Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.1e-251 871.3 442 100.0
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.2e-226 789.6 442 90.7
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 1.9e-216 755.7 444 86.9
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.1e-215 752.3 437 87.0
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 6.2e-215 750.7 442 86.7
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 1.9e-211 739.2 439 85.6
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 6.0e-210 734.2 431 84.9
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 3.0e-209 731.9 438 84.2
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 1.9e-208 729.2 443 84.4
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 3.3e-208 728.4 442 83.3
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 2.1e-207 725.7 437 84.2
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.7e-207 724.5 441 84.1
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 3.1e-206 721.8 442 83.5
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 6.9e-206 720.7 430 85.3
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 2.2e-204 715.7 434 83.9
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 1.9e-203 712.6 443 82.4
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 2.4e-203 712.2 459 80.4
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 4.2e-203 711.4 451 81.8
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 1.6e-202 709.5 439 83.1
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.6e-202 709.5 441 82.3
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.1e-202 709.1 444 80.9
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 3.9e-201 704.9 442 80.8
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 3.9e-201 704.9 440 81.6
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 6.6e-201 704.1 431 83.5
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 8.7e-201 703.7 431 82.6
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.5e-200 703.0 437 83.3
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 1.9e-200 702.6 440 81.1
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 1.9e-200 702.6 442 82.4
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 4.3e-200 701.4 439 81.3
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 5.6e-200 701.0 444 80.9
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 9.6e-200 700.3 443 81.0
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 9.6e-200 700.3 443 81.0
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 1.3e-199 699.9 441 79.6
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 1.6e-199 699.5 442 81.7
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 2.1e-199 699.1 439 81.3
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 2.1e-199 699.1 441 79.8
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.8e-199 698.7 434 81.8
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 2.8e-199 698.7 439 79.7
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 8.1e-199 697.2 434 82.0
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 8.1e-199 697.2 442 80.5
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.4e-198 696.4 444 80.4
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 1.8e-198 696.0 429 81.6
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 1.8e-198 696.0 430 81.4
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 2.4e-198 695.7 442 80.8
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 2.4e-198 695.7 435 81.8
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 5.3e-198 694.5 414 83.6
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.3e-198 694.5 441 79.6
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.3e-198 694.5 439 80.4
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.0e-198 693.7 441 79.8
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 9.0e-198 693.7 441 79.8
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 9.0e-198 693.7 444 79.3
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 1.5e-197 693.0 409 84.6
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.5e-197 693.0 441 80.0
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.5e-197 693.0 430 81.6
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.0e-197 692.6 439 80.4
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 3.4e-197 691.8 428 83.2
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 3.4e-197 691.8 443 80.8
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 4.5e-197 691.4 438 81.7
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 4.5e-197 691.4 557 67.1
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 5.8e-197 691.0 429 81.4
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 5.8e-197 691.0 429 81.4
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 5.8e-197 691.0 430 81.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 9.9e-197 690.3 435 79.8
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.7e-196 689.5 431 81.4
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.7e-196 689.5 432 81.5
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 2.9e-196 688.7 429 81.1
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 1.4e-195 686.4 446 79.6
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 1.9e-195 686.0 429 80.4
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.2e-194 683.3 429 80.4
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.2e-194 683.3 474 75.9
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 1.6e-194 682.9 429 79.5
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 1.6e-194 682.9 429 79.5
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 1.6e-194 682.9 429 79.5
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.6e-194 682.9 430 80.2
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 1.6e-194 682.9 429 80.0
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 2.1e-194 682.6 429 81.1
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 2.7e-194 682.2 437 78.7
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 3.5e-194 681.8 520 70.8
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 6.0e-194 681.0 429 79.7
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 6.0e-194 681.0 437 78.9
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 1.0e-193 680.2 429 80.0
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 1.0e-193 680.2 429 80.0
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.3e-193 679.9 429 79.5
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 1.8e-193 679.5 430 80.0
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 2.3e-193 679.1 429 79.5
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 3.0e-193 678.7 429 79.0
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 3.0e-193 678.7 429 79.5
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 3.0e-193 678.7 430 79.5
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 3.0e-193 678.7 431 81.4
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 3.0e-193 678.7 490 73.9
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 3.9e-193 678.3 429 79.5
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 3.9e-193 678.3 437 77.6
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 3.9e-193 678.3 430 79.8
