Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1037 Trochodendron aralioides HOM05D000082 ORTHO05D009107 1.2e-112 409.8 212 100.0
Aqoxy2G01925 Aquilegia oxysepala HOM05D000082 ORTHO05D009107 4.8e-32 142.1 131 59.5
Dinv37235 Davidia involucrata HOM05D000082 ORTHO05D009107 1.2e-30 137.5 129 58.9
Lj5g0019657 Lotus japonicus HOM05D000082 ORTHO05D009107 2.0e-30 136.7 133 58.6
Cfa017471 Carpinus fangiana HOM05D000082 ORTHO05D009107 2.7e-30 136.3 126 61.1
Haze_20683 Corylus avellana HOM05D000082 ORTHO05D009107 4.5e-30 135.6 126 60.3
Glyma.10G047200 Glycine max HOM05D000082 ORTHO05D009107 7.7e-30 134.8 134 59.0
Phvul.007G161400 Phaseolus vulgaris HOM05D000082 ORTHO05D009107 1.3e-29 134.0 129 60.5
Peaxi162Scf00472g00824 Petunia axillaris HOM05D000082 ORTHO05D009107 3.8e-29 132.5 140 55.7
Glyma.13G135100 Glycine max HOM05D000082 ORTHO05D009107 5.0e-29 132.1 134 59.0
VMungo0720G0005 Vigna mungo HOM05D000082 ORTHO05D009107 5.0e-29 132.1 130 60.0
PSO339G6187 Papaver somniferum HOM05D000082 ORTHO05D009107 6.5e-29 131.7 140 58.6
QL07p045866 Quercus lobata HOM05D000082 ORTHO05D009107 4.2e-28 129.0 132 56.1
PSO384G2695 Papaver somniferum HOM05D000082 ORTHO05D009107 7.2e-28 128.3 140 57.1
Nitab4.5_0000643g0220 Nicotiana tabacum HOM05D000082 ORTHO05D009107 3.6e-27 125.9 140 54.3
Lsat_1_v5_gn_6_32220 Lactuca sativa HOM05D000082 ORTHO05D009107 1.0e-26 124.4 143 54.5
Nitab4.5_0000202g0330 Nicotiana tabacum HOM05D000082 ORTHO05D009107 4.0e-26 122.5 140 52.1
Sopen09g001920 Solanum pennellii HOM05D000082 ORTHO05D009107 5.2e-26 122.1 129 51.9
DCAR_000454 Daucus carota HOM05D000082 ORTHO05D009107 6.8e-26 121.7 127 55.1
DCAR_014952 Daucus carota HOM05D000082 ORTHO05D009107 6.8e-26 121.7 127 55.1
Peaxi162Scf00597g00828 Petunia axillaris HOM05D000082 ORTHO05D009107 8.8e-26 121.3 138 50.0
Solyc09g007060.2 Solanum lycopersicum HOM05D000082 ORTHO05D009107 8.8e-26 121.3 138 51.4
Cc06_g03320 Coffea canephora HOM05D000082 ORTHO05D009107 3.4e-25 119.4 145 49.7
Psat6g069240 Pisum sativum HOM05D000082 ORTHO05D009107 5.7e-25 118.6 139 51.1
RhsimUnG0121000 Rhododendron simsii HOM05D000082 ORTHO05D009107 5.7e-25 118.6 132 51.5
Duzib106G0946 Durio zibethinus HOM05D000082 ORTHO05D009107 9.8e-25 117.9 139 54.0
Medtr1g067260 Medicago truncatula HOM05D000082 ORTHO05D009107 1.7e-24 117.1 136 51.5
Ah.16g101190 Amaranthus hybridus HOM05D000082 ORTHO05D009107 2.8e-24 116.3 128 52.3
DCAR_017743 Daucus carota HOM05D000082 ORTHO05D009107 6.3e-24 115.2 128 52.3
CSS0002434 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D009107 1.4e-23 114.0 139 53.2
Nitab4.5_0007103g0010 Nicotiana tabacum HOM05D000082 ORTHO05D009107 5.4e-23 112.1 140 49.3
