Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.5e-115 419.5 205 100.0
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.7e-80 302.4 227 70.9
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 4.3e-78 295.0 228 67.5
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 4.9e-74 281.6 207 70.5
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 8.4e-74 280.8 215 68.4
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 8.4e-74 280.8 222 65.8
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 1.4e-73 280.0 209 68.9
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 3.2e-73 278.9 211 68.7
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 4.2e-73 278.5 219 67.6
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 9.3e-73 277.3 214 68.7
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.6e-72 276.6 211 68.2
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 1.6e-72 276.6 213 68.5
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 2.1e-72 276.2 215 67.9
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 2.7e-72 275.8 217 67.3
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 4.6e-72 275.0 221 67.9
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 1.3e-71 273.5 221 65.2
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 1.8e-71 273.1 211 68.2
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 5.1e-71 271.6 214 65.9
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 6.7e-71 271.2 207 67.6
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 8.7e-71 270.8 230 64.3
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 1.1e-70 270.4 214 66.4
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 1.5e-70 270.0 201 68.7
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 1.9e-70 269.6 213 68.5
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 2.5e-70 269.2 212 67.0
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.3e-70 268.9 218 65.1
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 5.6e-70 268.1 230 63.5
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.6e-70 268.1 218 65.6
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 9.6e-70 267.3 223 65.5
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 9.6e-70 267.3 202 68.8
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 9.6e-70 267.3 211 66.8
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.6e-69 266.5 221 64.7
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 2.1e-69 266.2 213 67.6
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 2.8e-69 265.8 201 65.7
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.8e-69 265.8 218 64.7
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 3.7e-69 265.4 218 64.7
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 3.7e-69 265.4 212 65.6
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 4.8e-69 265.0 218 64.7
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 1.1e-68 263.8 218 63.8
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 1.4e-68 263.5 243 58.8
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 2.4e-68 262.7 212 63.7
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 2.4e-68 262.7 229 62.9
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 2.4e-68 262.7 211 64.0
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 2.4e-68 262.7 207 66.2
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 3.1e-68 262.3 212 63.2
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 3.1e-68 262.3 213 66.7
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 6.9e-68 261.2 218 65.1
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 6.9e-68 261.2 218 64.2
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 9.0e-68 260.8 213 67.1
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 1.2e-67 260.4 211 63.5
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.0e-67 259.6 218 64.7
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 2.0e-67 259.6 213 65.7
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 4.5e-67 258.5 211 64.9
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 5.8e-67 258.1 209 64.1
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 5.8e-67 258.1 211 64.0
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 7.6e-67 257.7 217 63.1
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.3e-66 256.9 203 65.5
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 1.7e-66 256.5 199 65.3
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 3.8e-66 255.4 212 63.2
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 4.9e-66 255.0 209 66.0
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 1.1e-65 253.8 219 61.6
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 1.9e-65 253.1 217 61.3
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 7.1e-65 251.1 214 63.1
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 6.0e-64 248.1 207 63.3
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 1.3e-63 246.9 212 63.2
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 1.3e-63 246.9 190 65.8
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 5.1e-63 245.0 211 60.7
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 1.5e-62 243.4 212 63.7
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 3.3e-62 242.3 178 68.5
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 4.3e-62 241.9 204 63.7
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 5.7e-62 241.5 211 62.6
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 5.7e-62 241.5 211 62.6
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 5.7e-62 241.5 211 62.6
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 5.7e-62 241.5 214 61.7
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 5.7e-62 241.5 211 61.6
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 7.4e-62 241.1 214 61.7
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 9.6e-62 240.7 212 61.8
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 2.1e-61 239.6 205 61.5
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 2.8e-61 239.2 209 62.7
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 3.7e-61 238.8 211 61.6
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 4.8e-61 238.4 212 61.8
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.5e-59 233.4 204 58.8
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 4.5e-59 231.9 213 60.1
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 1.1e-57 227.3 178 69.1
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 5.5e-57 224.9 178 66.3
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 7.2e-57 224.6 178 64.0
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 5.7e-54 214.9 270 46.7
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 8.2e-53 211.1 127 76.4
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 3.1e-52 209.1 212 56.6
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.6e-51 206.1 138 71.7
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 3.4e-51 205.7 135 71.1
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 5.9e-51 204.9 164 59.1
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 1.1e-49 200.7 180 61.1
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 9.7e-46 187.6 214 47.7
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 3.1e-44 182.6 121 69.4
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.1e-41 174.1 105 74.3
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 3.0e-39 166.0 188 43.6
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 2.6e-38 162.9 227 42.3
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 1.6e-32 143.7 211 42.7
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 3.0e-31 139.4 140 57.9
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 5.2e-31 138.7 121 59.5
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 8.8e-31 137.9 138 47.1
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.1e-28 131.0 117 50.4
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 5.0e-26 122.1 87 66.7
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 8.5e-26 121.3 81 66.7
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 1.2e-24 117.5 82 65.9
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 9.1e-20 101.3 192 29.7
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 1.2e-19 100.9 67 59.7
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 5.9e-19 98.6 64 71.9
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 5.9e-19 98.6 51 82.4
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 7.2e-17 91.7 116 35.3
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 9.5e-17 91.3 115 51.3
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.2e-16 90.9 208 26.9
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 2.8e-13 79.7 127 44.1
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 2.4e-12 76.6 127 41.7
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 9.5e-09 64.7 62 54.8
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 3.4e-06 56.2 58 62.1


User provided reference genes

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