Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1103 Trochodendron aralioides HOM05D005693 ORTHO05D006826 1.1e-127 459.9 232 100.0
Dinv24066 Davidia involucrata HOM05D005693 ORTHO05D006826 4.1e-69 265.4 215 67.0
Aqoxy1G00128 Aquilegia oxysepala HOM05D005693 ORTHO05D006826 8.4e-62 241.1 212 64.6
Lju124A25T35 Lonicera japonica HOM05D005693 ORTHO05D006826 6.9e-56 221.5 218 56.9
GSVIVG01033491001 Vitis vinifera HOM05D005693 ORTHO05D006826 1.2e-55 220.7 195 63.1
Nn7g36005 Nelumbo nucifera HOM05D005693 ORTHO05D006826 2.6e-55 219.5 230 54.8
Manes.09G035800 Manihot esculenta HOM05D005693 ORTHO05D006826 2.9e-54 216.1 207 58.0
TWI53G1089 Tripterygium wilfordii HOM05D005693 ORTHO05D006826 1.1e-53 214.2 205 59.5
Haze_20000 Corylus avellana HOM05D005693 ORTHO05D006826 1.2e-52 210.7 202 58.4
Nitab4.5_0004458g0020 Nicotiana tabacum HOM05D005693 ORTHO05D006826 1.2e-52 210.7 206 56.8
CiPaw.09G046600 Carya illinoinensis HOM05D005693 ORTHO05D006826 4.6e-52 208.8 202 56.4
RcHm_v2.0_Chr3g0479521 Rosa chinensis HOM05D005693 ORTHO05D006826 6.0e-52 208.4 196 60.2
Haze_20002 Corylus avellana HOM05D005693 ORTHO05D006826 1.0e-51 207.6 202 57.9
Nitab4.5_0001137g0070 Nicotiana tabacum HOM05D005693 ORTHO05D006826 2.3e-51 206.5 206 55.8
Sopen03g015940 Solanum pennellii HOM05D005693 ORTHO05D006826 5.1e-51 205.3 205 56.1
Solyc03g063320.3 Solanum lycopersicum HOM05D005693 ORTHO05D006826 8.7e-51 204.5 205 56.1
Cpa.g.sc85.51 Carica papaya HOM05D005693 ORTHO05D006826 2.5e-50 203.0 202 58.4
Prupe.7G077600 Prunus persica HOM05D005693 ORTHO05D006826 2.5e-50 203.0 195 59.0
CSS0003318 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 3.6e-49 199.1 210 56.2
CSS0050183 Camellia sinensis var. sinensis HOM05D005693 ORTHO05D006826 3.6e-49 199.1 210 56.2
MD14G1055100 Malus domestica HOM05D005693 ORTHO05D006826 2.4e-48 196.4 197 56.9
DCAR_013542 Daucus carota HOM05D005693 ORTHO05D006826 4.0e-48 195.7 221 55.2
PGSC0003DMG400014975 Solanum tuberosum HOM05D005693 ORTHO05D006826 6.9e-48 194.9 183 59.6
COL.COLO4_33976 Corchorus olitorius HOM05D005693 ORTHO05D006826 1.5e-47 193.7 209 56.9
PSO339G5051 Papaver somniferum HOM05D005693 ORTHO05D006826 2.0e-47 193.4 209 56.9
Ah.13g075810 Amaranthus hybridus HOM05D005693 ORTHO05D006826 3.4e-47 192.6 208 55.8
MD12G1056600 Malus domestica HOM05D005693 ORTHO05D006826 9.9e-47 191.0 197 55.8
Duzib128G0858 Durio zibethinus HOM05D005693 ORTHO05D006826 1.3e-46 190.7 209 55.0
vmacro07901 Vaccinium macrocarpon HOM05D005693 ORTHO05D006826 1.3e-46 190.7 232 52.2
Hund24794 Selenicereus undatus HOM05D005693 ORTHO05D006826 2.2e-46 189.9 233 50.6
