Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.6e-194 682.6 349 100.0
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 4.7e-109 398.7 349 65.6
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 6.4e-106 388.3 371 59.8
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 1.4e-105 387.1 347 63.4
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 6.2e-101 371.7 366 59.0
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 8.9e-100 367.9 347 59.9
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.0e-99 366.7 352 59.7
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 9.9e-99 364.4 354 59.0
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.3e-98 364.0 353 58.4
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 8.3e-98 361.3 361 58.7
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 1.9e-97 360.1 359 58.2
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 1.9e-97 360.1 354 57.3
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 7.8e-96 354.8 357 55.7
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 1.0e-95 354.4 356 58.7
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 2.3e-95 353.2 355 58.9
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 3.9e-95 352.4 363 55.6
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 5.1e-95 352.1 355 56.1
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 8.6e-95 351.3 376 57.2
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 8.6e-95 351.3 369 56.9
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 1.1e-94 350.9 366 56.6
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.9e-94 350.1 366 57.1
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 5.6e-94 348.6 353 58.1
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.2e-93 347.4 365 54.8
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 6.2e-93 345.1 369 55.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 1.4e-92 344.0 362 55.0
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.8e-92 343.6 377 54.1
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.3e-92 343.2 370 54.1
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 1.5e-91 340.5 362 55.2
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.7e-90 337.0 365 52.9
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 2.9e-90 336.3 361 56.2
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 3.8e-90 335.9 367 53.4
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 8.4e-90 334.7 363 55.1
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.1e-89 334.3 363 52.9
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 4.1e-89 332.4 380 54.5
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 9.2e-89 331.3 381 53.0
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.2e-88 330.9 363 54.0
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.2e-88 330.9 458 47.8
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 1.2e-88 330.9 352 54.0
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 3.5e-88 329.3 367 54.2
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 3.5e-88 329.3 370 52.7
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 3.0e-87 326.2 365 51.8
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.1e-87 325.5 367 53.7
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 8.6e-87 324.7 363 49.9
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.9e-86 323.6 357 54.6
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 9.6e-86 321.2 379 50.4
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 3.6e-85 319.3 403 48.1
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 8.1e-85 318.2 350 53.4
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 1.4e-84 317.4 366 52.2
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 1.8e-84 317.0 369 50.7
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 5.2e-84 315.5 380 50.0
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 9.0e-84 314.7 367 50.4
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 4.4e-83 312.4 360 50.8
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 9.9e-83 311.2 358 50.3
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 1.3e-82 310.8 358 50.3
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 2.9e-82 309.7 382 48.4
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 2.9e-82 309.7 359 50.7
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 2.9e-82 309.7 361 50.4
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.9e-82 308.9 357 50.4
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 6.4e-82 308.5 371 49.3
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 5.4e-81 305.4 396 50.8
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 5.4e-81 305.4 272 60.3
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 9.3e-81 304.7 392 48.2
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.5e-80 302.8 408 47.5
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 4.6e-80 302.4 370 51.1
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 2.3e-79 300.1 372 51.1
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 6.6e-79 298.5 347 51.0
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 8.7e-79 298.1 390 49.5
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 7.3e-78 295.0 375 48.5
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 1.6e-77 293.9 381 49.6
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 1.8e-76 290.4 359 50.1
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.9e-74 283.1 232 63.4
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 4.9e-74 282.3 369 49.6
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.1e-73 281.2 252 60.7
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.1e-73 281.2 272 57.0
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 2.1e-72 276.9 360 49.2
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.0e-71 274.6 361 45.7
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 9.6e-70 268.1 373 48.3
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.2e-67 261.2 230 63.0
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 4.5e-67 259.2 353 47.6
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 2.2e-66 256.9 366 46.2
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 4.9e-66 255.8 367 43.6
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 9.3e-65 251.5 474 40.9
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 6.7e-63 245.4 259 54.1
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 2.5e-62 243.4 256 55.1
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 1.6e-61 240.7 316 48.7
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 3.7e-61 239.6 257 51.0
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 5.3e-60 235.7 218 58.3
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 7.6e-59 231.9 262 52.3
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 1.3e-58 231.1 230 54.8
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 6.5e-58 228.8 338 43.8
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 1.1e-57 228.0 340 44.4
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.2e-57 226.1 239 55.6
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 1.6e-56 224.2 281 48.8
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.0e-55 219.9 244 54.5
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 2.8e-53 213.4 251 48.6
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 4.1e-52 209.5 148 73.0
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 5.3e-52 209.1 274 46.4
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.3e-50 204.5 248 48.8
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 2.1e-48 197.2 243 49.0
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 6.1e-48 195.7 294 44.9
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 8.7e-47 191.8 234 49.6
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 9.7e-46 188.3 275 46.2
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 6.3e-45 185.7 233 47.6
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 8.2e-45 185.3 378 34.9
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 3.1e-44 183.3 229 43.2
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 2.0e-43 180.6 371 36.4
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 1.1e-36 158.3 335 34.9
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 3.4e-35 153.3 196 50.0
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 5.0e-34 149.4 152 56.6
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 1.8e-28 131.0 199 44.7
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 7.0e-28 129.0 153 52.9
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 7.0e-28 129.0 153 52.9
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 3.5e-27 126.7 211 43.1
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 7.2e-25 119.0 94 64.9
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 4.0e-23 113.2 92 65.2
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.5e-22 111.3 188 42.0
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 5.9e-19 99.4 236 33.1
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.2e-18 97.4 64 73.4
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 2.7e-16 90.5 112 45.5
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 1.4e-15 88.2 62 72.6
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.1e-12 78.6 63 61.9
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 2.0e-11 74.3 92 43.5
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.9e-09 67.8 75 53.3
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 3.0e-07 60.5 53 52.8
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 3.0e-07 60.5 53 52.8


User provided reference genes

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