Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1225 Trochodendron aralioides HOM05D000081 ORTHO05D000036 1.2e-39 166.0 82 100.0
TAR369G0567 Trochodendron aralioides HOM05D000081 ORTHO05D000036 6.6e-30 133.7 82 78.0
Dinv09679 Davidia involucrata HOM05D000081 ORTHO05D000036 2.4e-24 115.2 73 71.2
Thecc.09G358800 Theobroma cacao HOM05D000081 ORTHO05D000036 2.7e-23 111.7 81 59.3
TAR633G0018 Trochodendron aralioides HOM05D000081 ORTHO05D000036 2.7e-23 111.7 76 68.4
TAR636G0650 Trochodendron aralioides HOM05D000081 ORTHO05D000036 6.0e-23 110.5 80 63.8
Cfa011787 Carpinus fangiana HOM05D000081 ORTHO05D000036 7.9e-23 110.2 81 63.0
COL.COLO4_11164 Corchorus olitorius HOM05D000081 ORTHO05D000036 3.0e-22 108.2 83 60.2
Dinv35420 Davidia involucrata HOM05D000081 ORTHO05D000036 5.1e-22 107.5 83 65.1
Haze_24423 Corylus avellana HOM05D000081 ORTHO05D000036 7.4e-21 103.6 82 61.0
QL01p025907 Quercus lobata HOM05D000081 ORTHO05D000036 1.3e-20 102.8 80 61.2
Cpa.g.sc2.345 Carica papaya HOM05D000081 ORTHO05D000036 1.6e-20 102.4 78 61.5
CiPaw.13G068200 Carya illinoinensis HOM05D000081 ORTHO05D000036 1.6e-20 102.4 75 62.7
Hma1.2p1_1692F.1_g297980 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 2.1e-20 102.1 78 66.7
FAN21G1801 Fragaria x ananassa HOM05D000081 ORTHO05D000036 3.7e-20 101.3 75 61.3
FAN16G2813 Fragaria x ananassa HOM05D000081 ORTHO05D000036 4.8e-20 100.9 81 61.7
FAN11G0874 Fragaria x ananassa HOM05D000081 ORTHO05D000036 1.1e-19 99.8 81 60.5
MD03G1057400 Malus domestica HOM05D000081 ORTHO05D000036 1.1e-19 99.8 80 65.0
CiPaw.14G053400 Carya illinoinensis HOM05D000081 ORTHO05D000036 2.4e-19 98.6 64 73.4
Duzib168G0414 Durio zibethinus HOM05D000081 ORTHO05D000036 3.1e-19 98.2 82 57.3
Actinidia32602 Actinidia chinensis HOM05D000081 ORTHO05D000036 3.4e-18 94.7 77 61.0
CSS0013701 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 5.8e-18 94.0 73 61.6
FAN25G2604 Fragaria x ananassa HOM05D000081 ORTHO05D000036 1.0e-17 93.2 72 61.1
Glyma.14G200200 Glycine max HOM05D000081 ORTHO05D000036 1.0e-17 93.2 76 63.2
Phvul.008G251300 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 1.0e-17 93.2 76 63.2
Aqoxy4G02186 Aquilegia oxysepala HOM05D000081 ORTHO05D000036 1.3e-17 92.8 82 58.5
VMungo0647G1508 Vigna mungo HOM05D000081 ORTHO05D000036 1.3e-17 92.8 76 64.5
Lalb_Chr04g0251901 Lupinus albus HOM05D000081 ORTHO05D000036 2.2e-17 92.0 74 66.2
MD11G1059400 Malus domestica HOM05D000081 ORTHO05D000036 2.9e-17 91.7 79 60.8
RcHm_v2.0_Chr5g0071811 Rosa chinensis HOM05D000081 ORTHO05D000036 4.9e-17 90.9 72 58.3
Eucgr.B04010 Eucalyptus grandis HOM05D000081 ORTHO05D000036 6.5e-17 90.5 82 57.3
Lalb_Chr10g0103641 Lupinus albus HOM05D000081 ORTHO05D000036 1.4e-16 89.4 77 62.3
Duzib170G1084 Durio zibethinus HOM05D000081 ORTHO05D000036 5.5e-16 87.4 78 48.7
Nn2g13282 Nelumbo nucifera HOM05D000081 ORTHO05D000036 7.1e-16 87.0 83 56.6