Thecc.05G172100 Theobroma cacao HOM05D005693 ORTHO05D006826 2.2e-46 189.9 208 54.8
Lsat_1_v5_gn_8_75420 Lactuca sativa HOM05D005693 ORTHO05D006826 2.9e-46 189.5 239 51.0
Actinidia32396 Actinidia chinensis HOM05D005693 ORTHO05D006826 3.8e-46 189.1 230 52.2
ClCG10G017580 Citrullus lanatus HOM05D005693 ORTHO05D006826 3.8e-46 189.1 206 54.4
Potri.016G045200 Populus trichocarpa HOM05D005693 ORTHO05D006826 3.8e-46 189.1 191 58.1
PGR004G1521 Punica granatum HOM05D005693 ORTHO05D006826 3.8e-46 189.1 208 52.9
CANSAT64G1199 Cannabis sativa HOM05D005693 ORTHO05D006826 4.9e-46 188.7 212 55.2
Hma1.2p1_0648F.1_g195113 Hydrangea macrophylla HOM05D005693 ORTHO05D006826 1.1e-45 187.6 187 57.8
CsaV3_3G038750 Cucumis sativus L. HOM05D005693 ORTHO05D006826 2.4e-45 186.4 207 53.1
MELO3C009620.2 Cucumis melo HOM05D005693 ORTHO05D006826 3.2e-45 186.0 212 52.8
AUR62015362 Chenopodium quinoa HOM05D005693 ORTHO05D006826 4.2e-45 185.7 232 49.6
Sabra16G0049200 Salix brachista HOM05D005693 ORTHO05D006826 4.2e-45 185.7 191 56.5
AUR62012025 Chenopodium quinoa HOM05D005693 ORTHO05D006826 9.3e-45 184.5 232 48.7
CAN.G87.1 Capsicum annuum HOM05D005693 ORTHO05D006826 1.2e-44 184.1 208 54.3
Gohir.A01G191200 Gossypium hirsutum HOM05D005693 ORTHO05D006826 7.9e-44 181.4 207 53.6
FvH4_6g22170 Fragaria vesca HOM05D005693 ORTHO05D006826 1.0e-43 181.0 195 54.4
Gorai.002G224200 Gossypium raimondii HOM05D005693 ORTHO05D006826 1.0e-43 181.0 207 54.1
Gohir.D01G178700 Gossypium hirsutum HOM05D005693 ORTHO05D006826 1.5e-42 177.2 207 53.1
EL10Ac3g06910 Beta vulgaris HOM05D005693 ORTHO05D006826 1.3e-41 174.1 209 52.2
HanXRQChr05g0132951 Helianthus annuus HOM05D005693 ORTHO05D006826 1.3e-41 174.1 237 49.8
FAN27G0418 Fragaria x ananassa HOM05D005693 ORTHO05D006826 1.6e-41 173.7 173 57.2
Atru.chr8.1120 Acer truncatum HOM05D005693 ORTHO05D006826 4.8e-41 172.2 187 55.1
arahy.Tifrunner.gnm1.ann1.C1QR5S Arachis hypogaea HOM05D005693 ORTHO05D006826 1.1e-40 171.0 189 55.6
arahy.Tifrunner.gnm1.ann1.F8DN54 Arachis hypogaea HOM05D005693 ORTHO05D006826 1.1e-40 171.0 189 55.6
Sed0000696 Sechium edule HOM05D005693 ORTHO05D006826 3.1e-40 169.5 195 52.3
Sc19g0006040 Simmondsia chinensis HOM05D005693 ORTHO05D006826 3.1e-40 169.5 195 51.3
Medtr7g093290 Medicago truncatula HOM05D005693 ORTHO05D006826 4.0e-40 169.1 190 55.8
Psat3g068360 Pisum sativum HOM05D005693 ORTHO05D006826 6.9e-40 168.3 199 54.8
Cc06_g15820 Coffea canephora HOM05D005693 ORTHO05D006826 1.2e-39 167.5 232 46.6
TPR.G18210 Trifolium pratense HOM05D005693 ORTHO05D006826 1.5e-39 167.2 189 55.6
