Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 5.2e-86 320.9 144 100.0
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 3.7e-84 314.7 144 97.9
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 1.7e-65 252.7 146 78.8
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 6.5e-65 250.8 138 81.2
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 2.5e-64 248.8 146 77.4
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 7.2e-64 247.3 132 83.3
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 2.8e-63 245.4 132 82.6
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 6.1e-63 244.2 146 77.4
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.0e-62 241.9 144 75.7
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.2e-61 240.0 144 73.6
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 7.5e-61 237.3 124 82.3
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 1.3e-60 236.5 144 74.3
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 2.4e-59 232.3 146 74.0
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 9.2e-59 230.3 129 77.5
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 1.6e-58 229.6 145 75.2
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 2.7e-58 228.8 144 72.9
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 7.8e-58 227.3 151 69.5
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 1.7e-57 226.1 150 70.0
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 2.3e-57 225.7 148 70.3
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 5.0e-57 224.6 145 69.0
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.5e-56 223.0 143 69.9
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 2.5e-56 222.2 145 70.3
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 3.3e-56 221.9 143 70.6
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 9.5e-56 220.3 148 68.2
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 9.5e-56 220.3 146 70.5
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 9.5e-56 220.3 106 88.7
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 1.6e-55 219.5 149 69.1
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 2.1e-55 219.2 116 81.0
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.8e-55 218.8 147 72.1
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 3.6e-55 218.4 134 76.9
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 3.6e-55 218.4 131 75.6
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 4.7e-55 218.0 158 65.2
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 4.7e-55 218.0 137 72.3
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 8.0e-55 217.2 134 76.1
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.4e-54 216.5 149 67.8
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 2.3e-54 215.7 132 74.2
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 3.0e-54 215.3 142 69.7
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 5.2e-54 214.5 148 65.5
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 3.4e-53 211.8 142 69.0
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 3.4e-53 211.8 147 66.0
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 1.3e-52 209.9 149 65.8
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 1.3e-52 209.9 144 64.6
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.3e-52 209.9 193 54.9
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 3.7e-52 208.4 137 69.3
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 4.9e-52 208.0 121 73.6
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 4.9e-52 208.0 147 65.3
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 4.9e-52 208.0 126 69.8
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 8.3e-52 207.2 124 72.6
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.8e-51 206.1 110 79.1
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.8e-51 206.1 110 79.1
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.4e-51 205.7 132 74.2
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 2.7e-50 202.2 145 64.1
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 4.6e-50 201.4 105 81.0
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 7.8e-50 200.7 105 80.0
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 3.0e-49 198.7 104 77.9
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 3.0e-49 198.7 123 69.1
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 3.6e-47 191.8 105 74.3
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 4.7e-47 191.4 91 87.9
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 6.2e-47 191.0 105 77.1
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 5.4e-43 177.9 104 69.2
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 4.3e-40 168.3 104 69.2
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 7.3e-40 167.5 86 82.6
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 9.5e-40 167.2 104 66.3
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.2e-39 166.8 100 71.0
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 1.1e-38 163.7 76 89.5
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 3.4e-37 158.7 77 85.7
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 4.4e-37 158.3 97 70.1
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 7.3e-32 141.0 113 59.3
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 4.4e-29 131.7 74 73.0
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 5.8e-29 131.3 74 73.0
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 7.1e-27 124.4 103 59.2
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.9e-17 92.0 51 68.6
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 1.6e-07 60.1 62 48.4
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.1e-06 57.4 38 55.3
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 1.8e-06 56.6 32 71.9


User provided reference genes

Program Settings