Prupe.6G046900 Prunus persica HOM05D000081 ORTHO05D000036 9.3e-16 86.7 88 52.3
CSS0049619 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 1.2e-15 86.3 79 57.0
Glyma.02G232600 Glycine max HOM05D000081 ORTHO05D000036 1.2e-15 86.3 77 59.7
vmacro02911 Vaccinium macrocarpon HOM05D000081 ORTHO05D000036 1.6e-15 85.9 77 58.4
TWI74G0796 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 2.1e-15 85.5 81 55.6
Rhsim13G0063200 Rhododendron simsii HOM05D000081 ORTHO05D000036 3.5e-15 84.7 69 65.2
MBI15_g01639_MAGBIO Magnolia biondii HOM05D000081 ORTHO05D000036 6.0e-15 84.0 78 60.3
MBI15_g36613_MAGBIO Magnolia biondii HOM05D000081 ORTHO05D000036 6.0e-15 84.0 78 59.0
Hma1.2p1_0501F.1_g167280 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 7.9e-15 83.6 83 54.2
Hma1.2p1_2488F.1_g323160 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 7.9e-15 83.6 83 54.2
Gohir.D03G143400 Gossypium hirsutum HOM05D000081 ORTHO05D000036 1.3e-14 82.8 71 52.1
Gorai.003G150700 Gossypium raimondii HOM05D000081 ORTHO05D000036 1.3e-14 82.8 71 52.1
Manes.18G098700 Manihot esculenta HOM05D000081 ORTHO05D000036 1.8e-14 82.4 84 52.4
Manes.09G112700 Manihot esculenta HOM05D000081 ORTHO05D000036 2.3e-14 82.0 82 54.9
vmacro14623 Vaccinium macrocarpon HOM05D000081 ORTHO05D000036 2.3e-14 82.0 77 54.5
Atru.chr1.2580 Acer truncatum HOM05D000081 ORTHO05D000036 3.0e-14 81.6 80 53.8
arahy.Tifrunner.gnm1.ann1.5V6QPU Arachis hypogaea HOM05D000081 ORTHO05D000036 5.1e-14 80.9 85 56.5
Ciclev10000654m.g Citrus clementina HOM05D000081 ORTHO05D000036 6.7e-14 80.5 74 52.7
Rhsim01G0241100 Rhododendron simsii HOM05D000081 ORTHO05D000036 6.7e-14 80.5 76 56.6
CANSAT54G1433 Cannabis sativa HOM05D000081 ORTHO05D000036 8.7e-14 80.1 77 62.3
CSS0013638 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 1.1e-13 79.7 80 55.0
CSS0037160 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 1.1e-13 79.7 80 55.0
GSVIVG01030258001 Vitis vinifera HOM05D000081 ORTHO05D000036 1.1e-13 79.7 79 54.4
Cc01_g14950 Coffea canephora HOM05D000081 ORTHO05D000036 1.9e-13 79.0 69 59.4
COL.COLO4_14525 Corchorus olitorius HOM05D000081 ORTHO05D000036 2.5e-13 78.6 75 53.3
Gohir.A03G025100 Gossypium hirsutum HOM05D000081 ORTHO05D000036 2.5e-13 78.6 71 52.1
Solyc06g066370.4 Solanum lycopersicum HOM05D000081 ORTHO05D000036 2.5e-13 78.6 68 58.8
TWI31G0345 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 2.5e-13 78.6 81 54.3
Sabra16G0130100 Salix brachista HOM05D000081 ORTHO05D000036 3.3e-13 78.2 79 50.6
Sopen06g021620 Solanum pennellii HOM05D000081 ORTHO05D000036 4.3e-13 77.8 68 57.4
Lalb_Chr17g0345461 Lupinus albus HOM05D000081 ORTHO05D000036 7.4e-13 77.0 76 57.9
Nn2g11035 Nelumbo nucifera HOM05D000081 ORTHO05D000036 7.4e-13 77.0 81 55.6
Thecc.05G005600 Theobroma cacao HOM05D000081 ORTHO05D000036 7.4e-13 77.0 79 48.1
Rhsim05G0226500 Rhododendron simsii HOM05D000081 ORTHO05D000036 9.6e-13 76.6 80 57.5