Eucgr.A02454 Eucalyptus grandis HOM05D005693 ORTHO05D006826 2.6e-39 166.4 189 54.5
THA.LOC104799293 Tarenaya hassleriana HOM05D005693 ORTHO05D006826 3.4e-39 166.0 210 49.0
Migut.J01840 Erythranthe guttata HOM05D005693 ORTHO05D006826 5.8e-39 165.2 219 48.9
Sp3g10330 Schrenkiella parvula HOM05D005693 ORTHO05D006826 2.9e-38 162.9 206 50.5
Lj1g0019099 Lotus japonicus HOM05D005693 ORTHO05D006826 3.8e-38 162.5 190 52.6
CDE05G1621 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 4.9e-38 162.2 188 53.2
BraA05t22521Z Brassica rapa HOM05D005693 ORTHO05D006826 8.4e-38 161.4 190 52.1
A05p37250 Brassica napus HOM05D005693 ORTHO05D006826 1.1e-37 161.0 189 51.9
BcaC05g29290 Brassica carinata HOM05D005693 ORTHO05D006826 2.4e-37 159.8 189 51.9
BolC5t34239H Brassica oleracea HOM05D005693 ORTHO05D006826 2.4e-37 159.8 189 51.9
Aa31LG3G6280 Aethionema arabicum HOM05D005693 ORTHO05D006826 7.1e-37 158.3 183 51.4
AT3G12100 Arabidopsis thaliana HOM05D005693 ORTHO05D006826 7.1e-37 158.3 189 51.9
BcaB06g25545 Brassica carinata HOM05D005693 ORTHO05D006826 7.1e-37 158.3 209 48.8
CARHR086660 Cardamine hirsuta HOM05D005693 ORTHO05D006826 9.3e-37 157.9 183 50.8
Thhalv10020889m.g Eutrema salsugineum HOM05D005693 ORTHO05D006826 9.3e-37 157.9 188 51.1
AL3G23730 Arabidopsis lyrata HOM05D005693 ORTHO05D006826 1.6e-36 157.1 189 51.3
C05p55720 Brassica napus HOM05D005693 ORTHO05D006826 2.7e-36 156.4 191 51.8
Carub.0003s1144 Capsella rubella HOM05D005693 ORTHO05D006826 3.5e-36 156.0 188 49.5
MSTRG.6485 Avicennia marina HOM05D005693 ORTHO05D006826 4.6e-36 155.6 220 46.8
Ciclev10011987m.g Citrus clementina HOM05D005693 ORTHO05D006826 1.8e-35 153.7 208 49.0
Lalb_Chr18g0047901 Lupinus albus HOM05D005693 ORTHO05D006826 6.7e-35 151.8 186 53.8
Peaxi162Scf00258g00724 Petunia axillaris HOM05D005693 ORTHO05D006826 1.5e-34 150.6 211 50.2
HPP92_009025 Vanilla planifolia HOM05D005693 ORTHO05D006826 1.3e-33 147.5 183 47.0
HPP92_009079 Vanilla planifolia HOM05D005693 ORTHO05D006826 1.3e-33 147.5 183 47.0
ATR0807G195 Amborella trichopoda HOM05D005693 ORTHO05D006826 8.2e-33 144.8 221 46.2
FAN25G3535 Fragaria x ananassa HOM05D011417 ORTHO05D006826 1.1e-32 144.4 193 47.7
Oeu063873.1 Olea europaea HOM05D005693 ORTHO05D006826 1.1e-32 144.4 221 47.5
VMungo1383G3018 Vigna mungo HOM05D005693 ORTHO05D006826 6.9e-32 141.7 173 53.8
Glyma.03G145200 Glycine max HOM05D005693 ORTHO05D006826 9.0e-32 141.4 199 49.2
Phvul.001G142750 Phaseolus vulgaris HOM05D005693 ORTHO05D006826 2.0e-31 140.2 197 50.3
Glyma.19G148200 Glycine max HOM05D005693 ORTHO05D006826 3.4e-31 139.4 191 50.3