MSTRG.10289 Avicennia marina HOM05D000082 ORTHO05D009107 7.0e-23 111.7 134 50.0
Hma1.2p1_0111F.1_g053540 Hydrangea macrophylla HOM05D000082 ORTHO05D009107 7.0e-23 111.7 140 49.3
Migut.L01646 Erythranthe guttata HOM05D000082 ORTHO05D009107 1.2e-22 110.9 141 51.1
PGSC0003DMG400011052 Solanum tuberosum HOM05D000082 ORTHO05D009107 1.6e-22 110.5 143 50.3
Gohir.A04G077700 Gossypium hirsutum HOM05D000082 ORTHO05D009107 2.7e-22 109.8 139 52.5
Nitab4.5_0015651g0010 Nicotiana tabacum HOM05D000082 ORTHO05D009107 4.5e-22 109.0 123 52.8
CiPaw.09G185100 Carya illinoinensis HOM05D000082 ORTHO05D009107 5.9e-22 108.6 149 46.3
MD04G1110800 Malus domestica HOM05D000082 ORTHO05D009107 1.3e-21 107.5 135 48.9
Sc20g0004250 Simmondsia chinensis HOM05D000082 ORTHO05D009107 1.3e-21 107.5 138 47.8
Thecc.05G050400 Theobroma cacao HOM05D000082 ORTHO05D009107 1.3e-21 107.5 139 51.1
Lalb_Chr02g0153441 Lupinus albus HOM05D000082 ORTHO05D009107 2.9e-21 106.3 127 49.6
Gorai.009G421800 Gossypium raimondii HOM05D000082 ORTHO05D009107 3.8e-21 105.9 139 51.1
FAN09G0908 Fragaria x ananassa HOM05D000082 ORTHO05D009107 6.5e-21 105.1 134 44.0
Sabra16G0090300 Salix brachista HOM05D000082 ORTHO05D009107 6.5e-21 105.1 130 48.5
MELO3C009295.2 Cucumis melo HOM05D000082 ORTHO05D009107 1.5e-20 104.0 142 44.4
ECA233G4487 Erigeron canadensis HOM05D000082 ORTHO05D009107 1.5e-20 104.0 131 48.9
Gohir.D04G116900 Gossypium hirsutum HOM05D000082 ORTHO05D009107 1.5e-20 104.0 139 51.1
Duzib093G0578 Durio zibethinus HOM05D000082 ORTHO05D009107 2.5e-20 103.2 139 49.6
MD12G1130000 Malus domestica HOM05D000082 ORTHO05D009107 2.5e-20 103.2 136 48.5
RcHm_v2.0_Chr3g0468101 Rosa chinensis HOM05D000082 ORTHO05D009107 2.5e-20 103.2 134 44.8
ClCG10G020730 Citrullus lanatus HOM05D000001 ORTHO05D009574 3.2e-20 102.8 147 44.9
FvH4_6g14890 Fragaria vesca HOM05D000082 ORTHO05D009107 3.2e-20 102.8 172 37.8
MSTRG.26740 Avicennia marina HOM05D000082 ORTHO05D009107 4.2e-20 102.4 144 46.5
FAN14G0917 Fragaria x ananassa HOM05D000001 ORTHO05D009574 4.2e-20 102.4 141 43.3
CsaV3_3G035280 Cucumis sativus L. HOM05D000082 ORTHO05D009107 7.2e-20 101.7 137 44.5
Sed0022305 Sechium edule HOM05D000082 ORTHO05D009107 7.2e-20 101.7 137 46.7
TWI53G1873 Tripterygium wilfordii HOM05D000082 ORTHO05D009107 1.2e-19 100.9 136 47.8
Potri.016G082500 Populus trichocarpa HOM05D000082 ORTHO05D009107 1.6e-19 100.5 122 50.8
Lalb_Chr06g0171191 Lupinus albus HOM05D000082 ORTHO05D009107 4.7e-19 99.0 132 48.5
CANSAT80G2912 Cannabis sativa HOM05D000082 ORTHO05D009107 1.0e-18 97.8 128 50.8
Manes.09G071600 Manihot esculenta HOM05D000082 ORTHO05D009107 1.4e-18 97.4 111 51.4
