Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.0e-306 1055.8 508 100.0
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 6.0e-222 774.2 488 74.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.9e-216 754.6 505 71.5
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.9e-215 752.7 502 71.7
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 3.9e-213 745.0 494 70.6
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 6.7e-213 744.2 498 71.1
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-212 743.0 509 69.9
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-212 742.7 509 69.9
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-212 742.7 509 69.9
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.3e-212 741.9 509 70.1
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 5.6e-212 741.1 507 69.6
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.6e-212 740.3 509 69.9
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-211 740.0 509 69.9
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-211 739.6 509 69.9
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.1e-211 737.3 509 69.7
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.1e-211 737.3 509 69.5
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-210 735.3 509 69.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-210 734.9 509 69.4
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.9e-210 734.2 509 69.4
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.4e-209 731.9 509 69.4
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 8.4e-208 727.2 486 70.6
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 2.3e-205 719.2 507 66.7
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 2.5e-204 715.7 487 69.8
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 5.6e-204 714.5 481 70.7
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 1.4e-202 709.9 486 68.5
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.6e-201 705.7 480 70.0
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 2.2e-200 702.6 502 67.5
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 8.4e-200 700.7 505 66.1
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 7.9e-198 694.1 500 67.8
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 2.3e-197 692.6 508 66.1
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 5.7e-196 688.0 502 65.9
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 3.7e-195 685.3 405 78.8
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.5e-193 679.9 494 67.0
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.5e-193 679.9 397 78.3
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.4e-191 673.3 403 76.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 5.5e-191 671.4 485 66.4
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.2e-190 670.2 480 66.9
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 3.6e-190 668.7 485 66.8
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.4e-189 666.8 480 66.7
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.1e-188 663.7 479 65.3
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.5e-188 663.3 404 75.2
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.3e-188 662.1 404 75.0
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.3e-187 660.2 481 66.1
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 8.2e-187 657.5 480 65.8
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.4e-186 656.8 504 62.7
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 9.1e-186 654.1 362 82.0
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.6e-185 652.5 476 65.5
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 5.9e-185 651.4 502 62.0
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 3.8e-184 648.7 507 61.9
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.1e-183 647.1 485 63.9
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 2.5e-183 646.0 483 64.0
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 5.5e-183 644.8 401 74.8
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 5.5e-183 644.8 419 71.6
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 7.2e-183 644.4 404 72.5
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 2.7e-182 642.5 405 71.6
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.8e-181 639.8 412 70.6
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 8.8e-181 637.5 481 63.6
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.1e-180 637.1 393 75.6
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 2.6e-180 636.0 501 61.1
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 2.6e-180 636.0 472 64.4
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 5.7e-180 634.8 511 61.8
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 6.3e-179 631.3 406 70.7
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 1.8e-178 629.8 408 71.8
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 2.0e-177 626.3 501 60.7
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 2.6e-177 625.9 504 60.7
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 5.5e-175 618.2 489 62.8
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 9.4e-175 617.5 403 71.7
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.6e-174 616.7 486 61.3
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 2.1e-174 616.3 400 71.2
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 4.7e-174 615.1 473 63.0
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 8.0e-174 614.4 378 74.1
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.8e-173 613.2 405 70.4
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 2.3e-173 612.8 489 61.6
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 7.4e-172 607.8 401 69.8
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.3e-171 607.1 396 71.5
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 3.1e-170 602.4 399 69.9
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 5.3e-170 601.7 408 68.6
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 2.6e-169 599.4 406 67.7
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 2.5e-167 592.8 514 57.2
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.2e-166 590.5 392 69.1
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.1e-166 589.7 372 71.8
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 4.7e-166 588.6 507 57.0
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 2.3e-165 586.3 351 77.8
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 3.1e-162 575.9 371 70.4
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 4.1e-162 575.5 485 57.3
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 3.5e-161 572.4 362 71.5
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 6.5e-160 568.2 446 60.3
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.4e-157 560.5 351 73.2
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 5.7e-156 555.1 470 58.5
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 4.5e-153 545.4 410 61.5
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 4.9e-147 525.4 488 55.7
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 8.0e-134 481.5 400 57.2
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 5.8e-132 475.3 403 55.3
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.7e-131 473.8 294 75.9
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 4.0e-125 452.6 356 61.5
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 6.8e-125 451.8 466 52.1
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 7.8e-113 411.8 411 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.4e-101 373.6 294 60.2
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.0e-92 344.0 210 74.8
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 5.5e-90 335.9 432 41.9
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.5e-84 317.8 307 55.4
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.1e-81 307.4 435 38.9
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 1.3e-70 271.6 447 36.7
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.5e-63 248.1 165 69.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 5.3e-61 239.6 406 36.7
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 3.4e-47 193.7 221 47.1
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.7e-44 184.1 420 29.5
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.8e-32 144.8 101 70.3
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 2.3e-27 127.9 298 30.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 1.9e-26 124.8 70 82.9
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 6.4e-22 109.8 303 27.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 4.7e-17 93.6 56 71.4
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 1.5e-10 72.0 83 45.8


User provided reference genes

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