Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 7.4e-169 597.8 486 100.0
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 5.4e-103 379.0 307 78.2
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 2.3e-98 363.6 276 75.4
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 2.3e-98 363.6 276 75.4
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 2.3e-98 363.6 276 75.4
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 3.1e-98 363.2 281 72.2
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 5.2e-98 362.5 274 75.9
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.4e-97 359.8 281 71.5
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.4e-97 359.8 229 79.0
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 4.1e-95 352.8 283 76.7
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 3.0e-93 346.7 281 75.1
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 1.1e-92 344.7 379 59.4
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 2.5e-92 343.6 231 75.8
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 5.6e-92 342.4 224 77.2
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 7.3e-92 342.0 231 73.2
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 8.9e-90 335.1 283 70.3
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 2.0e-89 334.0 199 80.4
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 2.6e-89 333.6 287 67.6
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 2.9e-88 330.1 228 76.8
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 4.9e-88 329.3 295 69.2
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 4.1e-87 326.2 287 66.6
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 7.1e-87 325.5 225 70.2
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 9.2e-87 325.1 270 67.8
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 2.1e-86 323.9 259 72.2
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 3.5e-86 323.2 229 70.3
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.6e-86 322.8 174 86.2
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 6.0e-86 322.4 279 67.7
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 1.3e-85 321.2 227 71.8
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 1.3e-85 321.2 222 71.6
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 3.9e-85 319.7 280 66.4
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 5.1e-85 319.3 230 71.3
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 5.1e-85 319.3 230 71.3
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 6.6e-85 318.9 289 67.5
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.1e-84 318.2 288 64.2
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 1.5e-84 317.8 282 67.0
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 2.5e-84 317.0 228 71.1
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.5e-84 317.0 168 86.9
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.5e-84 317.0 168 86.9
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.3e-84 316.6 280 65.0
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 7.3e-84 315.5 172 84.9
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 7.3e-84 315.5 172 84.9
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 7.3e-84 315.5 271 67.2
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 9.5e-84 315.1 227 76.7
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 9.5e-84 315.1 221 69.2
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 4.7e-83 312.8 264 62.1
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 6.2e-83 312.4 174 85.1
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 6.2e-83 312.4 281 64.4
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 8.1e-83 312.0 228 69.3
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 1.4e-82 311.2 208 74.5
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 2.0e-81 307.4 172 83.7
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 2.6e-81 307.0 241 64.7
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 5.8e-81 305.8 172 83.1
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 1.9e-79 300.8 275 64.0
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.4e-79 300.4 288 67.4
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 3.2e-79 300.1 172 83.1
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 3.5e-78 296.6 231 69.7
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 2.3e-77 293.9 239 64.4
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 6.6e-77 292.4 168 83.3
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 3.3e-76 290.0 281 59.1
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 1.2e-75 288.1 174 79.9
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 2.1e-75 287.3 224 66.1
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 8.1e-75 285.4 230 63.9
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.4e-74 284.6 238 61.8
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 1.8e-74 284.3 172 76.7
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 2.4e-74 283.9 263 63.5
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 9.0e-74 282.0 219 64.8
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 9.0e-74 282.0 227 62.1
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.5e-73 281.2 228 62.7
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 3.4e-73 280.0 226 64.6
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 1.7e-72 277.7 230 60.4
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 2.9e-72 276.9 172 74.4
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 4.9e-72 276.2 278 59.0
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 1.1e-71 275.0 225 59.1
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.2e-70 271.6 285 56.1
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 1.6e-70 271.2 226 58.4
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.6e-70 271.2 173 73.4
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 4.6e-70 269.6 173 71.7
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 1.0e-69 268.5 233 60.1
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 3.0e-69 266.9 288 54.5
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 5.1e-69 266.2 226 57.5
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 3.3e-68 263.5 176 69.9
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 1.4e-66 258.1 287 55.1
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 5.8e-65 252.7 140 80.7
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 8.4e-64 248.8 285 53.0
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.1e-60 238.4 285 49.8
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 3.7e-59 233.4 286 54.2
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 8.1e-59 232.3 224 51.3
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 3.4e-49 200.3 279 42.3
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.2e-47 193.7 101 87.1
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 1.6e-46 191.4 103 78.6
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 2.1e-46 191.0 238 45.4
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 2.2e-43 181.0 173 57.2
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 4.2e-39 166.8 182 51.6
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 9.7e-36 155.6 274 40.1
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 3.7e-35 153.7 227 42.3
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 8.2e-35 152.5 133 56.4
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 8.2e-35 152.5 299 36.1
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 1.5e-33 148.3 242 45.9
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.7e-32 144.8 77 83.1
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.7e-32 144.8 77 83.1
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 8.8e-21 105.9 55 85.5
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 4.5e-17 93.6 199 44.7
CBR_g34581 Chara braunii HOM05D005457 ORTHO05D006350 3.8e-16 90.5 131 34.4
CBR_g29779 Chara braunii HOM05D005457 ORTHO05D006350 9.4e-15 85.9 175 30.3
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 2.1e-14 84.7 115 33.0
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 2.1e-14 84.7 161 37.9
CBR_g44392 Chara braunii HOM05D005457 ORTHO05D006350 2.7e-14 84.3 114 35.1
CBR_g49555 Chara braunii HOM05D005457 ORTHO05D006350 6.1e-14 83.2 151 27.2
CBR_g34583 Chara braunii HOM05D005457 ORTHO05D006350 1.0e-13 82.4 114 33.3
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 4.4e-12 77.0 225 33.3
Nn2g14614 Nelumbo nucifera HOM05D005457 ORTHO05D006350 2.2e-08 64.7 92 43.5
PGSC0003DMG400009632 Solanum tuberosum HOM05D005457 ORTHO05D006350 1.5e-07 62.0 43 62.8


User provided reference genes

Program Settings