Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.3e-214 748.0 361 100.0
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 7.3e-198 693.7 361 92.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 6.2e-197 690.6 361 90.9
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 5.8e-195 684.1 361 90.0
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 9.9e-195 683.3 361 89.2
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 2.2e-194 682.2 358 89.7
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 2.2e-194 682.2 361 89.2
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 2.2e-194 682.2 361 89.2
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.8e-194 681.4 357 89.6
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 8.4e-194 680.2 361 89.2
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.1e-193 679.9 361 89.5
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 4.2e-193 677.9 360 90.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 4.2e-193 677.9 361 88.1
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 7.1e-193 677.2 361 88.6
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 3.5e-192 674.9 359 88.0
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.0e-191 673.3 361 87.8
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 3.0e-191 671.8 359 89.1
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 3.9e-191 671.4 361 87.0
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 3.9e-191 671.4 361 88.1
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 3.9e-191 671.4 362 88.4
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.9e-190 669.1 361 89.8
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.9e-190 669.1 359 88.3
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.5e-190 668.7 361 87.0
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.3e-190 668.3 361 86.4
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 4.3e-190 667.9 359 87.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.3e-190 667.9 361 86.1
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 5.6e-190 667.5 361 86.7
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 7.3e-190 667.2 361 87.3
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 9.6e-190 666.8 361 85.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 86.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 86.7
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.3e-189 666.4 361 86.4
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 3.6e-189 664.8 357 87.7
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.1e-188 663.3 356 87.4
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 86.4
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 2.4e-188 662.1 356 87.1
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 86.1
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.2e-187 659.8 371 86.0
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.5e-187 659.4 361 85.9
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.6e-187 658.7 361 86.4
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 3.4e-187 658.3 361 85.9
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 3.4e-187 658.3 361 84.8
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 9.9e-187 656.8 361 85.6
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.3e-186 656.4 361 85.9
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.7e-186 656.0 361 85.0
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.9e-186 655.2 361 85.9
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 2.9e-186 655.2 362 85.4
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.8e-186 654.8 361 84.8
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 4.9e-186 654.4 357 87.1
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 1.9e-185 652.5 360 86.4
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 4.2e-185 651.4 387 81.1
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 5.4e-185 651.0 357 85.7
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 9.3e-185 650.2 360 85.8
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 9.3e-185 650.2 360 85.8
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.6e-184 649.4 361 84.2
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.6e-184 649.4 360 85.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-184 649.0 361 85.0
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 3.5e-184 648.3 358 85.5
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 4.6e-184 647.9 396 79.5
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 6.0e-184 647.5 359 83.6
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 7.9e-184 647.1 361 84.2
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.8e-183 646.0 361 83.9
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 3.0e-183 645.2 360 83.3
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 5.1e-183 644.4 361 83.1
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.5e-182 642.9 360 85.0
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.9e-182 642.5 417 76.0
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 4.3e-182 641.3 358 84.4
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.8e-181 638.6 360 83.6
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.1e-180 636.7 357 83.2
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 3.1e-180 635.2 428 73.8
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.0e-180 634.8 360 82.8
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 4.0e-180 634.8 340 87.4
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 9.0e-180 633.6 358 83.0
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.2e-179 633.3 357 84.0
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 4.5e-179 631.3 358 83.2
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.0e-178 630.2 358 82.4
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.0e-178 630.2 358 82.4
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.0e-178 630.2 358 82.4
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.0e-178 630.2 358 83.0
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.3e-178 629.8 358 82.1
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.2e-178 629.0 401 75.8
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 2.9e-178 628.6 357 82.4
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.9e-177 625.9 358 81.6
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 5.1e-175 617.8 358 81.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 81.6
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.5e-174 615.5 358 81.6
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.3e-174 615.1 360 81.4
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 4.3e-174 614.8 358 81.3
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 7.4e-174 614.0 358 81.3
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.8e-173 612.1 386 75.9
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 3.1e-172 608.6 366 77.9
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 4.5e-171 604.7 366 76.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.5e-171 604.7 314 91.7
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 7.9e-168 594.0 357 79.3
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 1.1e-166 590.1 357 78.2
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 6.1e-160 567.8 361 75.9
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 3.9e-159 565.1 335 80.0
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 9.7e-158 560.5 314 84.7
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.3e-157 560.1 302 88.4
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 5.9e-155 551.2 306 86.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 4.8e-149 531.6 403 67.5
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 9.1e-148 527.3 364 72.3
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.6e-147 526.6 357 70.3
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 3.5e-147 525.4 357 70.0
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.8e-143 513.1 357 67.8
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 9.7e-142 507.3 358 69.0
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.6e-131 473.4 252 89.7
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 8.5e-130 467.6 361 66.5
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.1e-129 467.2 365 66.0
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 4.2e-129 465.3 368 62.0
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 5.2e-127 458.4 240 92.1
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 6.4e-117 424.9 239 85.4
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.5e-110 403.7 211 89.1
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.8e-104 382.9 204 89.7
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 4.2e-76 289.3 180 81.1
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.1e-72 276.9 152 82.2
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.3e-66 256.9 161 75.2
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.3e-56 224.6 118 83.9
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 4.1e-55 219.5 126 79.4
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 2.8e-48 196.8 207 53.1
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.3e-45 188.0 341 37.5
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 5.3e-39 166.0 98 83.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.8e-34 151.0 117 67.5
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-25 121.7 59 91.5
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.3e-24 118.2 111 56.8
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 3.2e-20 103.6 79 68.4
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.4e-15 88.2 162 38.3
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.8e-15 87.8 39 94.9
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.3e-13 80.9 51 68.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.2e-09 68.6 305 26.6


User provided reference genes

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