Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.0e-101 372.5 191 100.0
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 5.3e-70 268.1 193 73.1
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 2.4e-62 242.7 199 69.8
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.2e-60 236.1 185 69.7
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.9e-59 233.0 200 65.0
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 3.2e-59 232.3 200 64.5
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 4.2e-59 231.9 197 65.5
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.2e-58 230.3 193 63.7
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.2e-58 230.3 193 63.7
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 2.1e-58 229.6 182 68.1
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 2.7e-58 229.2 179 68.2
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.7e-58 229.2 200 64.5
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 4.6e-58 228.4 195 64.1
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 7.9e-58 227.6 197 62.4
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.3e-57 226.9 199 64.8
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.8e-57 226.5 201 64.2
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 3.0e-57 225.7 182 67.6
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 3.0e-57 225.7 199 61.8
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 3.9e-57 225.3 147 76.2
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 3.9e-57 225.3 191 63.4
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 6.7e-57 224.6 197 64.5
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.1e-56 223.8 200 62.5
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.1e-56 223.8 196 64.3
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.9e-56 223.0 182 68.1
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 9.6e-56 220.7 166 68.7
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.3e-55 220.3 152 71.1
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.8e-55 219.2 198 62.1
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 6.2e-55 218.0 171 67.8
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.4e-54 216.9 178 64.6
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 4.0e-54 215.3 149 73.8
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 5.3e-54 214.9 174 64.4
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 6.9e-54 214.5 194 65.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.2e-53 213.8 160 68.8
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.2e-53 213.8 199 61.8
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 3.4e-53 212.2 149 71.1
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 5.8e-53 211.5 194 61.3
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 5.8e-53 211.5 181 64.1
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 5.8e-53 211.5 183 62.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 7.6e-53 211.1 171 67.3
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 7.6e-53 211.1 160 67.5
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 7.6e-53 211.1 197 60.9
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.3e-52 210.3 193 59.6
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.7e-52 209.9 199 59.8
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.7e-52 209.9 175 62.9
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 2.2e-52 209.5 187 61.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 2.9e-52 209.1 175 62.9
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 4.9e-52 208.4 180 61.1
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 8.4e-52 207.6 142 71.8
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.1e-51 207.2 154 68.2
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.2e-50 203.8 176 61.4
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.6e-50 203.4 136 68.4
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 6.0e-50 201.4 149 66.4
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.8e-49 199.9 114 84.2
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 3.0e-49 199.1 114 84.2
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 5.1e-49 198.4 202 56.4
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 5.1e-49 198.4 183 59.0
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 8.7e-49 197.6 146 66.4
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.9e-48 196.4 127 74.8
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 3.3e-48 195.7 123 77.2
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 4.3e-48 195.3 177 59.3
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 6.3e-47 191.4 195 54.9
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.4e-46 190.3 197 57.4
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.4e-46 189.5 136 66.2
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 6.9e-46 188.0 182 57.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.0e-45 186.4 123 74.0
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.0e-45 186.4 123 74.0
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.0e-45 186.4 150 64.7
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 4.5e-45 185.3 123 74.0
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 4.5e-45 185.3 123 74.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 4.5e-45 185.3 123 74.0
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 4.5e-45 185.3 123 74.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.0e-44 184.1 196 54.6
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.0e-44 184.1 123 73.2
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.2e-44 183.0 125 75.2
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.2e-44 183.0 183 56.3
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 5.0e-44 181.8 180 58.9
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.1e-43 180.6 142 69.0
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.1e-43 180.6 120 75.0
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 7.2e-43 177.9 184 57.6
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.6e-42 176.8 202 55.0
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.7e-42 176.0 147 59.9
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 6.1e-42 174.9 124 68.5
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 3.0e-41 172.6 125 71.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.1e-40 170.6 189 53.4
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.5e-40 170.2 204 51.0
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.3e-40 169.1 149 61.7
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.3e-40 169.1 135 68.9
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.1e-38 164.1 127 66.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.4e-38 163.7 140 62.1
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.4e-38 163.7 140 62.1
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.8e-38 163.3 177 55.4
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.7e-36 156.8 182 52.2
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.7e-31 139.0 136 51.5
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.5e-29 133.7 323 31.6
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 5.9e-29 131.7 150 48.0
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 7.7e-29 131.3 126 55.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.7e-28 130.2 141 48.2
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 3.2e-27 125.9 82 72.0
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.2e-26 124.0 82 72.0
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.7e-26 122.1 82 74.4
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.4e-25 120.6 82 73.2
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 3.5e-21 105.9 80 65.0
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 7.7e-13 78.2 50 74.0
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.5e-12 75.1 52 71.2
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 3.7e-07 59.3 101 42.6
VMungo0720G2657 Vigna mungo HOM05D007282 ORTHO05D009214 1.8e-06 57.0 86 44.2
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 7.0e-06 55.1 94 41.5


User provided reference genes

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