Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0794 Trochodendron aralioides HOM05D008084 ORTHO05D010227 4.8e-171 604.4 299 100.0
TAR636G1366 Trochodendron aralioides HOM05D008084 ORTHO05D010227 1.3e-91 340.5 324 61.7
Dinv12280 Davidia involucrata HOM05D008084 ORTHO05D010227 4.4e-79 298.9 304 56.2
Oeu015570.1 Olea europaea HOM05D008084 ORTHO05D010227 1.4e-74 283.9 322 52.8
Thecc.09G363800 Theobroma cacao HOM05D008084 ORTHO05D010227 1.5e-71 273.9 337 52.5
Cc01_g15320 Coffea canephora HOM05D008084 ORTHO05D010227 2.0e-71 273.5 361 48.2
Aqoxy4G02419 Aquilegia oxysepala HOM05D008084 ORTHO05D010227 2.4e-69 266.5 333 52.0
GSVIVG01024560001 Vitis vinifera HOM05D008084 ORTHO05D010227 1.5e-66 257.3 176 75.0
PSO339G0360 Papaver somniferum HOM05D008084 ORTHO05D010227 1.2e-65 254.2 330 47.3
TWI31G0108 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 8.0e-65 251.5 316 49.7
PSO384G0724 Papaver somniferum HOM05D008084 ORTHO05D010227 1.8e-64 250.4 327 46.8
Manes.02G211900 Manihot esculenta HOM05D008084 ORTHO05D010227 5.7e-63 245.4 326 47.2
Potri.013G157100 Populus trichocarpa HOM05D008084 ORTHO05D010227 4.8e-62 242.3 338 47.0
TWI75G0204 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 2.4e-61 240.0 314 47.8
Potri.019G130200 Populus trichocarpa HOM05D008084 ORTHO05D010227 4.5e-60 235.7 336 47.3
Gohir.A03G023200 Gossypium hirsutum HOM05D008084 ORTHO05D010227 7.7e-60 235.0 305 49.2
Gorai.003G152600 Gossypium raimondii HOM05D008084 ORTHO05D010227 1.3e-59 234.2 311 49.2
HanXRQChr16g0522641 Helianthus annuus HOM05D008084 ORTHO05D010227 1.1e-58 231.1 373 42.1
CANSAT54G2569 Cannabis sativa HOM05D008084 ORTHO05D010227 1.5e-58 230.7 352 44.3
MBI03_g15595_MAGBIO Magnolia biondii HOM05D008084 ORTHO05D010227 1.9e-58 230.3 313 46.3
TWI79G0851 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 3.2e-58 229.6 296 46.6
Gohir.D03G145500 Gossypium hirsutum HOM05D008084 ORTHO05D010227 7.2e-58 228.4 305 48.5
MD03G1051700 Malus domestica HOM05D008084 ORTHO05D010227 7.2e-58 228.4 368 45.1
CiPaw.13G063700 Carya illinoinensis HOM05D008084 ORTHO05D010227 9.4e-58 228.0 354 43.8
FAN11G0725 Fragaria x ananassa HOM05D008084 ORTHO05D010227 1.2e-57 227.6 349 42.7
FvH4_3g40511 Fragaria vesca HOM05D008084 ORTHO05D010227 3.6e-57 226.1 349 42.7
Prupe.6G041100 Prunus persica HOM05D008084 ORTHO05D010227 1.0e-56 224.6 375 43.5
ECA247G2653 Erigeron canadensis HOM05D008084 ORTHO05D010227 1.4e-56 224.2 368 41.8
MD11G1053800 Malus domestica HOM05D008084 ORTHO05D010227 1.2e-55 221.1 384 43.0
Ca_05708_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 1.3e-54 217.6 308 45.1
Eucgr.B04026 Eucalyptus grandis HOM05D008084 ORTHO05D010227 2.2e-54 216.9 160 70.6
FAN25G2941 Fragaria x ananassa HOM05D008084 ORTHO05D010227 3.7e-54 216.1 349 43.0
Medtr5g075400 Medicago truncatula HOM05D008084 ORTHO05D010227 8.3e-54 214.9 319 43.6
Migut.D00819 Erythranthe guttata HOM05D008084 ORTHO05D010227 5.4e-53 212.2 353 43.3
Glyma.02G236300 Glycine max HOM05D008084 ORTHO05D010227 1.7e-51 207.2 286 46.9
Lj6g0015607 Lotus japonicus HOM05D008084 ORTHO05D010227 2.3e-51 206.8 302 45.4
FAN16G3304 Fragaria x ananassa HOM05D008084 ORTHO05D010227 3.8e-51 206.1 349 39.8
Sed0017021 Sechium edule HOM05D008084 ORTHO05D010227 1.5e-50 204.1 315 43.8
