Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 3.6e-208 728.0 371 100.0
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 6.0e-179 630.9 369 86.2
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 7.6e-158 560.8 372 76.6
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 7.6e-158 560.8 372 76.6
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.9e-157 558.1 372 77.2
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 2.5e-156 555.8 370 76.2
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 3.2e-156 555.4 372 76.9
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 4.2e-156 555.1 363 78.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.3e-154 550.1 372 75.5
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.8e-154 549.7 372 75.5
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 5.1e-154 548.1 369 78.0
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 6.7e-154 547.7 373 75.6
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 4.3e-153 545.0 371 74.7
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 7.4e-153 544.3 372 74.5
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.3e-152 543.5 372 76.1
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 4.8e-152 541.6 376 74.5
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 4.8e-152 541.6 374 75.9
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 3.1e-151 538.9 381 75.6
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 9.0e-151 537.3 365 76.4
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.5e-150 536.6 385 74.0
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.5e-150 536.6 372 73.9
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.0e-149 533.9 377 74.0
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.2e-149 532.7 376 76.3
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 2.9e-149 532.3 342 79.2
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 2.9e-149 532.3 376 74.5
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.2e-148 528.9 371 73.6
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 3.2e-148 528.9 370 75.1
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 7.2e-148 527.7 373 73.7
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.1e-147 526.2 375 72.3
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 3.5e-147 525.4 365 75.6
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 4.6e-147 525.0 385 71.4
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.0e-146 523.9 387 72.1
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.0e-146 523.9 369 76.7
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 2.3e-146 522.7 370 72.7
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 3.9e-146 521.9 383 72.8
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 6.7e-146 521.2 375 74.7
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.9e-145 519.6 384 73.2
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.5e-145 519.2 375 73.9
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 9.7e-145 517.3 378 72.0
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 2.2e-144 516.2 369 72.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 4.8e-144 515.0 380 73.4
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 4.8e-144 515.0 378 71.7
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 6.3e-144 514.6 358 75.1
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 8.2e-144 514.2 375 72.3
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.1e-143 513.8 376 73.1
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.1e-143 513.8 376 73.1
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.4e-143 513.5 379 71.8
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.4e-143 513.5 375 74.1
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.4e-143 513.5 383 73.4
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.4e-143 513.5 378 73.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.4e-143 513.5 378 72.8
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.4e-143 513.5 378 72.8
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 1.8e-143 513.1 376 73.7
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.8e-143 513.1 377 72.9
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 2.4e-143 512.7 340 77.1
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.4e-143 512.7 367 73.3
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 6.9e-143 511.1 375 72.8
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 6.9e-143 511.1 381 70.3
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 9.0e-143 510.8 400 69.2
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 2.6e-142 509.2 376 71.8
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 4.5e-142 508.4 377 72.1
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 5.9e-142 508.1 376 73.1
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.0e-141 507.3 383 71.3
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 5.0e-141 505.0 368 72.6
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 5.0e-141 505.0 383 70.0
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 1.4e-140 503.4 371 73.6
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.9e-140 503.1 374 70.9
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 5.5e-140 501.5 371 69.5
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 5.5e-140 501.5 370 73.8
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 1.6e-139 500.0 407 66.6
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 2.7e-139 499.2 383 71.0
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 3.6e-139 498.8 369 72.1
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.0e-138 497.3 373 71.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.4e-138 496.9 377 73.2
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 3.9e-138 495.4 374 70.3
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 6.7e-138 494.6 374 70.6
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.5e-137 493.4 375 71.2
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 1.5e-137 493.4 370 71.1
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 2.0e-137 493.0 373 70.0
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 3.3e-137 492.3 369 70.5
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 5.7e-137 491.5 327 78.0
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 9.7e-137 490.7 363 71.3
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 1.3e-133 480.3 368 70.4
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.2e-133 479.6 383 66.6
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.5e-133 478.0 367 69.8
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 2.5e-132 476.1 376 68.6
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 7.2e-132 474.6 368 68.8
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.2e-131 473.8 337 72.4
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.2e-131 473.8 325 76.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.4e-130 470.3 332 74.7
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 5.1e-130 468.4 279 84.2
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.1e-129 467.2 332 74.4
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 7.4e-129 464.5 324 74.7
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 1.7e-128 463.4 390 65.1
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.2e-128 463.0 385 64.7
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 2.8e-128 462.6 368 67.4
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 9.1e-127 457.6 322 74.5
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.3e-125 453.8 358 66.5
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 3.6e-123 445.7 331 72.2
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 3.7e-120 435.6 320 72.5
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.6e-118 430.3 341 69.2
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 4.0e-114 415.6 369 63.7
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 6.8e-114 414.8 297 70.7
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 8.8e-114 414.5 293 74.1
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 4.1e-111 405.6 292 69.5
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.0e-109 401.0 327 64.5
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 3.4e-105 386.0 285 67.0
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 5.7e-105 385.2 234 83.8
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.3e-100 368.2 295 65.8
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 1.2e-94 350.9 297 66.0
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 3.3e-92 342.8 206 84.0
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.3e-84 315.1 238 72.3
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 5.2e-82 308.9 268 61.2
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 8.9e-82 308.1 262 58.8
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 3.5e-78 296.2 279 59.1
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 6.0e-78 295.4 259 58.3
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 3.6e-75 286.2 243 65.4
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 6.0e-70 268.9 207 70.0
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.1e-69 265.8 184 72.8
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 3.6e-59 233.0 158 76.6
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 3.8e-56 223.0 187 65.2
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 4.2e-55 219.5 188 63.8
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 3.5e-54 216.5 146 73.3
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 5.1e-53 212.6 183 63.4
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 9.6e-52 208.4 183 62.8
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.5e-49 199.5 116 86.2
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 7.9e-46 188.7 109 85.3
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 3.9e-45 186.4 134 74.6
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.7e-36 156.0 114 68.4
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 3.6e-30 136.7 257 33.5
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 7.9e-30 135.6 241 36.1
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 5.3e-26 122.9 155 50.3
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.2e-25 121.7 191 45.5
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.8e-21 107.8 241 30.3
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 3.9e-21 106.7 77 72.7
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.9e-21 106.7 74 71.6
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 8.8e-21 105.5 167 37.7
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.7e-19 101.3 109 56.9
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 4.1e-18 96.7 50 92.0
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 4.2e-15 86.7 84 53.6


User provided reference genes

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