Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.0e-135 486.9 264 100.0
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 3.1e-121 438.7 265 89.1
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 9.0e-121 437.2 265 87.5
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.2e-120 436.8 265 87.9
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 3.4e-120 435.3 264 86.7
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.0e-119 433.7 265 86.4
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 2.2e-119 432.6 265 87.2
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.2e-119 432.6 265 86.8
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.9e-119 432.2 265 86.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 3.8e-119 431.8 265 86.8
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 5.0e-119 431.4 264 86.0
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 8.5e-119 430.6 264 86.0
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 8.5e-119 430.6 260 87.7
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 8.5e-119 430.6 265 87.9
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.9e-118 429.5 265 85.3
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 2.5e-118 429.1 265 87.2
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.9
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 84.5
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 9.4e-118 427.2 265 84.9
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 9.4e-118 427.2 265 85.7
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.2e-117 426.8 264 87.1
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.6e-117 426.4 278 84.2
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.6e-117 426.4 265 85.3
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 2.1e-117 426.0 265 85.7
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 2.1e-117 426.0 265 87.2
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.7e-117 425.6 261 87.7
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.6e-117 424.9 265 85.3
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.6e-117 424.9 265 84.2
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 4.6e-117 424.9 264 85.6
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 4.6e-117 424.9 265 86.4
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 4.6e-117 424.9 265 85.3
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.4e-116 423.3 257 87.5
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.8e-116 422.9 264 84.5
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 84.5
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 8.8e-116 420.6 265 83.8
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 2.0e-115 419.5 265 83.8
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.3e-115 418.7 274 82.1
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 3.3e-115 418.7 265 84.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 4.3e-115 418.3 265 84.5
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 4.3e-115 418.3 264 83.3
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 5.7e-115 417.9 261 85.4
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 7.4e-115 417.5 262 84.0
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 9.7e-115 417.2 265 83.0
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 1.3e-114 416.8 260 84.6
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 2.2e-114 416.0 261 83.1
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.2e-114 416.0 263 85.6
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 83.8
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 3.7e-114 415.2 261 85.1
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.7e-114 415.2 255 85.1
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 4.8e-114 414.8 261 83.5
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.4e-113 413.3 261 83.5
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.4e-113 413.3 264 81.8
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.4e-113 413.3 260 83.8
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.4e-113 413.3 265 83.0
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.4e-113 412.5 265 82.3
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.4e-113 412.5 261 82.8
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 5.3e-113 411.4 261 83.5
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 5.3e-113 411.4 261 83.1
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 6.9e-113 411.0 273 79.5
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 6.9e-113 411.0 264 81.8
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 6.9e-113 411.0 260 82.7
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.2e-112 410.2 273 79.5
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.5e-112 409.8 273 79.5
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 2.0e-112 409.5 261 82.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 3.4e-112 408.7 264 84.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 5.9e-112 407.9 265 81.5
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 5.9e-112 407.9 258 81.8
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 7.7e-112 407.5 253 85.8
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-111 407.1 273 79.1
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.0e-111 407.1 273 79.1
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.0e-111 407.1 264 81.1
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 1.3e-111 406.8 274 78.1
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.3e-111 406.8 263 83.7
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.7e-111 406.4 264 80.7
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.7e-111 406.4 261 82.4
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 2.2e-111 406.0 264 80.3
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 3.8e-111 405.2 261 81.6
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 5.0e-111 404.8 262 80.9
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 6.5e-111 404.4 260 83.5
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 4.2e-110 401.7 267 79.4
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 4.2e-110 401.7 261 81.2
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 9.4e-110 400.6 241 88.8
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 9.4e-110 400.6 261 80.8
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 1.6e-109 399.8 263 80.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 2.7e-109 399.1 263 80.2
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 4.7e-109 398.3 262 79.8
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 6.1e-109 397.9 260 81.5
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 6.1e-109 397.9 260 80.4
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 6.1e-109 397.9 260 80.4
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 6.1e-109 397.9 262 79.8
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 6.1e-109 397.9 253 83.8
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 6.1e-109 397.9 256 82.8
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 7.9e-109 397.5 262 79.4
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 8.8e-108 394.0 260 80.0
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 2.0e-107 392.9 251 82.9
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 9.7e-107 390.6 287 77.4
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 8.2e-106 387.5 259 77.2
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.4e-105 386.7 286 76.2
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 5.3e-105 384.8 262 78.2
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.0e-105 384.4 265 76.6
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.2e-104 383.6 253 79.4
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 7.7e-104 380.9 225 89.3
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 2.5e-102 375.9 225 88.0
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 4.2e-102 375.2 238 84.0
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.2e-102 374.4 259 77.2
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.7e-100 367.9 258 74.0
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.6e-99 365.9 260 72.7
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.2e-98 362.8 264 71.6
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.1e-97 360.5 258 72.9
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.1e-97 357.5 259 69.5
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.5e-96 355.5 256 71.1
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 4.5e-96 355.1 260 75.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 6.8e-92 341.3 258 69.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 5.4e-89 331.6 265 70.9
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 5.5e-86 321.6 212 83.0
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.8e-84 316.6 252 68.3
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 9.5e-70 267.7 160 87.5
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-68 261.2 255 52.9
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.7e-66 256.9 177 75.7
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.4e-65 253.8 265 58.9
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 2.3e-63 246.5 150 86.7
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 9.2e-57 224.6 154 78.6
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.2e-49 199.5 265 51.3
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.1e-48 196.8 235 43.4
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.9e-46 190.3 249 40.6
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.2e-40 171.0 235 41.3
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 3.2e-33 146.4 95 75.8
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.4e-33 145.6 84 88.1
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.7e-32 143.3 77 97.4
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.0e-32 142.1 240 35.0
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-29 134.4 75 93.3
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 2.0e-27 127.1 117 61.5
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.2e-26 123.6 101 73.3
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 5.5e-25 119.0 233 35.2
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 5.0e-10 69.3 51 72.5


User provided reference genes

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