Atru.chr8.2511 Acer truncatum HOM05D000082 ORTHO05D009107 3.0e-18 96.3 146 45.2
Ciclev10012410m.g Citrus clementina HOM05D000082 ORTHO05D009107 3.0e-18 96.3 137 46.0
Cpa.g.c45377 Carica papaya HOM05D000082 ORTHO05D009107 4.0e-18 95.9 139 48.9
Cpa.g.sc114.28 Carica papaya HOM05D000082 ORTHO05D009107 4.0e-18 95.9 139 48.9
BcaNung03277 Brassica carinata HOM05D000082 ORTHO05D009107 5.2e-18 95.5 136 45.6
C09p73930 Brassica napus HOM05D000082 ORTHO05D009107 5.2e-18 95.5 136 45.6
Potri.006G216200 Populus trichocarpa HOM05D000082 ORTHO05D009107 5.2e-18 95.5 138 47.1
Solyc10g084430.2 Solanum lycopersicum HOM05D000082 ORTHO05D009107 5.2e-18 95.5 142 45.8
HanXRQChr13g0399491 Helianthus annuus HOM05D000082 ORTHO05D009107 6.8e-18 95.1 125 47.2
FAN05G2118 Fragaria x ananassa HOM05D000001 ORTHO05D009574 2.0e-17 93.6 150 40.7
Aa31LG1G22140 Aethionema arabicum HOM05D000082 ORTHO05D009107 2.6e-17 93.2 137 44.5
PGR004G2602 Punica granatum HOM05D000082 ORTHO05D009107 2.6e-17 93.2 129 47.3
A10p32960 Brassica napus HOM05D000082 ORTHO05D009107 3.4e-17 92.8 135 43.0
BraA10t45333Z Brassica rapa HOM05D000082 ORTHO05D009107 3.4e-17 92.8 135 43.0
Sp6g39830 Schrenkiella parvula HOM05D000082 ORTHO05D009107 4.4e-17 92.4 148 43.2
BolC9t60128H Brassica oleracea HOM05D000082 ORTHO05D009107 5.7e-17 92.0 130 44.6
Thhalv10014308m.g Eutrema salsugineum HOM05D000082 ORTHO05D009107 9.8e-17 91.3 135 43.0
BraA02t04727Z Brassica rapa HOM05D000082 ORTHO05D009107 2.8e-16 89.7 135 41.5
CARHR210630 Cardamine hirsuta HOM05D000082 ORTHO05D009107 4.9e-16 89.0 135 43.0
AL6G12000 Arabidopsis lyrata HOM05D000082 ORTHO05D009107 1.1e-15 87.8 134 43.3
unitig_0.g695 Utricularia gibba HOM05D000082 ORTHO05D009107 1.8e-15 87.0 129 41.9
THA.LOC104816301 Tarenaya hassleriana HOM05D000082 ORTHO05D009107 2.4e-15 86.7 136 44.9
BcaC03g13049 Brassica carinata HOM05D000082 ORTHO05D009107 3.1e-15 86.3 135 40.7
C02p00600 Brassica napus HOM05D000082 ORTHO05D009107 3.1e-15 86.3 135 40.7
AT5G02750 Arabidopsis thaliana HOM05D000082 ORTHO05D009107 9.2e-15 84.7 134 40.3
THA.LOC104826993 Tarenaya hassleriana HOM05D000082 ORTHO05D009107 1.6e-14 84.0 141 41.1
CDE02G4454 Ceratophyllum demersum HOM05D003162 ORTHO05D003599 1.5e-12 77.4 170 32.9
Carub.0006s0151 Capsella rubella HOM05D000082 ORTHO05D009107 8.0e-11 71.6 132 37.1
BcaC06g32010 Brassica carinata HOM05D000082 ORTHO05D009107 2.3e-10 70.1 158 34.2
MBI05_g04040_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D009107 2.6e-09 66.6 130 38.5
ATR0594G085 Amborella trichopoda HOM05D000082 ORTHO05D009107 2.2e-08 63.5 136 36.0
CAN.G867.4 Capsicum annuum HOM05D000082 ORTHO05D009107 1.6e-06 57.4 47 55.3


User provided reference genes

Program Settings