Glyma.14G204200 Glycine max HOM05D008084 ORTHO05D010227 1.9e-50 203.8 293 45.7
Glyma.18G052300 Glycine max HOM05D008084 ORTHO05D010227 2.5e-50 203.4 299 45.2
VMungo0540G0456 Vigna mungo HOM05D008084 ORTHO05D010227 3.3e-50 203.0 292 43.8
Psat2g050960 Pisum sativum HOM05D008084 ORTHO05D010227 4.2e-50 202.6 310 42.6
Phvul.006G078700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 7.2e-50 201.8 306 43.5
Lsat_1_v5_gn_9_13820 Lactuca sativa HOM05D008084 ORTHO05D010227 1.2e-49 201.1 277 45.5
VMungo0647G2268 Vigna mungo HOM05D008084 ORTHO05D010227 8.0e-49 198.4 289 46.4
arahy.Tifrunner.gnm1.ann1.QQ3HDC Arachis hypogaea HOM05D008084 ORTHO05D010227 1.8e-48 197.2 312 42.6
Phvul.008G247700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 6.8e-48 195.3 288 45.1
Ca_15056_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 1.5e-47 194.1 295 41.4
PGR102G0866 Punica granatum HOM05D008084 ORTHO05D010227 1.5e-47 194.1 223 52.0
SalBow2G0186 Salvia bowleyana HOM05D008084 ORTHO05D010227 2.0e-47 193.7 314 41.4
LjContig00141g0012818 Lotus japonicus HOM05D008084 ORTHO05D010227 4.4e-47 192.6 297 41.8
arahy.Tifrunner.gnm1.ann1.VW3DCY Arachis hypogaea HOM05D008084 ORTHO05D010227 5.7e-47 192.2 315 42.2
CsaV3_1G004770 Cucumis sativus L. HOM05D008084 ORTHO05D010227 7.5e-47 191.8 330 41.5
MELO3C020485.2 Cucumis melo HOM05D008084 ORTHO05D010227 2.8e-46 189.9 330 41.8
TPR.G18293 Trifolium pratense HOM05D008084 ORTHO05D010227 5.4e-45 185.7 325 41.8
HPP92_028207 Vanilla planifolia HOM05D008084 ORTHO05D010227 8.6e-43 178.3 257 40.5
Medtr3g467150 Medicago truncatula HOM05D008084 ORTHO05D010227 1.9e-42 177.2 244 45.5
TPR.G28793 Trifolium pratense HOM05D008084 ORTHO05D010227 3.6e-41 172.9 279 40.9
Psat5g148440 Pisum sativum HOM05D008084 ORTHO05D010227 4.4e-39 166.0 235 43.4
Cpa.g.sc2.297 Carica papaya HOM05D008084 ORTHO05D010227 2.9e-38 163.3 218 46.3
RcHm_v2.0_Chr5g0073191 Rosa chinensis HOM05D008084 ORTHO05D010227 1.4e-37 161.0 252 42.1
HPP92_025125 Vanilla planifolia HOM05D008084 ORTHO05D010227 7.3e-34 148.7 245 38.0
Cfa011830 Carpinus fangiana HOM05D008084 ORTHO05D010227 4.0e-32 142.9 274 39.8
Zm00001eb419060 Zea mays HOM05D008084 ORTHO05D010227 2.1e-28 130.6 149 50.3
SEGI_31879 Sequoiadendron giganteum HOM05D008084 ORTHO05D010227 3.0e-27 126.7 130 51.5
Rhsim13G0059500 Rhododendron simsii HOM05D008084 ORTHO05D010227 1.6e-25 120.9 259 36.7
Actinidia11623 Actinidia chinensis HOM05D008084 ORTHO05D010227 5.1e-19 99.4 205 38.0
ATR1127G215 Amborella trichopoda HOM05D008084 ORTHO05D010227 1.3e-14 84.7 201 35.3
Mapoly0102s0044 Marchantia polymorpha HOM05D008084 ORTHO05D010227 1.1e-10 71.6 170 30.6
HanXRQChr03g0074351 Helianthus annuus HOM05D000833 ORTHO05D000969 4.4e-07 59.7 221 26.2
Hma1.2p1_0471F.1_g159380 Hydrangea macrophylla HOM05D000833 ORTHO05D000969 5.8e-07 59.3 91 37.4
Actinidia23166 Actinidia chinensis HOM05D008084 ORTHO05D010227 7.6e-07 58.9 175 33.1
Cc04_g09310 Coffea canephora HOM05D000833 ORTHO05D000969 3.8e-06 56.6 55 43.6
Manes.14G173000 Manihot esculenta HOM05D000833 ORTHO05D000969 4.9e-06 56.2 102 34.3
Potri.012G042500 Populus trichocarpa HOM05D000833 ORTHO05D000969 8.4e-06 55.5 97 35.1


User provided reference genes

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