Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.1e-244 848.2 483 100.0
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.1e-119 433.0 315 91.4
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 1.4e-87 327.8 323 62.5
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.6e-83 314.3 308 68.5
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 8.0e-83 312.0 308 78.2
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 6.4e-80 302.4 315 58.1
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 2.8e-75 287.0 292 63.0
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 1.8e-74 284.3 323 58.8
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 9.8e-73 278.5 315 59.7
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 1.7e-72 277.7 321 55.8
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 8.3e-72 275.4 302 55.6
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 1.4e-71 274.6 321 61.7
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 1.4e-71 274.6 326 56.4
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 1.4e-71 274.6 322 59.3
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 9.2e-71 271.9 322 61.5
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 1.2e-70 271.6 316 59.5
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.1e-70 270.8 329 54.7
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 6.0e-70 269.2 321 60.7
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.3e-69 268.1 322 60.9
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 5.1e-69 266.2 326 56.1
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.2e-67 261.5 325 57.2
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.6e-67 261.2 317 56.5
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 1.6e-67 261.2 315 56.2
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.6e-67 261.2 316 58.2
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.8e-67 260.4 332 54.8
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 4.7e-67 259.6 299 67.6
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 6.2e-67 259.2 323 57.9
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 1.4e-66 258.1 325 54.2
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 8.9e-66 255.4 336 55.7
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.5e-65 254.6 323 54.5
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 2.0e-65 254.2 339 56.0
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 3.4e-65 253.4 324 58.0
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 3.4e-65 253.4 324 58.0
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 1.7e-64 251.1 325 55.7
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 2.2e-64 250.8 327 57.2
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 3.7e-64 250.0 327 57.2
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 1.4e-63 248.1 304 57.6
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.4e-63 248.1 323 57.6
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.4e-63 248.1 323 52.3
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 3.2e-63 246.9 319 52.7
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 7.1e-63 245.7 329 51.1
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 9.2e-63 245.4 328 56.7
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 7.8e-62 242.3 296 56.1
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.3e-61 241.5 338 54.7
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.3e-61 241.5 334 51.8
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 2.3e-61 240.7 315 47.0
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 3.9e-61 240.0 300 55.3
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 5.1e-61 239.6 329 52.6
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 8.6e-61 238.8 315 54.6
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 8.6e-61 238.8 327 58.4
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 2.5e-60 237.3 322 47.8
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 2.5e-60 237.3 288 58.7
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 5.6e-60 236.1 314 50.6
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 5.6e-60 236.1 324 54.3
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 5.6e-60 236.1 329 53.8
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 7.3e-60 235.7 318 50.9
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 9.6e-60 235.3 320 53.4
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 1.6e-59 234.6 298 58.7
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 2.1e-59 234.2 331 51.7
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 4.7e-59 233.0 303 57.4
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 4.7e-59 233.0 293 55.6
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 8.1e-59 232.3 327 45.6
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 8.1e-59 232.3 301 57.1
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 1.4e-58 231.5 316 54.4
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 1.8e-58 231.1 179 68.2
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 3.1e-58 230.3 309 58.6
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 4.0e-58 229.9 317 51.1
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 5.2e-58 229.6 322 52.5
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 5.2e-58 229.6 336 50.3
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 5.2e-58 229.6 304 51.0
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 8.9e-58 228.8 290 54.1
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 8.9e-58 228.8 304 54.3
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-57 228.4 318 52.5
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 1.5e-57 228.0 294 56.8
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.5e-57 228.0 304 55.6
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.0e-57 227.6 300 61.7
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 2.2e-56 224.2 337 49.9
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 2.2e-56 224.2 319 49.2
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 2.9e-56 223.8 308 53.9
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 6.4e-56 222.6 297 57.6
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 7.1e-55 219.2 319 58.3
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 1.2e-54 218.4 296 49.7
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.6e-54 218.0 287 51.9
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 4.6e-54 216.5 314 51.3
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 1.0e-53 215.3 302 50.0
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 1.3e-53 214.9 330 45.5
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 2.3e-53 214.2 302 53.6
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 5.1e-53 213.0 168 63.1
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 5.1e-53 213.0 296 51.4
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 1.5e-52 211.5 307 49.8
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 9.6e-52 208.8 299 50.8
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 2.1e-51 207.6 294 52.7
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 8.1e-51 205.7 327 56.3
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.1e-50 205.3 315 47.9
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 5.8e-49 199.5 324 48.1
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 7.6e-49 199.1 333 43.8
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 8.4e-48 195.7 305 45.2
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 1.2e-46 191.8 141 66.7
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 1.7e-45 188.0 287 53.7
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 6.6e-45 186.0 305 47.9
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.1e-44 185.3 310 45.5
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 9.6e-44 182.2 307 44.6
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 2.6e-41 174.1 283 50.9
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 7.9e-38 162.5 321 45.8
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 6.7e-37 159.5 334 41.0
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.5e-36 157.5 272 47.1
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 1.2e-33 148.7 165 52.7
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 9.3e-31 139.0 276 53.3
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 1.2e-30 138.7 93 74.2
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 3.0e-29 134.0 99 66.7
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 8.2e-27 125.9 114 59.6
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 4.0e-26 123.6 110 60.9
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 6.9e-26 122.9 146 41.8
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 4.5e-25 120.2 254 45.7
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 4.3e-20 103.6 297 41.1
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 7.4e-20 102.8 73 65.8
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 1.4e-13 82.0 159 32.7
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 3.0e-13 80.9 107 38.3
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 5.9e-09 66.6 69 56.5


User provided reference genes

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