Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 6.2e-89 330.9 179 100.0
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 2.6e-47 192.6 180 62.8
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 1.1e-45 187.2 174 60.3
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 7.9e-44 181.0 174 59.8
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 8.8e-43 177.6 179 60.3
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 8.8e-43 177.6 175 61.1
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 1.3e-41 173.7 153 62.7
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 1.7e-41 173.3 174 57.5
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 1.7e-41 173.3 174 58.6
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 4.8e-41 171.8 178 59.6
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 1.3e-38 163.7 157 60.5
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 2.5e-37 159.5 173 57.2
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 4.7e-36 155.2 175 54.9
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 6.7e-35 151.4 163 54.0
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 8.8e-35 151.0 171 54.4
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 8.8e-35 151.0 161 57.8
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 7.4e-34 147.9 170 55.3
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 3.7e-33 145.6 166 57.2
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 1.1e-32 144.1 155 56.8
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 3.1e-32 142.5 152 53.9
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 7.0e-32 141.4 171 55.0
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.5e-31 140.2 154 54.5
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 2.0e-31 139.8 171 51.5
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 5.9e-31 138.3 163 52.1
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 5.9e-31 138.3 163 52.1
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 1.7e-30 136.7 183 51.9
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 2.2e-30 136.3 177 49.7
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 2.2e-30 136.3 175 46.9
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 2.2e-30 136.3 175 46.9
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 3.8e-30 135.6 192 49.0
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 5.0e-30 135.2 182 48.4
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 8.5e-30 134.4 192 48.4
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 3.2e-29 132.5 177 49.2
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 4.2e-29 132.1 168 51.2
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 5.5e-29 131.7 166 53.6
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 1.6e-28 130.2 182 48.4
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.6e-28 130.2 177 49.2
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 4.7e-28 128.6 193 45.6
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 6.1e-28 128.3 175 47.4
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 8.0e-28 127.9 187 46.5
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 8.0e-28 127.9 181 49.2
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 1.4e-27 127.1 157 52.2
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 1.8e-27 126.7 181 49.2
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 2.3e-27 126.3 174 48.9
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 5.2e-27 125.2 155 47.1
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 1.1e-26 124.0 170 44.1
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.1e-26 124.0 170 42.9
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.1e-26 124.0 170 44.1
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 1.1e-26 124.0 169 47.9
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 2.0e-26 123.2 170 43.5
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 2.0e-26 123.2 171 50.3
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 5.7e-26 121.7 168 47.6
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 7.4e-26 121.3 177 45.2
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 7.4e-26 121.3 153 50.3
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 7.4e-26 121.3 177 44.6
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 9.7e-26 120.9 181 45.3
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 1.3e-25 120.6 188 45.2
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 1.3e-25 120.6 135 54.8
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 3.7e-25 119.0 163 45.4
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 3.7e-25 119.0 190 49.5
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 8.2e-25 117.9 169 46.7
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 8.2e-25 117.9 145 51.7
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.6e-23 113.6 146 49.3
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 2.0e-23 113.2 131 57.3
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 7.7e-23 111.3 152 49.3
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 2.2e-22 109.8 153 45.8
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 2.2e-22 109.8 192 44.8
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 2.2e-22 109.8 105 61.9
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 2.9e-22 109.4 195 44.1
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 1.1e-21 107.5 181 45.3
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.1e-21 107.5 151 47.7
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.9e-21 106.7 147 48.3
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 1.9e-21 106.7 149 46.3
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 4.2e-21 105.5 164 47.6
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 7.2e-21 104.8 117 53.0
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 9.4e-21 104.4 186 42.5
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 1.2e-20 104.0 162 42.6
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 2.7e-20 102.8 194 41.2
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 3.6e-20 102.4 167 46.7
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 6.1e-20 101.7 141 48.2
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 6.1e-20 101.7 146 47.9
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 8.0e-20 101.3 182 45.6
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 8.0e-20 101.3 182 45.6
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 8.0e-20 101.3 141 47.5
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 1.0e-19 100.9 166 46.4
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 1.0e-19 100.9 165 47.3
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 2.3e-19 99.8 185 39.5
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 2.3e-19 99.8 150 46.0
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 2.3e-19 99.8 166 41.6
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 5.2e-19 98.6 142 45.1
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 5.2e-19 98.6 172 44.8
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 1.5e-18 97.1 160 45.0
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 2.0e-18 96.7 165 44.2
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 3.4e-18 95.9 163 44.2
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 4.4e-18 95.5 147 46.3
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 5.7e-18 95.1 170 42.4
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.3e-17 94.0 153 41.2
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 2.2e-17 93.2 156 43.6
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 2.4e-16 89.7 192 36.5
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 3.1e-16 89.4 105 49.5
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 4.1e-16 89.0 162 42.0
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 7.0e-16 88.2 131 44.3
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 1.2e-15 87.4 138 44.2
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 1.2e-15 87.4 104 51.9
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 2.2e-14 83.2 140 42.1
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 2.9e-14 82.8 162 41.4
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 5.0e-14 82.0 88 55.7
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 5.0e-14 82.0 88 56.8
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 6.5e-14 81.6 93 55.9
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 1.1e-13 80.9 130 45.4
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 1.5e-13 80.5 69 66.7
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 7.2e-13 78.2 138 42.8
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 5.2e-11 72.0 72 55.6
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 2.6e-10 69.7 103 40.8
HPP92_022865 Vanilla planifolia HOM05D006969 ORTHO05D008826 1.7e-09 67.0 164 36.0
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 1.4e-08 63.9 74 50.0
ATR1127G190 Amborella trichopoda HOM05D006969 ORTHO05D008826 3.8e-06 55.8 131 40.5


User provided reference genes

Program Settings