Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0867 Trochodendron aralioides HOM05D000953 ORTHO05D028404 1.3e-63 246.1 120 100.0
Nn2g12891 Nelumbo nucifera HOM05D000953 ORTHO05D000231 1.6e-11 73.2 46 78.3
Nn2g10470 Nelumbo nucifera HOM05D000953 ORTHO05D000231 5.9e-11 71.2 45 71.1
ClCG07G003160 Citrullus lanatus HOM05D000953 ORTHO05D000231 1.9e-09 66.2 45 62.2
Cfa001518 Carpinus fangiana HOM05D000953 ORTHO05D028404 2.5e-09 65.9 86 41.9
MELO3C034253.2 Cucumis melo HOM05D000953 ORTHO05D000231 2.5e-09 65.9 45 60.0
CsaV3_5G006910 Cucumis sativus L. HOM05D000953 ORTHO05D000231 2.5e-09 65.9 45 60.0
MD11G1113800 Malus domestica HOM05D000953 ORTHO05D000231 7.2e-09 64.3 44 72.7
MD03G1099600 Malus domestica HOM05D000953 ORTHO05D000231 2.8e-08 62.4 44 70.5
VMungo1080G0275 Vigna mungo HOM05D000953 ORTHO05D000231 2.8e-08 62.4 44 65.9
Haze_17023 Corylus avellana HOM05D000953 ORTHO05D000231 3.6e-08 62.0 45 62.2
Prupe.6G084600 Prunus persica HOM05D000953 ORTHO05D000231 3.6e-08 62.0 44 68.2
Lalb_Chr19g0137681 Lupinus albus HOM05D000953 ORTHO05D000231 6.1e-08 61.2 44 61.4
TWI38G0174 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 6.1e-08 61.2 49 59.2
QL01p033302 Quercus lobata HOM05D000953 ORTHO05D000231 8.0e-08 60.8 44 68.2
COL.COLO4_18449 Corchorus olitorius HOM05D000953 ORTHO05D000231 1.0e-07 60.5 44 68.2
Dinv32850 Davidia involucrata HOM05D000953 ORTHO05D000231 1.8e-07 59.7 44 68.2
Duzib150G0060 Durio zibethinus HOM05D000953 ORTHO05D000231 5.2e-07 58.2 44 63.6
Sed0006822 Sechium edule HOM05D000953 ORTHO05D000231 5.2e-07 58.2 44 52.3
Haze_24033 Corylus avellana HOM05D000953 ORTHO05D000231 6.8e-07 57.8 44 65.9
vmacro09150 Vaccinium macrocarpon HOM05D000953 ORTHO05D000231 8.9e-07 57.4 45 53.3
CSS0024070 Camellia sinensis var. sinensis HOM05D000953 ORTHO05D028404 1.2e-06 57.0 53 54.7
Duzib170G0033 Durio zibethinus HOM05D000953 ORTHO05D000231 1.5e-06 56.6 44 65.9
MBI14_g35851_MAGBIO Magnolia biondii HOM05D000953 ORTHO05D000231 1.5e-06 56.6 45 55.6
Duzib168G1564 Durio zibethinus HOM05D000953 ORTHO05D000231 2.0e-06 56.2 45 62.2
Sabra08G0036600 Salix brachista HOM05D000953 ORTHO05D000231 2.0e-06 56.2 55 56.4
Cpa.g.sc1.355 Carica papaya HOM05D000953 ORTHO05D028404 2.6e-06 55.8 57 50.9
Rhsim03G0126800 Rhododendron simsii HOM05D000953 ORTHO05D000231 3.4e-06 55.5 45 48.9
RhsimUnG0158800 Rhododendron simsii HOM05D000953 ORTHO05D000231 3.4e-06 55.5 45 48.9
RcHm_v2.0_Chr5g0062911 Rosa chinensis HOM05D000953 ORTHO05D000231 3.4e-06 55.5 47 61.7
arahy.Tifrunner.gnm1.ann1.08RMNX Arachis hypogaea HOM05D000953 ORTHO05D000231 4.4e-06 55.1 45 55.6
arahy.Tifrunner.gnm1.ann1.0R9IFB Arachis hypogaea HOM05D000953 ORTHO05D000231 4.4e-06 55.1 45 55.6
ClCG03G001890 Citrullus lanatus HOM05D000953 ORTHO05D000231 4.4e-06 55.1 43 51.2
FvH4_3g35001 Fragaria vesca HOM05D000953 ORTHO05D000231 4.4e-06 55.1 46 58.7
CANSAT54G1655 Cannabis sativa HOM05D000953 ORTHO05D000231 5.7e-06 54.7 44 63.6
MELO3C035376.2 Cucumis melo HOM05D000953 ORTHO05D000231 9.8e-06 53.9 43 48.8


User provided reference genes

Program Settings