Manes.02G189600 Manihot esculenta HOM05D000081 ORTHO05D000036 1.3e-12 76.3 80 50.0
Actinidia11544 Actinidia chinensis HOM05D000081 ORTHO05D000036 1.6e-12 75.9 84 52.4
arahy.Tifrunner.gnm1.ann1.XUAL01 Arachis hypogaea HOM05D000081 ORTHO05D000036 1.6e-12 75.9 70 61.4
Potri.016G128300 Populus trichocarpa HOM05D000081 ORTHO05D000036 2.8e-12 75.1 78 48.7
CAN.G474.19 Capsicum annuum HOM05D000081 ORTHO05D000036 4.8e-12 74.3 68 55.9
Solyc09g014990.4 Solanum lycopersicum HOM05D000081 ORTHO05D000036 4.8e-12 74.3 59 59.3
Sopen09g007970 Solanum pennellii HOM05D000081 ORTHO05D000036 4.8e-12 74.3 59 59.3
TWI75G0759 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 4.8e-12 74.3 83 55.4
vmacro20332 Vaccinium macrocarpon HOM05D000081 ORTHO05D000036 4.8e-12 74.3 80 53.8
PGSC0003DMG400016769 Solanum tuberosum HOM05D000081 ORTHO05D000036 6.2e-12 73.9 68 54.4
Potri.013G153400 Populus trichocarpa HOM05D000081 ORTHO05D000036 8.2e-12 73.6 68 58.8
Ciclev10011386m.g Citrus clementina HOM05D000081 ORTHO05D000036 1.1e-11 73.2 82 51.2
Peaxi162Scf00055g01910 Petunia axillaris HOM05D000081 ORTHO05D000036 1.8e-11 72.4 64 56.2
LjContig00141g0010432 Lotus japonicus HOM05D000081 ORTHO05D000036 5.3e-11 70.9 85 54.1
Sed0025056 Sechium edule HOM05D000081 ORTHO05D000036 5.3e-11 70.9 81 48.1
Actinidia29064 Actinidia chinensis HOM05D000081 ORTHO05D000036 9.0e-11 70.1 79 50.6
Duzib093G1729 Durio zibethinus HOM05D000081 ORTHO05D000036 1.2e-10 69.7 74 50.0
Hma1.2p1_1421F.1_g282400 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 1.2e-10 69.7 69 56.5
Cpa.g.sc5.248 Carica papaya HOM05D000081 ORTHO05D000036 1.5e-10 69.3 82 48.8
ECA247G2169 Erigeron canadensis HOM05D000081 ORTHO05D000036 1.5e-10 69.3 74 51.4
Oeu050023.1 Olea europaea HOM05D000081 ORTHO05D000036 1.5e-10 69.3 70 55.7
PSO017G2060 Papaver somniferum HOM05D000081 ORTHO05D000036 1.5e-10 69.3 80 48.8
PGR102G1030 Punica granatum HOM05D000081 ORTHO05D000036 1.5e-10 69.3 79 54.4
ClCG03G000130 Citrullus lanatus HOM05D000081 ORTHO05D000036 2.6e-10 68.6 87 46.0
Potri.019G123500 Populus trichocarpa HOM05D000081 ORTHO05D000036 2.6e-10 68.6 64 56.2
MELO3C020489.2 Cucumis melo HOM05D000081 ORTHO05D000036 4.5e-10 67.8 82 46.3
TWI79G0074 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 7.6e-10 67.0 83 50.6
CsaV3_1G004720 Cucumis sativus L. HOM05D000081 ORTHO05D000036 1.0e-09 66.6 82 46.3
Oeu038715.1 Olea europaea HOM05D000081 ORTHO05D000036 1.3e-09 66.2 68 47.1
Sabra13G0123400 Salix brachista HOM05D000081 ORTHO05D000036 1.3e-09 66.2 72 51.4
SalBow4G2732 Salvia bowleyana HOM05D000081 ORTHO05D000036 1.3e-09 66.2 63 54.0
Nitab4.5_0000684g0170 Nicotiana tabacum HOM05D000081 ORTHO05D000036 1.7e-09 65.9 74 52.7
Ca_05677_v3 Cicer arietinum L. HOM05D000081 ORTHO05D000036 2.2e-09 65.5 89 41.6
Dinv28701 Davidia involucrata HOM05D000081 ORTHO05D000036 2.2e-09 65.5 59 64.4
Nitab4.5_0000046g0020 Nicotiana tabacum HOM05D000081 ORTHO05D000036 2.2e-09 65.5 58 58.6
