Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1035 Trochodendron aralioides HOM05D000561 ORTHO05D415312 3.1e-98 361.7 168 100.0
Atru.chr3.2740 Acer truncatum HOM05D000561 ORTHO05D000514 8.6e-08 61.2 41 68.3
ATR0605G067 Amborella trichopoda HOM05D000561 ORTHO05D000514 1.1e-07 60.8 41 68.3
Cfa009761 Carpinus fangiana HOM05D000561 ORTHO05D000514 1.1e-07 60.8 41 68.3
Haze_23125 Corylus avellana HOM05D000561 ORTHO05D000514 1.1e-07 60.8 41 68.3
MELO3C005531.2 Cucumis melo HOM05D000561 ORTHO05D000514 1.1e-07 60.8 41 68.3
CsaV3_5G004230 Cucumis sativus L. HOM05D000561 ORTHO05D000514 1.1e-07 60.8 41 68.3
Sed0011306 Sechium edule HOM05D000561 ORTHO05D000514 1.1e-07 60.8 41 68.3
Ciclev10015576m.g Citrus clementina HOM05D000561 ORTHO05D000514 1.9e-07 60.1 41 65.9
Nn2g15468 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.9e-07 60.1 41 68.3
GSVIVG01025280001 Vitis vinifera HOM05D000561 ORTHO05D000514 2.5e-07 59.7 38 73.7
CiPaw.14G119600 Carya illinoinensis HOM05D000561 ORTHO05D000514 3.3e-07 59.3 41 65.9
ClCG01G004050 Citrullus lanatus HOM05D000561 ORTHO05D000514 3.3e-07 59.3 41 65.9
MBI01_g18892_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D000514 3.3e-07 59.3 38 73.7
TWI34G1960 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 3.3e-07 59.3 41 65.9
TAR636G2461 Trochodendron aralioides HOM05D000561 ORTHO05D000514 3.3e-07 59.3 38 73.7
arahy.Tifrunner.gnm1.ann1.GE7Z65 Arachis hypogaea HOM05D000561 ORTHO05D000514 4.3e-07 58.9 41 65.9
arahy.Tifrunner.gnm1.ann1.Z4F097 Arachis hypogaea HOM05D000561 ORTHO05D000514 4.3e-07 58.9 41 65.9
CANSAT54G1581 Cannabis sativa HOM05D000561 ORTHO05D000514 4.3e-07 58.9 41 65.9
COL.COLO4_24888 Corchorus olitorius HOM05D000561 ORTHO05D000514 4.3e-07 58.9 41 65.9
Phvul.L009343 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 4.3e-07 58.9 41 65.9
HanXRQChr13g0405951 Helianthus annuus HOM05D000561 ORTHO05D000514 5.6e-07 58.5 38 71.1
Hma1.2p1_0606F.1_g188060 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 5.6e-07 58.5 41 65.9
Rhsim13G0222000 Rhododendron simsii HOM05D000561 ORTHO05D000514 5.6e-07 58.5 41 65.9
vmacro04206 Vaccinium macrocarpon HOM05D000561 ORTHO05D000514 5.6e-07 58.5 41 65.9
Duzib170G1122 Durio zibethinus HOM05D000561 ORTHO05D000514 7.3e-07 58.2 41 65.9
Gohir.A08G013600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 7.3e-07 58.2 41 65.9
Gohir.D08G024100 Gossypium hirsutum HOM05D000561 ORTHO05D000514 7.3e-07 58.2 41 65.9
Gorai.004G019500 Gossypium raimondii HOM05D000561 ORTHO05D000514 7.3e-07 58.2 41 65.9
Actinidia16326 Actinidia chinensis HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
CSS0013585 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
CSS0034072 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
CSS0038277 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
CDE10G0196 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
ECA248G2811 Erigeron canadensis HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
Lsat_1_v5_gn_1_66300 Lactuca sativa HOM05D000561 ORTHO05D000514 9.5e-07 57.8 38 71.1
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 9.5e-07 57.8 38 71.1
Nitab4.5_0005819g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 9.5e-07 57.8 41 63.4
Nitab4.5_0006994g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 9.5e-07 57.8 41 63.4
Aqoxy1G00237 Aquilegia oxysepala HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
MSTRG.21383 Avicennia marina HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
Ca_01295_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
Duzib150G0013 Durio zibethinus HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
Duzib168G0910 Durio zibethinus HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
Gohir.A07G124500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
Gohir.D07G128800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
Os03g0174100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
Peaxi162Scf00203g01318 Petunia axillaris HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
Potri.009G054400 Populus trichocarpa HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
QL01p004975 Quercus lobata HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
Sabra09G0039700 Salix brachista HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