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 3.9e-193 678.3 428 79.9
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 6.7e-193 677.6 429 79.3
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 6.7e-193 677.6 435 78.6
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.7e-193 677.6 429 81.6
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 8.7e-193 677.2 436 78.2
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 8.7e-193 677.2 429 80.0
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.9e-192 676.0 435 79.5
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 4.3e-192 674.9 429 81.6
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 7.4e-192 674.1 429 78.8
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.6e-191 672.9 429 81.1
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.1e-191 672.5 394 85.0
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 4.8e-191 671.4 434 80.2
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 1.1e-190 670.2 436 78.4
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.8e-190 669.5 429 80.9
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.4e-190 669.1 439 77.2
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 5.3e-190 667.9 430 78.6
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 2.0e-189 666.0 433 78.8
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 2.0e-189 666.0 435 79.3
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 5.8e-189 664.5 432 77.1
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 7.6e-189 664.1 435 78.4
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.9e-189 663.7 439 75.4
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 1.4e-187 659.8 429 79.0
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 7.1e-187 657.5 438 77.4
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 1.3e-183 646.7 445 75.3
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.6e-183 646.4 468 73.9
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 3.7e-183 645.2 436 76.6
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.2e-183 644.4 429 78.6
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.4e-182 643.3 427 77.8
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.2e-180 636.0 429 75.8
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.4e-179 633.3 396 79.5
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.9e-179 632.9 400 79.0
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 3.2e-179 632.1 431 76.1
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 3.3e-176 622.1 434 74.0
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 8.2e-175 617.5 398 80.2
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 8.2e-175 617.5 409 77.8
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.1e-174 617.1 429 72.3
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.1e-174 617.1 430 73.5
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 5.9e-173 611.3 395 76.7
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.8e-172 608.6 431 74.7
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 4.5e-165 585.1 354 81.9
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 8.5e-164 580.9 363 79.6
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 1.4e-163 580.1 350 86.0
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 4.2e-163 578.6 363 81.0
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 6.1e-162 574.7 344 84.9
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 3.0e-161 572.4 345 86.1
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 8.2e-159 564.3 431 70.1
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 4.1e-158 562.0 338 84.3
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 2.2e-151 539.7 361 72.9
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 3.1e-150 535.8 428 66.8
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 4.0e-145 518.8 323 79.3
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 2.2e-143 513.1 380 69.7
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 6.3e-143 511.5 348 75.6
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 3.5e-141 505.8 373 68.9
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 1.5e-139 500.4 374 70.1
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.4e-129 467.2 261 86.6
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 2.5e-123 446.4 332 67.2
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 3.1e-121 439.5 302 74.2
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 9.8e-120 434.5 270 83.0
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 2.7e-117 426.4 398 58.5
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 6.4e-103 378.6 233 82.8
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 1.4e-94 350.9 232 76.7
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.2e-94 349.4 243 71.6
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.3e-87 327.8 188 89.4
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.6e-83 312.4 192 82.8
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 6.9e-81 305.4 366 46.7
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 2.2e-79 300.4 356 49.7
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.3e-71 274.6 188 73.9
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.3e-71 274.6 188 73.9
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.2e-69 268.1 167 74.9
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 6.1e-61 239.2 221 62.4
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 4.3e-59 233.0 147 79.6
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.8e-58 230.3 245 56.7
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 9.7e-43 178.7 157 60.5
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 2.6e-40 170.6 99 83.8
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.0e-36 156.8 297 40.1
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 2.4e-33 147.5 220 47.3
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 6.3e-26 122.9 82 75.6
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 1.3e-23 115.2 60 96.7
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 3.0e-20 104.0 82 68.3
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 9.8e-19 99.0 63 79.4
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 9.8e-19 99.0 63 79.4
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 1.8e-17 94.7 79 63.3
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.9e-16 89.7 90 52.2
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 1.3e-15 88.6 65 70.8
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 2.3e-15 87.8 47 93.6
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 6.6e-15 86.3 46 87.0
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 3.7e-10 70.5 43 76.7
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 4.1e-09 67.0 74 50.0
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 1.2e-08 65.5 74 51.4
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 1.6e-08 65.1 43 69.8
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 2.0e-08 64.7 42 78.6
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 1.0e-07 62.4 74 50.0
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 8.6e-07 59.3 28 89.3


User provided reference genes

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