SalBow6G0162 Salvia bowleyana HOM05D005693 ORTHO05D006826 7.6e-31 138.3 210 45.2
PSO384G0754 Papaver somniferum HOM05D005693 ORTHO05D006826 4.9e-30 135.6 103 68.0
Manes.11G017601 Manihot esculenta HOM05D005693 ORTHO05D006826 1.4e-29 134.0 103 68.0
Manes.17G026624 Manihot esculenta HOM05D005693 ORTHO05D006826 1.4e-29 134.0 103 68.0
Ca_08527_v3 Cicer arietinum L. HOM05D005693 ORTHO05D006826 1.2e-28 131.0 190 47.9
SEGI_14579 Sequoiadendron giganteum HOM05D005693 ORTHO05D006826 1.3e-27 127.5 206 42.2
RcHm_v2.0_Chr2g0145321 Rosa chinensis HOM05D005693 ORTHO05D006826 5.7e-26 122.1 73 83.6
ECA236G1678 Erigeron canadensis HOM05D005693 ORTHO05D006826 1.2e-23 114.4 94 60.6
SGA_v2.0_scaffold69G23060 Striga asiatica HOM05D005693 ORTHO05D006826 2.6e-23 113.2 216 38.0
Atru.chr5.2645 Acer truncatum HOM05D005693 ORTHO05D006826 8.5e-22 108.2 163 45.4
Atru.chr9.1297 Acer truncatum HOM05D005693 ORTHO05D006826 8.5e-22 108.2 163 45.4
Zm00001eb190540 Zea mays HOM05D005693 ORTHO05D006826 1.1e-21 107.8 201 40.3
CDE05G0078 Ceratophyllum demersum HOM05D005693 ORTHO05D006826 1.4e-21 107.5 134 52.2
Duzib093G0150 Durio zibethinus HOM05D005693 ORTHO05D006826 2.5e-21 106.7 160 45.6
QL07p023907 Quercus lobata HOM05D005693 ORTHO05D006826 2.5e-21 106.7 150 48.7
QL93p0118_0004 Quercus lobata HOM05D005693 ORTHO05D006826 1.2e-20 104.4 150 48.0
SMO196G0199 Selaginella moellendorffii HOM05D005693 ORTHO05D006826 1.4e-19 100.9 74 66.2
Pp3c19_16310 Physcomitrium patens HOM05D005693 ORTHO05D006826 1.5e-18 97.4 114 47.4
unitig_744.g24644 Utricularia gibba HOM05D001741 ORTHO05D002196 4.3e-18 95.9 121 45.5
Mapoly0031s0152 Marchantia polymorpha HOM05D005693 ORTHO05D006826 4.8e-17 92.4 183 37.2
AagrBONN_evm.TU.Sc2ySwM_368.2514 Anthoceros agrestis HOM05D005693 ORTHO05D006826 1.4e-16 90.9 141 38.3
HanXRQChr08g0219081 Helianthus annuus HOM05D005693 ORTHO05D006826 1.8e-16 90.5 77 62.3
Lsat_1_v5_gn_8_18181 Lactuca sativa HOM05D005693 ORTHO05D006826 9.1e-16 88.2 60 76.7
CBR_g23093 Chara braunii HOM05D005693 ORTHO05D006826 5.9e-15 85.5 99 48.5
QL93p0118_0012 Quercus lobata HOM05D005693 ORTHO05D006826 1.4e-13 80.9 64 65.6
QL07p023915 Quercus lobata HOM05D005693 ORTHO05D006826 1.9e-13 80.5 65 63.1
Glyma.14G019600 Glycine max HOM05D005693 ORTHO05D006826 5.5e-13 79.0 58 70.7
DCAR_021948 Daucus carota HOM05D000058 ORTHO05D000255 2.3e-11 73.6 102 46.1
arahy.Tifrunner.gnm1.ann1.WY0JR2 Arachis hypogaea HOM05D005693 ORTHO05D015958 1.1e-10 71.2 41 82.9


User provided reference genes

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