SalBow2G0499 Salvia bowleyana HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
SalBow6G1629 Salvia bowleyana HOM05D000561 ORTHO05D000514 1.2e-06 57.4 41 63.4
Thecc.09G232000 Theobroma cacao HOM05D000561 ORTHO05D000514 1.2e-06 57.4 38 71.1
Solyc11g065880.2 Solanum lycopersicum HOM05D000561 ORTHO05D000514 1.6e-06 57.0 41 63.4
Sopen11g025610 Solanum pennellii HOM05D000561 ORTHO05D000514 1.6e-06 57.0 41 63.4
SGA_v2.0_scaffold247G44873 Striga asiatica HOM05D000561 ORTHO05D000514 1.6e-06 57.0 41 63.4
FAN23G0318 Fragaria x ananassa HOM05D000561 ORTHO05D000514 2.1e-06 56.6 41 63.4
Glyma.13G340200 Glycine max HOM05D000561 ORTHO05D000514 2.1e-06 56.6 41 63.4
Manes.14G001900 Manihot esculenta HOM05D000561 ORTHO05D000514 2.1e-06 56.6 41 63.4
RcHm_v2.0_Chr3g0491021 Rosa chinensis HOM05D000561 ORTHO05D000514 2.1e-06 56.6 41 63.4
PGSC0003DMG400007361 Solanum tuberosum HOM05D000561 ORTHO05D000514 2.1e-06 56.6 41 63.4
EL10Ac4g10266 Beta vulgaris HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
EL10Ac4g10282 Beta vulgaris HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
Cpa.g.sc84.66 Carica papaya HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
AUR62000109 Chenopodium quinoa HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
AUR62019286 Chenopodium quinoa HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
Cc02_g33880 Coffea canephora HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
FvH4_1g30440 Fragaria vesca HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
FAN19G1629 Fragaria x ananassa HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 2.8e-06 56.2 41 63.4
Hund07519 Selenicereus undatus HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
SEGI_02787 Sequoiadendron giganteum HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
SEGI_32634 Sequoiadendron giganteum HOM05D000561 ORTHO05D000514 2.8e-06 56.2 41 63.4
DCAR_029947 Daucus carota HOM05D000561 ORTHO05D000514 3.6e-06 55.8 42 61.9
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 3.6e-06 55.8 41 58.5
Nitab4.5_0000994g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 3.6e-06 55.8 41 58.5
Nitab4.5_0009280g0010 Nicotiana tabacum HOM05D000561 ORTHO05D000514 3.6e-06 55.8 41 58.5
PSO339G4568 Papaver somniferum HOM05D000561 ORTHO05D000514 3.6e-06 55.8 38 68.4
PSO384G1656 Papaver somniferum HOM05D000561 ORTHO05D000514 3.6e-06 55.8 38 68.4
Ah.06g194320 Amaranthus hybridus HOM05D000561 ORTHO05D000514 4.7e-06 55.5 38 68.4
BcaB01g04865 Brassica carinata HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
BcaB01g05142 Brassica carinata HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
BcaNung07025 Brassica carinata HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
A03p09450 Brassica napus HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
C03p11030 Brassica napus HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
BolC3t13572H Brassica oleracea HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
BraA03t10263Z Brassica rapa HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
CSS0025411 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 4.7e-06 55.5 38 68.4
DCAR_003617 Daucus carota HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 58.5
Lj8A169G90 Lonicera japonica HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 61.0
Zm00001eb005630 Zea mays HOM05D000561 ORTHO05D000514 4.7e-06 55.5 41 63.4
CSS0032409 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 6.2e-06 55.1 41 56.1
Prupe.5G028700 Prunus persica HOM05D000561 ORTHO05D000514 6.2e-06 55.1 41 63.4
Sc16g0011530 Simmondsia chinensis HOM05D000561 ORTHO05D000514 6.2e-06 55.1 41 61.0
VMungo1080G0863 Vigna mungo HOM05D000561 ORTHO05D000514 6.2e-06 55.1 41 61.0
GSVIVG01037634001 Vitis vinifera HOM05D000561 ORTHO05D000514 6.2e-06 55.1 41 58.5
CSS0048551 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 8.0e-06 54.7 38 68.4
Glyma.11G133200 Glycine max HOM05D000561 ORTHO05D000514 8.0e-06 54.7 41 61.0
Glyma.12G057300 Glycine max HOM05D000561 ORTHO05D000514 8.0e-06 54.7 41 63.4
MBI18_g46355_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D000514 8.0e-06 54.7 41 58.5
Peaxi162Scf01398g00012 Petunia axillaris HOM05D000561 ORTHO05D000514 8.0e-06 54.7 41 61.0
THA.LOC104811163 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 8.0e-06 54.7 41 61.0


User provided reference genes

Program Settings