.2e-07 60.1 52 53.8


User provided reference genes

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