Sabra19G0122100 Salix brachista HOM05D000081 ORTHO05D000036 6.5e-09 63.9 70 55.7
Sabra19G0132200 Salix brachista HOM05D000081 ORTHO05D000036 6.5e-09 63.9 70 55.7
CAN.G1063.1 Capsicum annuum HOM05D000081 ORTHO05D000036 8.4e-09 63.5 80 45.0
DCAR_028893 Daucus carota HOM05D000081 ORTHO05D000036 1.1e-08 63.2 80 42.5
Nitab4.5_0001226g0020 Nicotiana tabacum HOM05D000081 ORTHO05D000036 1.1e-08 63.2 75 42.7
MSTRG.18969 Avicennia marina HOM05D000081 ORTHO05D000036 1.4e-08 62.8 62 50.0
Oeu032480.1 Olea europaea HOM05D000081 ORTHO05D000036 1.9e-08 62.4 64 51.6
Peaxi162Scf00744g00220 Petunia axillaris HOM05D000081 ORTHO05D000036 1.9e-08 62.4 61 52.5
Lsat_1_v5_gn_9_14580 Lactuca sativa HOM05D000081 ORTHO05D000036 2.5e-08 62.0 62 51.6
Nitab4.5_0000047g0140 Nicotiana tabacum HOM05D000081 ORTHO05D000036 2.5e-08 62.0 75 41.3
PSO349G0294 Papaver somniferum HOM05D000081 ORTHO05D000036 2.5e-08 62.0 69 50.7
Oeu057643.2 Olea europaea HOM05D000081 ORTHO05D000036 3.2e-08 61.6 63 46.0
VMungo0540G0460 Vigna mungo HOM05D000081 ORTHO05D000036 4.2e-08 61.2 74 48.6
Medtr5g074400 Medicago truncatula HOM05D000081 ORTHO05D000036 5.5e-08 60.8 85 43.5
Glyma.18G056600 Glycine max HOM05D000081 ORTHO05D000036 2.7e-07 58.5 89 47.2
Sc20g0006740 Simmondsia chinensis HOM05D000081 ORTHO05D000036 2.7e-07 58.5 81 45.7
Glyma.09G280200 Glycine max HOM05D000081 ORTHO05D000036 3.5e-07 58.2 76 35.5
Glyma.11G163300 Glycine max HOM05D000081 ORTHO05D000036 3.5e-07 58.2 77 49.4
HanXRQChr08g0228641 Helianthus annuus HOM05D000081 ORTHO05D000036 3.5e-07 58.2 60 46.7
Cfa017103 Carpinus fangiana HOM05D000081 ORTHO05D000036 4.6e-07 57.8 71 47.9
arahy.Tifrunner.gnm1.ann1.A8EX91 Arachis hypogaea HOM05D000081 ORTHO05D000036 6.1e-07 57.4 69 42.0
arahy.Tifrunner.gnm1.ann1.EJ82H8 Arachis hypogaea HOM05D000081 ORTHO05D000036 6.1e-07 57.4 69 42.0
arahy.Tifrunner.gnm1.ann1.TUK55Y Arachis hypogaea HOM05D000081 ORTHO05D000036 6.1e-07 57.4 69 42.0
arahy.Tifrunner.gnm1.ann1.W73X2G Arachis hypogaea HOM05D000081 ORTHO05D000036 6.1e-07 57.4 69 42.0
Eucgr.K02940 Eucalyptus grandis HOM05D000081 ORTHO05D000036 1.3e-06 56.2 78 41.0
Lalb_Chr15g0083321 Lupinus albus HOM05D000081 ORTHO05D000036 2.3e-06 55.5 60 53.3
Cc00_g13890 Coffea canephora HOM05D000081 ORTHO05D000036 3.0e-06 55.1 80 43.8
Phvul.006G074600 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 3.0e-06 55.1 83 45.8
AUR62026343 Chenopodium quinoa HOM05D000081 ORTHO05D000036 3.9e-06 54.7 69 46.4
Atru.chr8.2350 Acer truncatum HOM05D000081 ORTHO05D000036 5.1e-06 54.3 84 46.4
arahy.Tifrunner.gnm1.ann1.IBCJ8E Arachis hypogaea HOM05D000081 ORTHO05D000036 5.1e-06 54.3 66 40.9
Glyma.18G208800 Glycine max HOM05D000081 ORTHO05D000036 5.1e-06 54.3 76 32.9
Hund03803 Selenicereus undatus HOM05D000081 ORTHO05D000036 5.1e-06 54.3 57 52.6


User provided reference genes

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