Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0806 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.3e-99 366.3 178 100.0
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 4.5e-55 218.4 150 74.0
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 2.8e-41 172.6 153 61.4
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 2.2e-25 119.8 150 49.3
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 2.8e-25 119.4 136 50.7
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 6.3e-25 118.2 150 48.7
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 7.7e-23 111.3 158 43.7
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 2.9e-22 109.4 138 50.0
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 6.5e-22 108.2 150 47.3
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 6.5e-22 108.2 136 49.3
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 1.4e-21 107.1 146 45.9
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 4.7e-20 102.1 159 43.4
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 6.1e-20 101.7 150 43.3
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 1.0e-19 100.9 136 49.3
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 1.8e-19 100.1 139 46.0
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.0e-19 99.4 149 41.6
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.9e-19 99.0 149 41.6
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 5.1e-19 98.6 149 41.6
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 3.3e-18 95.9 149 40.9
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 4.4e-18 95.5 130 49.2
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.4e-18 94.7 126 46.0
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 1.7e-17 93.6 141 43.3
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 1.7e-17 93.6 148 42.6
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 1.1e-16 90.9 150 42.7
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 2.6e-15 86.3 219 33.8
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 7.7e-15 84.7 131 44.3
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 1.7e-14 83.6 137 43.1
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 2.2e-14 83.2 148 39.2
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 3.8e-14 82.4 108 51.9
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 5.0e-14 82.0 149 38.3
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 5.0e-14 82.0 142 37.3
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 1.1e-13 80.9 135 37.8
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 1.4e-13 80.5 160 40.6
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 1.4e-13 80.5 130 40.8
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 1.9e-13 80.1 149 38.9
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 3.2e-13 79.3 163 38.0
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 5.5e-13 78.6 147 38.8
MBI13_g09214_MAGBIO Magnolia biondii HOM05D007266 ORTHO05D005982 9.4e-13 77.8 154 37.7
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 5.2e-11 72.0 159 39.6
ATR0307G108 Amborella trichopoda HOM05D007266 ORTHO05D005982 1.5e-10 70.5 159 32.1
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 1.7e-09 67.0 137 34.3
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 1.4e-08 63.9 63 60.3
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 2.4e-08 63.2 90 43.3
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 7.0e-08 61.6 122 36.1
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 9.1e-08 61.2 41 75.6
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 9.1e-08 61.2 135 36.3
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 2.0e-07 60.1 135 34.1
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 4.5e-07 58.9 65 55.4
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 4.5e-07 58.9 40 72.5
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 4.5e-07 58.9 40 72.5
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 5.9e-07 58.5 135 33.3
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 1.0e-06 57.8 135 32.6
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 1.7e-06 57.0 145 35.9
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 1.7e-06 57.0 48 60.4
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 6.5e-06 55.1 128 35.2
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 8.5e-06 54.7 87 36.8


User provided reference genes

Program Settings