Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 3.1e-240 834.7 420 100.0
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.8e-184 649.4 427 77.3
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.7e-169 599.7 419 74.0
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.2e-167 593.6 427 71.7
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 1.2e-167 593.6 437 69.8
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 1.0e-166 590.5 421 73.2
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 1.7e-166 589.7 398 75.1
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.3e-166 589.3 426 71.1
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 7.3e-165 584.3 398 75.4
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 3.6e-164 582.0 377 78.0
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 4.0e-163 578.6 421 70.5
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 5.2e-163 578.2 428 68.7
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 8.9e-163 577.4 419 70.4
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.5e-162 576.6 421 70.5
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.4e-162 575.5 421 70.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 5.8e-162 574.7 428 68.9
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 9.9e-162 573.9 422 70.6
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.7e-161 572.0 421 69.6
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 1.4e-160 570.1 383 74.7
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 9.2e-160 567.4 387 74.4
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 1.7e-158 563.1 383 73.9
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 7.3e-157 557.8 423 68.1
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 1.2e-156 557.0 426 69.0
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.6e-156 556.6 398 71.4
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.8e-155 553.1 409 70.4
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 5.2e-155 551.6 409 70.2
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 5.2e-155 551.6 430 66.3
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 6.8e-155 551.2 423 67.4
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 3.8e-153 545.4 434 64.5
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 4.9e-153 545.0 429 65.5
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 4.9e-153 545.0 417 67.9
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 6.4e-153 544.7 429 66.0
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 6.4e-153 544.7 433 66.3
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 8.4e-153 544.3 372 73.1
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.4e-152 542.7 431 66.6
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 4.1e-152 542.0 388 70.4
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 9.2e-152 540.8 422 65.9
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.6e-151 538.5 411 67.6
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 7.8e-151 537.7 410 67.3
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.3e-150 536.2 425 67.5
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 3.0e-150 535.8 420 65.5
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 3.0e-150 535.8 427 65.3
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 1.1e-149 533.9 431 63.6
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.2e-148 530.4 382 69.6
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 2.1e-148 529.6 407 66.3
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 2.8e-148 529.3 415 65.5
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.4e-147 526.9 412 68.2
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.4e-147 526.9 414 65.0
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.4e-147 526.2 410 66.8
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 9.0e-147 524.2 397 67.3
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.7e-145 520.0 410 66.8
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 2.9e-145 519.2 424 64.9
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 4.9e-145 518.5 382 68.1
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 4.9e-145 518.5 424 64.9
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 7.8e-143 511.1 373 69.2
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 1.3e-142 510.4 392 67.3
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 2.3e-142 509.6 459 60.1
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 6.6e-142 508.1 387 68.7
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 1.6e-140 503.4 422 64.5
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 2.8e-140 502.7 419 64.7
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 1.1e-139 500.7 403 64.0
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.0e-138 496.5 422 63.0
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.2e-137 493.0 324 73.5
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 4.9e-137 491.9 421 62.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 6.0e-135 485.0 312 76.3
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.0e-134 484.2 312 76.0
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 5.6e-133 478.4 409 63.6
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 1.7e-129 466.8 426 61.0
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.9e-128 463.4 424 57.5
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 4.2e-128 462.2 329 69.0
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 1.2e-127 460.7 454 57.5
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 3.9e-126 455.7 379 63.9
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 8.7e-126 454.5 430 57.7
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 3.7e-124 449.1 353 66.0
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 7.6e-114 414.8 387 58.4
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 1.2e-111 407.5 260 78.5
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.1e-107 394.4 289 68.5
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 1.1e-107 394.4 294 71.1
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.1e-107 394.4 391 53.7
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.3e-105 387.5 311 64.3
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 1.6e-87 327.4 254 66.9
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.1e-87 327.0 261 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 6.1e-71 272.3 422 40.0
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 2.7e-66 256.9 417 37.6
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.2e-63 248.1 369 40.7
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 4.7e-63 246.1 205 62.9
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 5.6e-56 222.6 213 57.7
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 1.8e-54 217.6 168 67.9
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.1e-48 198.4 163 62.0
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 3.3e-48 196.8 171 60.2
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.9e-41 173.3 139 64.7
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 1.3e-15 88.6 78 55.1
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 8.4e-12 75.9 256 26.6
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 1.4e-11 75.1 70 54.3
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 1.9e-11 74.7 73 54.8
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 3.5e-10 70.5 63 60.3
Cre03.g145067 Chlamydomonas reinhardtii HOM05D007414 ORTHO05D009482 8.2e-07 59.3 78 43.6
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 1.4e-06 58.5 53 64.2
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 5.3e-06 56.6 56 51.8
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 9.0e-06 55.8 239 26.8


User provided reference genes

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