Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.1e-44 183.0 93 100.0
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.1e-36 154.5 90 87.8
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.9e-34 147.9 90 80.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.5e-33 145.2 92 81.5
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.3e-31 138.7 91 78.0
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.3e-31 138.7 91 75.8
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 6.8e-31 137.1 91 76.9
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 1.2e-30 136.3 91 80.2
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.5e-30 136.0 91 80.2
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.5e-30 136.0 90 73.3
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 5.8e-30 134.0 92 76.1
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 7.5e-30 133.7 89 74.2
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.3e-29 132.9 90 76.7
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 4.9e-29 131.0 91 71.4
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.1e-28 129.8 86 73.3
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.1e-28 129.8 87 78.2
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.4e-28 129.4 92 75.0
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.9e-28 129.0 91 71.4
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 2.4e-28 128.6 91 70.3
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 4.1e-28 127.9 92 72.8
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 9.2e-28 126.7 90 71.1
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 9.2e-28 126.7 86 74.4
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 2.1e-27 125.6 87 72.4
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 4.6e-27 124.4 90 72.2
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 6.0e-27 124.0 91 68.1
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.3e-26 122.9 90 73.3
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.3e-26 122.9 93 69.9
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.3e-26 122.9 91 67.0
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 3.9e-26 121.3 90 71.1
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 3.9e-26 121.3 90 71.1
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 5.1e-26 120.9 89 69.7
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 5.1e-26 120.9 91 65.9
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 5.1e-26 120.9 90 67.8
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 6.6e-26 120.6 90 71.1
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 6.6e-26 120.6 91 71.4
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 6.6e-26 120.6 90 70.0
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 1.1e-25 119.8 90 67.8
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.9e-25 119.0 89 68.5
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 2.5e-25 118.6 90 65.6
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.5e-25 118.6 89 68.5
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.3e-25 118.2 91 70.3
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 3.3e-25 118.2 88 69.3
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.3e-25 118.2 90 66.7
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.3e-25 118.2 90 66.7
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 7.3e-25 117.1 95 69.5
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 9.5e-25 116.7 90 66.7
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 9.5e-25 116.7 85 65.9
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.8e-24 115.2 90 64.4
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 2.8e-24 115.2 91 68.1
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 3.6e-24 114.8 90 64.4
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 3.6e-24 114.8 90 64.4
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.6e-24 114.8 90 64.4
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 4.7e-24 114.4 90 66.7
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 4.7e-24 114.4 90 65.6
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 6.2e-24 114.0 90 66.7
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 6.2e-24 114.0 88 67.0
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.1e-23 113.2 90 64.4
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.1e-23 113.2 90 64.4
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 1.4e-23 112.8 90 64.4
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 1.4e-23 112.8 90 64.4
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 1.4e-23 112.8 90 64.4
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.3e-23 112.1 90 64.4
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.3e-23 112.1 90 63.3
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.3e-23 112.1 90 63.3
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 3.1e-23 111.7 86 66.3
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.1e-23 111.7 90 63.3
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 3.1e-23 111.7 89 68.5
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.2e-22 109.8 88 64.8
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.5e-22 109.4 91 60.4
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 2.0e-22 109.0 90 61.1
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 2.0e-22 109.0 90 63.3
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.6e-22 108.6 88 65.9
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 3.4e-22 108.2 90 62.2
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 3.4e-22 108.2 115 53.0
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 3.4e-22 108.2 61 77.0
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 7.6e-22 107.1 90 61.1
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 7.6e-22 107.1 66 74.2
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 9.9e-22 106.7 90 62.2
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 9.9e-22 106.7 90 63.3
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 9.9e-22 106.7 90 63.3
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.3e-21 106.3 86 67.4
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.7e-21 105.9 88 62.5
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.7e-21 105.9 89 62.9
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 2.9e-21 105.1 56 82.1
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 3.7e-21 104.8 85 62.4
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 3.7e-21 104.8 90 58.9
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 6.4e-21 104.0 85 63.5
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.4e-20 102.8 92 59.8
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.9e-20 102.4 83 62.7
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 3.2e-20 101.7 93 62.4
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.2e-19 99.8 78 65.4
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.6e-19 99.4 86 62.8
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 2.7e-19 98.6 90 60.0
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.6e-19 97.8 78 66.7
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 6.0e-19 97.4 90 58.9
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.3e-18 96.3 92 59.8
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 1.3e-18 96.3 73 65.8
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 1.7e-18 95.9 80 62.5
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.7e-18 95.9 92 59.8
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 2.3e-18 95.5 55 74.5
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.3e-18 95.5 92 59.8
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 3.0e-18 95.1 90 63.3
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.9e-18 94.7 92 58.7
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 6.6e-18 94.0 91 59.3
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.5e-17 92.8 87 57.5
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.5e-17 92.8 87 57.5
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.5e-17 92.8 92 58.7
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 3.3e-17 91.7 57 73.7
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 3.3e-17 91.7 85 58.8
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.3e-17 91.3 86 59.3
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 5.6e-17 90.9 82 63.4
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 5.6e-17 90.9 92 55.4
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.2e-16 89.7 91 56.0
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.1e-15 86.7 92 55.4
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 1.4e-15 86.3 78 62.8
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 3.1e-15 85.1 84 60.7
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 1.5e-14 82.8 78 60.3
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.0e-14 82.4 90 52.2
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 2.0e-14 82.4 91 51.6
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 3.4e-14 81.6 86 53.5
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 9.9e-14 80.1 88 51.1
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 9.9e-14 80.1 87 55.2
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.3e-13 79.7 55 67.3
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.2e-12 74.7 72 55.6
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 3.5e-11 71.6 46 67.4
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 3.3e-09 65.1 55 56.4
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 1.6e-08 62.8 31 87.1
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 8.1e-08 60.5 28 89.3
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.5e-06 56.2 26 92.3
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.5e-06 56.2 67 52.2
Nn6g34798 Nelumbo nucifera HOM05D005659 ORTHO05D007059 7.6e-06 53.9 26 76.9


User provided reference genes

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