Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.0e-88 328.6 174 100.0
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.5e-87 325.5 174 99.4
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 4.5e-44 181.8 174 59.2
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 2.0e-39 166.4 173 56.6
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 2.0e-39 166.4 173 56.6
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 2.0e-39 166.4 173 56.6
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 1.3e-38 163.7 173 57.2
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 2.2e-38 162.9 144 65.3
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 5.9e-36 154.8 172 54.7
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 8.5e-35 151.0 178 54.5
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 3.6e-33 145.6 184 51.1
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 3.0e-32 142.5 173 50.9
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 3.0e-32 142.5 172 50.0
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 6.8e-32 141.4 177 52.5
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.5e-31 140.2 173 52.0
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 5.7e-31 138.3 168 48.2
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 7.5e-31 137.9 175 50.9
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 2.8e-30 136.0 172 49.4
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.8e-29 133.3 176 48.9
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 2.4e-29 132.9 174 50.0
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 7.0e-29 131.3 149 53.7
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 2.7e-28 129.4 166 51.8
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 2.7e-28 129.4 171 48.0
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 2.7e-28 129.4 116 64.7
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 3.5e-28 129.0 151 50.3
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.5e-28 129.0 172 49.4
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.0e-27 127.5 170 50.0
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.3e-27 127.1 177 50.8
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.7e-27 126.7 175 48.6
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.7e-27 126.7 175 48.6
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.7e-27 126.7 107 67.3
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 2.3e-27 126.3 152 50.0
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 2.3e-27 126.3 172 49.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.9e-27 125.9 171 48.5
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.8e-27 125.6 172 48.8
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.5e-27 124.8 170 48.8
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 6.5e-27 124.8 179 47.5
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 6.5e-27 124.8 105 68.6
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.1e-26 124.0 113 67.3
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 2.5e-26 122.9 167 48.5
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 3.3e-26 122.5 175 50.3
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 3.3e-26 122.5 177 48.0
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 3.3e-26 122.5 169 47.9
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 4.2e-26 122.1 174 47.1
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 4.2e-26 122.1 175 50.9
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 1.6e-25 120.2 117 62.4
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.1e-25 119.8 188 48.9
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.6e-25 119.0 168 49.4
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 1.0e-24 117.5 172 50.0
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 2.3e-24 116.3 169 50.9
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 3.0e-24 115.9 154 50.6
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 8.9e-24 114.4 204 43.1
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 2.6e-23 112.8 182 47.3
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 5.7e-23 111.7 136 49.3
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 5.7e-23 111.7 151 52.3
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 1.3e-22 110.5 109 63.3
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.7e-22 110.2 182 46.2
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 2.2e-22 109.8 145 53.8
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 4.9e-22 108.6 175 44.6
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 6.3e-22 108.2 168 48.2
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 8.3e-22 107.8 172 44.2
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 8.3e-22 107.8 171 44.4
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.4e-21 107.1 165 43.0
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.4e-21 107.1 112 55.4
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 3.1e-21 105.9 174 46.0
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 3.1e-21 105.9 158 46.2
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 3.1e-21 105.9 182 45.1
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 5.4e-21 105.1 170 44.7
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.2e-20 104.0 139 50.4
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.6e-20 103.6 111 54.1
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.7e-20 102.8 116 56.0
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 3.5e-20 102.4 151 47.7
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.5e-20 102.4 105 59.0
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 5.9e-20 101.7 177 41.8
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 1.3e-19 100.5 112 55.4
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 2.9e-19 99.4 110 56.4
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 2.9e-19 99.4 110 56.4
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 2.9e-19 99.4 110 56.4
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 6.6e-19 98.2 146 42.5
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 8.6e-19 97.8 113 54.9
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 8.6e-19 97.8 167 41.9
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 7.3e-18 94.7 114 52.6
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 9.5e-18 94.4 189 41.3
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 6.1e-17 91.7 174 46.6
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 8.0e-17 91.3 111 50.5
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.4e-16 90.5 182 40.1
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.0e-16 89.4 144 44.4
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 8.9e-16 87.8 173 42.2
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.2e-15 87.4 173 45.1
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 2.6e-15 86.3 148 43.9
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 3.4e-15 85.9 178 41.6
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 1.3e-14 84.0 151 41.7
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.7e-14 83.6 139 41.7
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 6.4e-14 81.6 174 40.8
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 9.2e-13 77.8 144 43.8
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.2e-12 77.4 146 40.4
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 1.0e-11 74.3 125 46.4
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 5.0e-11 72.0 171 39.2
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.5e-10 70.5 148 40.5
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 4.7e-09 65.5 127 40.2
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.8e-08 63.5 69 55.1
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 3.4e-07 59.3 165 33.9
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 9.8e-07 57.8 50 62.0
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 9.8e-07 57.8 50 62.0
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 9.8e-07 57.8 50 62.0
TWI31G0635 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.3e-06 57.4 140 37.1
Potri.009G034951 Populus trichocarpa HOM05D007264 ORTHO05D008639 2.2e-06 56.6 60 56.7


User provided reference genes

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